Ahey005183.1
Basic Information
- Insect
- Acromyrmex heyeri
- Gene Symbol
- Hr39
- Assembly
- GCA_017607565.1
- Location
- JAANIB010006769.1:201288-205514[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.9 5.7e+03 -4.6 8.5 127 161 38 70 18 96 0.56 2 4 2.4 7.4e+03 -5.0 8.7 83 163 304 392 225 427 0.59 3 4 3 9.1e+03 -7.7 9.7 76 151 433 512 398 537 0.41 4 4 5.2e-75 1.6e-71 240.9 0.6 1 408 604 995 604 995 0.74
Sequence Information
- Coding Sequence
- ATGTCAGAGCAAAACGGGCCCAGTGAGGGCCCAGGGCCAGGGCCCGGTTCGGATTCGAACTGGTGGCCAAGCACGCAGACTTGGAAGTCGTCAGCAGCCGCCTCGTCGTCGACTTCATCGACTTCATCCACTTCAGCGTCCGTTTCTGTCTCCTGCTCTGCGTCCAGCTCGTCGACGAGCTCCTCCACCTCGATCAACTCGTCCACGACCTGTTGTCCCTCATCGTGTATCGGCGTGTCCTGCACGATGAGTCCAAGCCGTTCCACGGAAACGGGGAAAAATGTATCCGTCACTACTATTAACGTACCGCCCAATCAAGAAATGCATGATGCTAAAGGAGTATGTAAATATCTCGGGGGGCAAAACGGCGTGACAGTATCGGTGGTATCGACCTCGGTACTGGGATGTGGAAACGCGAATGCCGTCCCGACAAGCGGAATCTGCACGAATACGGGGCCGCATAGTATCGGTATCGGAATTGGTGGCATCCTCGCTGCGAACGCAGCCGATATCGACGATCCTGAGGACAGCGACGGCGAGATCAGTAAGATTGACTTTCGAGGTGTCAATCTACGTTCGAAGAAGAAACGCGACGTATCGAGTAATCAGAATGGCGACAAGATCGGTGACGGAGAAGCAAACGGCGACGGCGGGGGTTGCTGCGATGATAATTCGCAACAGCAACCTGAGAGGCCCATGTCATGGGAGGGTGAATTATCGGATCAAGAAATGTCTTCCAATACAATTACTAATCAGGATCACAATGAGGAAACGTCTATGGAGGGAGTTCAAGTATGCAGTACGAGTCCTGGGCCTATGGAACAGAAGTTTCCTATTAAGTCAGAGCCGGATTTTCGATCTAGTCCAGGTTTCACAATAGGATCCTTTCACGATGGTGGATTGCCTATGACACACAATCAACAATTgcaacaacagcaacagcaacaacgCGGTATCGAAAACCTCGAACAAACTCAACAGAGCGACCTACCACTTCTTGTAGGCAAGCTTCTCGGTGGATACAACAATTCAACGCCTAATCATAGTCCCGTCCTCAATCCGCGACATCATCTAACTAAACACAGTCATACTAGATCGCAGGTGCCGTCACCAGATTCCGCCATTCATTCTGCGTATAGCGTCTTCAGTTCACCGACACAGAGTCCTCACGCAGCACGACACTCCGCCCTAGGAGCGGGTAGTCCGATACCCTCCTCGTCATTGTCCCTCTCTCGACACAGCTTCAACAACTCGACTTCTTCGTTATCTCTATCGTTGTCGCATTCGCTTTCGAGGAACAATTCTGACGCTTCCAGTAGCTGCTACAGCTACGGTTCGCTTAGCCCGCCTACGCATTCACCCGTCCAGCAGCCGAGACATCCGCATTCACATTCACAACATCATCAGCATCAAGTGGCGCAAGGTAGTCCGCTGCATCTACCAGCCTCGTCTGCAGTTGCCGCACATCATTACTCGTCCTCTTCCGTACCAGGTTCGGAATTGTCGCCAGACGGCCATCCCGTTGCGGAAGATCAGGAAGACTGTAGGTTACCCTCGGCGCCATCGGGTATCTCCACCAGGcaacaattaattaacagtCCCTGCCCGATTTGCGGTGACAAGATAAGCGGCTTCCATTATGGCATCTTCTCGTGTGAATCGTGCAAGGGATTTTTCAAGCGCACCGTCCAGAATCGTAAGAACTATGTGTGCCTTAGAGGCGCAGGTTGTCCGGTCACCGTGGCCACGAGGAAAAAGTGCCCAGCCTGCCGCTTCGATAAGTGCCTCAATATGGGTATGAAGCTCGAGGCGATCAGGGAGGATCGTACCAGAGGCGGTAGAAGCACTTATCAGTGTACCTATACTCTGCCAAATCTCGTTGGTAGTCCTGCTGGTATGACCAGTGAAAAAATGACGACGGCAGGCAATTGCAGCCCGGCACCGGCCGGTAGCGAGCATCATTATTCTGTTAGATATCATTCAAATCATTCTTACAAGATGCAAGTAGTACCTCAACTTTTGCAAGACATCATGGATGTAGAACATCTTTGGCATTATAACGATAACGATCGGATAAGCGGTAGTGGAGGAATACTTGGAAGTGTAAGGAATACCGGTAGTGACAGTCTGCTGTTCAGTGGACCCGGAAGTGGTCCAGCGCTCAGTGGCACTGGAACTGCGACCAGTATTGGCGTCGGAAACAACGGAGGTGCAGTGGAATGTTCGTCGAATGACTCTAGCAATGTCGATACTAATAGCAGAAGGGGAGAAACGGCGAGCCCCACTGATTCGATCTTAACGGGGGCGTCCGATCAACATTCCACAAATGGCAATACCactaataatagtaattctCAAATTGCCAGTAATTCCAACGGTAATTCAGCGCAGCATCCAGACTTTCTATCTAATCTGTGCAACATCGCGGATCATCGGCTTTATAAGATCGTCAAGTGGTGCAAAAGTTtgccattatttaaaaatatttcaatcgaTGATCAAATCTGTTTGTTGATTAACTCTTGGTGTGAGCTACTGCTTTTCTCTTGCTGTTTTCGCAGCATGAGCACTCCCGGTGAGATAAGAGTGTCTCTCGGCAAGTCGATTACTTTAGAACAGGCAAGACAGCTTGGTTTAGCGACTTGCATCGAGAGGATGCTCACTTTTACCAACAATCTGCGAAGACTGAGAGTAGACCAATATGAATATGTTGCAATGAAGGTGATCGTGCTGTTAACGTCCGATACAAGCGAATTAAAAGAGCCTGAAAAGGTCAGAGCTTCTCAAGAAAAGGCACTTCAAGCACTCCAGCAATATACAATCGCGAGGTATCCAGAAATGCCTGCCAAATTTGGTGAATTATTGTTGAGAATTCCAGATCTGCAAAGAACATGTCAAGCAGGAAAAGAATTGCTCAGTGCAAAACGTGCCGAGGGAGAAGGCAGCTCGTTTAAccttttaatggaattattgAGAGGAGATCAC
- Protein Sequence
- MSEQNGPSEGPGPGPGSDSNWWPSTQTWKSSAAASSSTSSTSSTSASVSVSCSASSSSTSSSTSINSSTTCCPSSCIGVSCTMSPSRSTETGKNVSVTTINVPPNQEMHDAKGVCKYLGGQNGVTVSVVSTSVLGCGNANAVPTSGICTNTGPHSIGIGIGGILAANAADIDDPEDSDGEISKIDFRGVNLRSKKKRDVSSNQNGDKIGDGEANGDGGGCCDDNSQQQPERPMSWEGELSDQEMSSNTITNQDHNEETSMEGVQVCSTSPGPMEQKFPIKSEPDFRSSPGFTIGSFHDGGLPMTHNQQLQQQQQQQRGIENLEQTQQSDLPLLVGKLLGGYNNSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPIPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHPHSHSQHHQHQVAQGSPLHLPASSAVAAHHYSSSSVPGSELSPDGHPVAEDQEDCRLPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPNLVGSPAGMTSEKMTTAGNCSPAPAGSEHHYSVRYHSNHSYKMQVVPQLLQDIMDVEHLWHYNDNDRISGSGGILGSVRNTGSDSLLFSGPGSGPALSGTGTATSIGVGNNGGAVECSSNDSSNVDTNSRRGETASPTDSILTGASDQHSTNGNTTNNSNSQIASNSNGNSAQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLTFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01267641;
- 90% Identity
- iTF_00885153;
- 80% Identity
- iTF_00016068;