Basic Information

Insect: Acromyrmex echinatior
Gene Symbol: PAXBP1
Assembly: GCA_000204515.1
Location: NW:2108408-2115211[+]

Transcription Factor Domain

TF Family: GCFC
Domain: GCFC domain
PFAM: PF07842
TF Group: Unclassified Structure
Description: This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.4e-31 2.3e-27 95.5 3.0 2 272 309 518 308 520 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.4e-31	2.3e-27	95.5	3.0	2	272	309	518	308	520	0.91

Sequence Information

Coding Sequence: ATGACTGTCAACACTGAAGCAcgtgataaagaaaaaaggagagaagCATTTCTTGCTTCTCAAGTTCCATTAAAATtttcagATAATGAAAGTGAGCACGAaaacgaagaagaagaatGGGAAGCTCAACAAATACGAAAAGGTGTAACCGGTGCTCAgATTGCAGCAGCACAGCAAGATTCTATGTTGCAACAACAATATACAATGGGCATGAatgttaatcaaataattggGTCTGGTGTACCTTTAGAAATGGTATTAATGCCTGCACCACCACCGCCACCATCTATTCAACCACCAGATCCAACAAAAATCGTACCTGTTACTCCGCAAGAAGTTGTAAACAGGATGCGCACAAGgtTGGACAATTTGAAAGAGGTGCATAGACGGCATCAGCAAGATCAGGAGCGTTTAGAAGGAGAATTACAACAAACCATAAAAGAATTGGACGAAAGTGAAGTTCGTACGCCGCATTATGCACAACGCTTCAGATATTACCAAGAGTTGCGTGGGTATGTCACTGACTTGGTAGAGTGTCTTGATGAGAAGCTTCCCCTGGTCATCGACTTGGAGCAACGCTGGTTAGATCTATATGGTGAACGTTCAGTCGAATTGATGGAACGAAGACGACAAGACACGAGAGATCAGGCGGAAGAAATAACTACTACAGCAAGAGGTCAAGCCATGAGAAGAGGACCAGAAGTAGAAATACACGTACGACGAGCTACAGAGAGAGAAGGTAGAAGAGCCCGTCGTAGAAGAGCAAGAGAATTAGCATCAAATATTCCAAAGCACATTGATGGCATGTCTAGTGACGACGAAGTTACTGAGCAACAAAATCTTGTATTTAAGCAAGCGAAAGatgaaatcgataataattgtaaagatatattttctgatGTTATGGAAGAATATTGTACAGTACGTGGTATCCTTTCAAAATTCGAGTCATGGAGAGAAACAGACATGGATGCCTACACAGAAGCTTATGTATCGTTGTGTTTACCTAAAATTATTTCGCCTATTATCAGATTACAACTACTTACTTGGAATCCGATTATGGAAAGCGCTGATCTAGAAAGAACAAAGTGGTATAATACATTACTTCTGTACGCTTTAGATAGTAAAGAGACAGAAGAATCATTGAAACGAGATCCAGATGTTAGATTAATACCATccacaattgaaaaaattgtgataCCAAAATTGACATctaTTATTGAAAAGATATGGGATCCAATGTCAACGTCTCAGACGTTACGTCTCGTTGGAACTATAAATCGATTGATAAAGGAATATCCTAATTTAAATGATAGCAGTAAACAGTTAGAAACTTTATTCAACgctattttagataaaattaaagctgCGATTGAAAATGATGTTTTCATACCTATTTTCCCAAAACAaGTTTGGGATACAAAACATCAATTCTTCCAAAGACAATTTGCGATGGCTGTTAAATTATTGCGCAATTTATTAAGTTGGCAAGGTATTCTTGGGGAtatacagttaaaaaatttggcaCTTGGTTCGCTTTTGAATCGTTATCTGCTCGCTGGATTACGCGTTTCTTGTCCAACTGACGCTTTATTCAAGGCAAACATgATTATGAGTACGCTACCAAGAGCATGGCTGCAAGGAGAAACTATTGAACACCTCAAAATGTTTGCCACACTTATTCAACAACTTAGCGAACAATTGGATCAGGCAAACCCTGCACATaaTGAAGCCTGGGAATACGCCAAgtccattttgaaaataattaaacccTTATAA
Protein Sequence: MTVNTEARDKEKRREAFLASQVPLKFSDNESEHENEEEEWEAQQIRKGVTGAQIAAAQQDSMLQQQYTMGMNVNQIIGSGVPLEMVLMPAPPPPPSIQPPDPTKIVPVTPQEVVNRMRTRLDNLKEVHRRHQQDQERLEGELQQTIKELDESEVRTPHYAQRFRYYQELRGYVTDLVECLDEKLPLVIDLEQRWLDLYGERSVELMERRRQDTRDQAEEITTTARGQAMRRGPEVEIHVRRATEREGRRARRRRARELASNIPKHIDGMSSDDEVTEQQNLVFKQAKDEIDNNCKDIFSDVMEEYCTVRGILSKFESWRETDMDAYTEAYVSLCLPKIISPIIRLQLLTWNPIMESADLERTKWYNTLLLYALDSKETEESLKRDPDVRLIPSTIEKIVIPKLTSIIEKIWDPMSTSQTLRLVGTINRLIKEYPNLNDSSKQLETLFNAILDKIKAAIENDVFIPIFPKQVWDTKHQFFQRQFAMAVKLLRNLLSWQGILGDIQLKNLALGSLLNRYLLAGLRVSCPTDALFKANMIMSTLPRAWLQGETIEHLKMFATLIQQLSEQLDQANPAHNEAWEYAKSILKIIKPL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01423655;
90% Identity: iTF_01421553;
80% Identity: -