Arep024916.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Acrobasis repandana
Gene Symbol
nfxl1
Assembly
GCA_963576875.1
Location
OY756238.1:1518607-1521084[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 1 3.5e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 21 0.032 1.1e+03 0.6 0.4 4 10 169 175 168 175 0.96
3 21 1.4e-07 0.0047 17.8 16.1 3 19 186 202 185 202 0.95
4 21 2.1e-09 7.3e-05 23.6 13.1 1 19 237 255 237 255 0.93
5 21 0.38 1.3e+04 -2.8 2.2 6 10 280 284 279 284 0.83
6 21 3.8e-10 1.3e-05 26.0 12.1 1 19 290 308 290 308 0.99
7 21 4e-07 0.014 16.3 17.3 3 19 345 361 344 361 0.93
8 21 1 3.5e+04 -5.3 2.2 5 10 384 389 384 389 0.88
9 21 3e-06 0.1 13.5 18.3 1 18 395 412 395 413 0.97
10 21 2.5e-10 8.7e-06 26.6 13.0 1 19 422 440 422 440 0.99
11 21 1.4e-05 0.49 11.4 5.5 9 19 488 498 486 498 0.90
12 21 0.001 36 5.4 8.6 1 12 508 518 508 518 0.96
13 21 0.19 6.5e+03 -1.8 3.3 14 18 547 551 547 552 0.85
14 21 0.064 2.2e+03 -0.3 0.4 7 12 567 572 567 572 0.86
15 21 1e-05 0.35 11.9 4.7 1 11 588 598 588 599 0.97
16 21 0.85 2.9e+04 -3.9 1.7 15 18 613 616 613 617 0.87
17 21 0.00013 4.6 8.3 16.3 3 18 629 645 628 646 0.82
18 21 1 3.5e+04 -6.5 3.4 9 13 652 656 652 656 0.71
19 21 0.71 2.4e+04 -3.6 0.9 5 10 663 668 663 668 0.91
20 21 2.4e-05 0.85 10.6 12.8 1 18 687 706 687 707 0.88
21 21 0.93 3.2e+04 -4.0 1.2 6 10 737 741 736 741 0.86

Sequence Information

Coding Sequence
atggCTCGGCGGTACCGAGACGCGGCTGCAAAGTTGCAGCAAAACGTGCAGAAACATTTGAAAGTGATGAAGGATCTTTCTTCTTCAGAAGACGAGGAGCCATTTGAGTCCAGTGTCCTCGAAGGAGTGTTCCAGAGTTACTGGAGGGGCGGCGGAGATTCTCATTTACTAAATCGAACGAGAAACTTATTAGAAGAGGCTATAAGTGGCCGGCTAATTACGTGTCTCATTTGCATAGGGAGTATTAAAAGAGCTGATGCTATTTGGAATTGTGATCACTGCCACTGCCATTTTCACCTCTCCTGCATCCAGAAATGGGCAAACGACAGCATTAGCTTGAGAACGGAGGACCCGCAAGGGCCTATAGCTGTTTTTAAGCCTAAAAAAGTTGAATGGTGTTGCCCGAAGTGCCGGCATTCGTATTCTAAGGAAGAAATACCTCGTAAATACCGTTGTTTTTGTGGAAAAACTCATGACCCGCCGCACCATCCTTGGTTGATACCTCATTCTTGTGGAGAAGTCTGTGAAAAGAGGTTATCTTTAGGAGATAATTGTAAACATAAGTGTCTTGTTCTCTGTCACCCTGGCCCATGTCCTCCATGCCCACAGACAGTTGACGGAGTATGTTACTGTGAGAAAGAACGGAAGAGAGTCCGATGCAGCGCTGCCAAATGGTCTTGTGGACAACAGTGTAAGAAAACTTTATTCTGTAACTCGCACAGGTGTGAAAATGTCTGCCATGAGGGTGATTGTCCTCCGTGTACATACACAAGCGTCCAGCCATGCCAGTGTGGCAGTGAGACGGTTAAAAGACTGTGCAATGATCCTGTTTGGCAGTGTCAGAAACCTTGCAACAAACCATATTCTTGCGGCTATCATAAGTGTGAAAAAGTGTGTCACTTTGGACCATGTGGGTCGTGTCCCAACTCTGGCACCCGATCTTGCCCCTGCGGAGCCAACCAACGCTTCGTACAATGCCCTGATGTTATGGAAACATGTCTTGGAACATGTAATAAAAAGCACGAAGATTGTGAACATACTTGTCCGGAAAAATGTCATAAAGGATCTTGCCCCCCATGTCAAGTGCTGATTCAAAAGAAGTGTTTCTGTTCAGCTCATGTCCGTTCCCTTCCATGTGGCAAAGATTATAAATGCGAAACAAAATGCCGAGGTATGAGGCCTTGTGGCAAACATGGCTGTGCGCGGAAATGCTGCAATGGAAACTGTCCACCTTGTGAGAAAATATGTGACAAGCCACTGCATTGTGGCCGGCATAAATGCACCATGGTCTGCCATCGCGGCCCTTGCTACCCTTGTCCTCTAGAATCCAAAGTAACTTGTAGGTGTAAAGAAACATATGTAACAGTGCCTTGTGGACGCGAGAAGCATACAAAACCACCAAAATGTAGCCTCCTTtgcaaaatgaaatataaatgtGGACATATGGAAGAGAACAAGCATGTTTGCCATTTTGGAGACTGCCCTCCTTGCAGAGCCATATGCTACAAGACATACCCAAAATGTGGTCACGAATGTAAGGCAACTTGTCATGAATTTGTGGCTGTTGTCTTTAAGCAAGTAGCAAAGCCTGCGACACCTTGGGAGATAGAACCTCCAAAGACCAAGATAATGAATTTAGAATGTCCTCCGTGTGAGACACCTGTCCCTATCATCTGCTTTGGAGAACATGAGTCAGAGCAACAACCATGTCATTCAGCTAAACGTAGATGCTGCGGTCGACAGTGTGGCCGTCCATTAGCTTGTGGCAACCACTCTTGCACCTTACTCTGTCATCTTAACTTTTCCGATCCTGGTTATCCAAATGTGCCTTATATTTGCAAGCCATGTGATAAGGAATGCCTTGTACCCCGTCCAGTTAAATGTACACACAAATGTTACAAAAAACAATGTCATCCTGGGCCTTGTCCTCCGTGTGAGATTCTAGAACGGATTCCATGTCACTGTGGTGTAACAGAGGTATATCTCCGCTGCAGAGAGTTGTGTGAAGCTACCGAAGAAATGTTGTCTTGTAAGCAACAGTGTCCTAAGAATTTGATTTGTGGACACCGTTGCCGTAATAACTGTCACTCTGGAGAGTGCGGTATTGGACAGACATGTACTAAGAAGACAAAAGTACAATGTGCCTgtgggaatttgaaaaaggaattTCCTTGTAATGTAGTCAAGAGTAGAGATGCAAAGGTTGAGTGTGATGAAACATGCAAAGCTAAAAAGATTGCTACAAAATtagagaaagaaaaagaagcaTTGAGACGTAAGGAGATGGAAGAGGAAAGGAACCGTAGAGAATTAGCAGAGTATGAATGGAAGCTAAgtggaaagaagaagaagtacaaaGAGAAAAAGGTAGTTGCTTATGTTGACAATAGAAACTGGTTGCAGAAGTATTGGATTCCTATTTTAACTGTTTTGATAGCTATCTCGGCTGCTGTTATATATTGTGTACTTTATGCATAA
Protein Sequence
MARRYRDAAAKLQQNVQKHLKVMKDLSSSEDEEPFESSVLEGVFQSYWRGGGDSHLLNRTRNLLEEAISGRLITCLICIGSIKRADAIWNCDHCHCHFHLSCIQKWANDSISLRTEDPQGPIAVFKPKKVEWCCPKCRHSYSKEEIPRKYRCFCGKTHDPPHHPWLIPHSCGEVCEKRLSLGDNCKHKCLVLCHPGPCPPCPQTVDGVCYCEKERKRVRCSAAKWSCGQQCKKTLFCNSHRCENVCHEGDCPPCTYTSVQPCQCGSETVKRLCNDPVWQCQKPCNKPYSCGYHKCEKVCHFGPCGSCPNSGTRSCPCGANQRFVQCPDVMETCLGTCNKKHEDCEHTCPEKCHKGSCPPCQVLIQKKCFCSAHVRSLPCGKDYKCETKCRGMRPCGKHGCARKCCNGNCPPCEKICDKPLHCGRHKCTMVCHRGPCYPCPLESKVTCRCKETYVTVPCGREKHTKPPKCSLLCKMKYKCGHMEENKHVCHFGDCPPCRAICYKTYPKCGHECKATCHEFVAVVFKQVAKPATPWEIEPPKTKIMNLECPPCETPVPIICFGEHESEQQPCHSAKRRCCGRQCGRPLACGNHSCTLLCHLNFSDPGYPNVPYICKPCDKECLVPRPVKCTHKCYKKQCHPGPCPPCEILERIPCHCGVTEVYLRCRELCEATEEMLSCKQQCPKNLICGHRCRNNCHSGECGIGQTCTKKTKVQCACGNLKKEFPCNVVKSRDAKVECDETCKAKKIATKLEKEKEALRRKEMEEERNRRELAEYEWKLSGKKKKYKEKKVVAYVDNRNWLQKYWIPILTVLIAISAAVIYCVLYA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00737154;
90% Identity
iTF_01302988;
80% Identity
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