Basic Information

Insect: Acrobasis consociella
Gene Symbol: -
Assembly: GCA_963555685.1
Location: OY743115.1:13498823-13518299[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 3.6e-05 0.0031 18.8 2.9 1 23 419 441 419 441 0.97

2 20 0.0023 0.2 13.2 1.0 1 20 447 466 447 469 0.94

3 20 2.6e-05 0.0022 19.3 5.6 1 23 488 510 488 510 0.98

4 20 0.00012 0.01 17.2 4.1 1 23 516 538 516 538 0.99

5 20 4.3e-05 0.0037 18.6 5.3 1 23 544 566 544 566 0.97

6 20 1.2e-05 0.00098 20.4 7.9 1 23 572 594 572 594 0.97

7 20 6.2e-07 5.3e-05 24.4 3.0 1 23 600 622 600 622 0.98

8 20 0.00012 0.011 17.1 6.7 1 23 628 650 628 650 0.97

9 20 0.00012 0.01 17.2 6.5 1 23 656 678 656 678 0.97

10 20 6e-07 5.1e-05 24.4 1.9 1 23 684 706 684 706 0.98

11 20 6.1e-05 0.0052 18.1 7.9 1 23 712 734 712 734 0.98

12 20 7e-05 0.006 17.9 7.8 1 23 740 762 740 762 0.97

13 20 1.7e-06 0.00014 23.0 5.2 1 23 768 790 768 790 0.98

14 20 8.6e-06 0.00073 20.8 6.2 1 23 796 818 796 818 0.97

15 20 2.8e-05 0.0024 19.2 7.3 1 23 824 846 824 846 0.97

16 20 3.7e-06 0.00032 21.9 6.0 1 23 852 874 852 874 0.98

17 20 4.4e-05 0.0038 18.5 8.3 1 23 880 902 880 902 0.97

18 20 8.5e-06 0.00072 20.8 5.1 1 23 908 930 908 930 0.98

19 20 0.00066 0.057 14.8 0.3 1 23 937 959 937 959 0.96

20 20 0.34 29 6.3 4.2 1 23 968 990 968 990 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	3.6e-05	0.0031	18.8	2.9	1	23	419	441	419	441	0.97
2	20	0.0023	0.2	13.2	1.0	1	20	447	466	447	469	0.94
3	20	2.6e-05	0.0022	19.3	5.6	1	23	488	510	488	510	0.98
4	20	0.00012	0.01	17.2	4.1	1	23	516	538	516	538	0.99
5	20	4.3e-05	0.0037	18.6	5.3	1	23	544	566	544	566	0.97
6	20	1.2e-05	0.00098	20.4	7.9	1	23	572	594	572	594	0.97
7	20	6.2e-07	5.3e-05	24.4	3.0	1	23	600	622	600	622	0.98
8	20	0.00012	0.011	17.1	6.7	1	23	628	650	628	650	0.97
9	20	0.00012	0.01	17.2	6.5	1	23	656	678	656	678	0.97
10	20	6e-07	5.1e-05	24.4	1.9	1	23	684	706	684	706	0.98
11	20	6.1e-05	0.0052	18.1	7.9	1	23	712	734	712	734	0.98
12	20	7e-05	0.006	17.9	7.8	1	23	740	762	740	762	0.97
13	20	1.7e-06	0.00014	23.0	5.2	1	23	768	790	768	790	0.98
14	20	8.6e-06	0.00073	20.8	6.2	1	23	796	818	796	818	0.97
15	20	2.8e-05	0.0024	19.2	7.3	1	23	824	846	824	846	0.97
16	20	3.7e-06	0.00032	21.9	6.0	1	23	852	874	852	874	0.98
17	20	4.4e-05	0.0038	18.5	8.3	1	23	880	902	880	902	0.97
18	20	8.5e-06	0.00072	20.8	5.1	1	23	908	930	908	930	0.98
19	20	0.00066	0.057	14.8	0.3	1	23	937	959	937	959	0.96
20	20	0.34	29	6.3	4.2	1	23	968	990	968	990	0.98

Sequence Information

Coding Sequence: ATGAATCCTGAGCACCACAATATCAATACGGGTGGTGGCCAGCCTCCTGGAAGCTCTGAGTCTCAAAGTCAGAGGATTCAGAATGCCCAGCAACAGCAGGGTAGTAATTTGCCCGCCACAACTTCTGCTACTGATTTACGTGTGAATTCCGTAAATTCGGCTGCTGTGAACGTCGCTTTGTCTAGCGTAGCCAAATACTGGGTGTTTACAAATTTGTTTCCTGGACCCATACCACAAGTCTCAGTATATGGACTCCCTACAGGCACGAGAATCGAAAATGGAAAACCTGTTCAgGATCTCGGACAGGCGCATGCCAGCATTCTCAATGGAGATCCAAACATCATTCTTGGGCACCACACGGGACAACCACAGGTCACTGTGTCTGCTGCTCAGCAGATACCAGTATCTCAAATTATTGCCGCTCAATCTGGACAAACTCATGaAGCACTAGTGGCTCACAGTCAACAACAAGAGTTGGCAGCTCAACAGGCTTCAGGCGGATCCCAGGTCACAGCTACCCATCAGCAGGTACCCAATAGTCGGGTCGAGTTTGTACAACACCATAACATTGATATGGGGCATCATTCACAACAGCATTTGATGCAGCAGCAACTGATGGCTGGAGCGCGTCAAGAACACGCAAATCAGCAGATCCAACTGACTGTCAGCGAAGATGGTATAGTGACAGTTGTGGAACCTGGAGCCGGAAAGCTAGTGGACAAAGAAGAGCTCCATGAAGCCATCAAGATGCCCACAGACCACCAGACACTTACTGTTCATCAATTGCAGCAAATTGTTGGACAGCAGGTAATAGACAGTGTCGTCCGCATTGAGCAAGCCACAGGTGAGCCGGCCAACATTCTAGTGACGCACAATCCGGACGGTACGACGTCTATAGAAGCGAGTGCCGCGGATCCACTCATAGTGAAAGACGAGAAGAATTCTGGAAAGATTGAAACGGCGCAGTTCGCCATACCGGCAGATATAAAGGACATTAAAGGAATTGACTTGAAGAGTGTCAGCGCAATGGGCATGGAGGGAGCTGTAGTGAAGATATCTGCTGGCGCCTCGGACCATGATCTCCACGCGATGTACAAAGTGAATGTGGAAGATCTGTCACAGCTTCTGGCCTACCATGAGGTATTTGGGAAGCTGAACACCGACGGGCAGCCACAAACAAAAGTGATCAGCGAAGTGGAGGTAGAGGCAGGCACAAGCGCCGCCATGTCCGAGTCCGAGTCATCACCGGGACAGCATTCATGCGATATTTGTGGGAAAAGCTTCCAGTTCCGATACCAACTCATTGTTCATAGACGATACCATGGCGAGAGCAAGCCGTTCACCTGTCAAGTATGCGGCTCTGCATTCTCCAACCCTGTAGAGCTGTCCAGGCACGGAAAATGCCATCTTGCCGGCGACCCAGCCGAGCGCAACGCCAAGAGATTGACTCAAGACAAACCCTATGCTTGCACAACTTGCCATAAAACTTTCTCGCGTAAGGAGCATCTGGACAACCATGTTCGCAGCCACACTGGAGAGACGCCTTACAGATGCGAGTTCTGCGCCAAAACCTTCACTCGTAAAGAGCACATGGTGAATCACGTCCGCAAGCACACGGGAGAGACTCCGCACCGATGCGAGATCTGTAAGAAGAGCTTTACAAGAAAGGAGCACTTCATGAATCACGTCATGTGGCATACAGGTGAAACGCCGCATCATTGTCAAATATGCGGCAAGAAGTATACTAGGAAGGAGCATTTAATGAATCATATGAGATCGCACACAAACGATACGCCCTTCCGATGCGAACTGTGCGGCAAGTCGTTCACGAGAAAGGAACACTTCACCAATCACATAATGTGGCATACGGGCGAGACGCCCCATCGCTGTGACTTTTGTTCGAAGACGTTCACTCGCAAGGAGCATCTACTGAATCACGTGCGACAGCATACGGGCGAGTCCCCGCATCGCTGCAACTTCTGCTCAAAGTCGTTTACGAGACGAGAACACCTCGTGAACCACGTGAGACAACACACTGGAGAAACACCCTTCCAGTGTGGATACTGTCCGAAGGCCTTCACCAGAAAAGACCATCTCGtaaaCCACGTGAGGCAGCACACGGGGGAATCGCCACACAAGTGTTCGTTTTGCACGAAGTCGTTCACTCGCAAGGAGCACCTCACGAATCACGTGCGACAGCATACAGGCGAGTCCCCGCACCGATGTACCTTCTGCTCCAAGTCCTTCACGAGGAAAGAACATCTTACCAACCACGTCAGACAGCACACGGGCGAAACTCCACACAAGTGCACGTACTGCCCGCGCGCGTTCTCCCGCAAGGAGCACCTCAACAACCACATCCGGCAGCACACGGGCGACATGCCGCACTCGTGCACCTACTGCAGCAAGAGCTTCACCAGGAAGGAGCATCTTGTCAACCACATCAGACAACACACAGGCGAAACCCCGTTCAAGTGCACGTACTGCACGAAGTCGTTTTCCCGCAAGGAGCACCTCACGAACCACGTGCATCTCCACACCGGGGAGACGCCGCACAAGTGCCCCTTCTGTACTAAGACCTTCTCCAGGAAGGAACACTTGACCAACCACGTCAGGATCCACACGGGCGAGTCCCCGCACCGCTGCGAGTTCTGCCAGAAGAGGTTTACGCGCAAGGAGCACCTCACGAACCATATGAAACAGCACACCGGAGACACTCCCCACACTTGCAAGATTTGCTCCAAGCCATTCACTAGGAAAGAACATTTGGGAACACATATGAGATCGCACAGTTGCGGTGAACGACCGTATAGTTGCGGCGAGTGCGGCAAATCTTTCCCCCTCAAAGGAAACCTGCTTTTCCACGAGCGCTCCCACAACAAGAATAACGGCGCGAGGCCCTTCCGATGTGACGTCTGCTCTAAGGATTTCCTTTGCAAAGGTCACCTGGTAGCTCACCGACGAACGCACGCAGAGGCGGGCGAATGCGAAGCTCCGGCTGAAGGCGACGACTGCGGCGACCGCACCAAGTGCGAAAAGCAGGAGCCGCCAGAGAGGAAACATGACATCTTagCAACCGTAGAAAATAGGCCAGCAGAAACGACGAATGTCGTACAAAACCCTCAGAGTACTTCAAATGTGATGCAAATTACGACACAGCAGCAAGTGCGCGCGGCCCCGACGAGTGCGCCGGAGCAGTTCGCGCACGCGAGCGGCGCGCACCACAGCGCCGCCCCCGCCGCACTGCACCACCCCGTCACGGTCAACTACTAG
Protein Sequence: MNPEHHNINTGGGQPPGSSESQSQRIQNAQQQQGSNLPATTSATDLRVNSVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGTRIENGKPVQDLGQAHASILNGDPNIILGHHTGQPQVTVSAAQQIPVSQIIAAQSGQTHEALVAHSQQQELAAQQASGGSQVTATHQQVPNSRVEFVQHHNIDMGHHSQQHLMQQQLMAGARQEHANQQIQLTVSEDGIVTVVEPGAGKLVDKEELHEAIKMPTDHQTLTVHQLQQIVGQQVIDSVVRIEQATGEPANILVTHNPDGTTSIEASAADPLIVKDEKNSGKIETAQFAIPADIKDIKGIDLKSVSAMGMEGAVVKISAGASDHDLHAMYKVNVEDLSQLLAYHEVFGKLNTDGQPQTKVISEVEVEAGTSAAMSESESSPGQHSCDICGKSFQFRYQLIVHRRYHGESKPFTCQVCGSAFSNPVELSRHGKCHLAGDPAERNAKRLTQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLMNHMRSHTNDTPFRCELCGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTFCSKSFTRKEHLTNHVRQHTGETPHKCTYCPRAFSRKEHLNNHIRQHTGDMPHSCTYCSKSFTRKEHLVNHIRQHTGETPFKCTYCTKSFSRKEHLTNHVHLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEFCQKRFTRKEHLTNHMKQHTGDTPHTCKICSKPFTRKEHLGTHMRSHSCGERPYSCGECGKSFPLKGNLLFHERSHNKNNGARPFRCDVCSKDFLCKGHLVAHRRTHAEAGECEAPAEGDDCGDRTKCEKQEPPERKHDILATVENRPAETTNVVQNPQSTSNVMQITTQQQVRAAPTSAPEQFAHASGAHHSAAPAALHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01071806;
90% Identity: iTF_00073027;
80% Identity: -