Aeri007828.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Acraspis erinacei
Gene Symbol
-
Assembly
GCA_035041075.1
Location
JAWWLR010000004.1:46145778-46154327[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 24 1.7e-05 0.0069 19.1 2.5 3 23 64 84 64 84 0.99
2 24 0.011 4.5 10.3 0.4 1 23 110 132 110 132 0.97
3 24 0.0001 0.04 16.8 1.4 1 23 138 160 138 160 0.96
4 24 5.1e-06 0.002 20.8 0.8 1 23 167 189 167 189 0.98
5 24 0.0077 3.1 10.8 2.4 1 23 195 217 195 217 0.98
6 24 0.00029 0.12 15.3 0.8 1 23 223 245 223 245 0.98
7 24 7.4e-06 0.0029 20.3 2.9 1 23 251 273 251 273 0.96
8 24 0.0007 0.28 14.1 2.4 1 23 279 301 279 301 0.97
9 24 3e-05 0.012 18.4 1.7 1 23 308 330 308 330 0.97
10 24 2.7e-05 0.011 18.6 1.4 1 23 336 358 336 358 0.98
11 24 5.3e-06 0.0021 20.8 1.8 1 23 364 386 364 386 0.98
12 24 0.00017 0.068 16.0 3.6 1 23 395 417 395 417 0.99
13 24 0.0032 1.3 12.0 8.9 1 23 423 445 423 445 0.99
14 24 0.00083 0.33 13.9 3.7 1 23 638 660 638 660 0.98
15 24 0.0014 0.56 13.2 2.1 2 23 677 698 676 699 0.94
16 24 5.4e-05 0.022 17.6 1.4 1 23 705 727 705 727 0.98
17 24 2.3e-06 0.00093 21.9 1.7 1 23 733 755 733 755 0.98
18 24 2.1e-05 0.0083 18.9 0.8 1 23 761 783 761 783 0.97
19 24 2.6e-05 0.01 18.6 1.2 1 23 789 811 789 811 0.98
20 24 0.00029 0.11 15.3 4.4 1 23 818 840 818 840 0.98
21 24 2.4e-07 9.4e-05 25.0 0.4 1 23 846 868 846 868 0.97
22 24 0.18 72 6.5 0.2 3 23 876 897 874 897 0.95
23 24 5.9e-07 0.00023 23.8 1.5 3 23 905 925 903 925 0.97
24 24 6.5e-06 0.0026 20.5 1.3 2 23 931 952 930 952 0.97

Sequence Information

Coding Sequence
ATGGAAGTAGTTTTGAGAAAGTTTGTTACGCGACACCTTgGTATCATAATTAAATCTGAGCCTCCTGAGTACGCTCCAGTGGATGAAACCAACTTCGAGGAAACCAATAAGCTACAAAGTCTCGCTAGTACAGTGAGCGACGATACATCTATGTTTAAATTGCCTCcaattcctaaaaaaaagaacTGGTGTGATCTAtgtaaaaaagaatacaaaaatcgCGACAGCCTGAAAAGGCATATAAGGAGACACATTGCAAAGCAGAAGTCTGCAAGCGAAAATACTGTAGGAAAAAAAACTGTAGATAACAAACTTGGAGGCAAACTTTTCTGCTGCAACGTTTGCAATAATGGTTTTGAAACAGAAGGCGAGCTTGATATGCATATAAAAGGGCACTCAAGATATACGCCTTTCGAGTGCGATTactgtagaaaaaaattcacaaaccgTCAGAGCATGAAATTGCACATAATTGCTCATATGGCGGGTGGAGGGCCTTACAAGTGCGAAGTTTGTGCAAAAGCTTTCGTTAGGTCCTACAGTTTAAAGATACATCTGCGATTTCACTCAGAAGATAAACCCTATGAATGTAATATTTGCAAGCAGGgctttataagaaaaaatgacCATCATGCACACATGTTAATTCACGAGAACAAAAAACCTTTTGTTTGTGAGATTTGCAACAAAGCTTTTCTGAGGATGTCTTAcctaaataatcataaaaagatacatttagtAGATAAACCCCATGCTTGTAAAGTATGTGGTAAACGATTCATTAGGATACATGATCTCACTATTCATATGCGGTACCATACTGGCGAAAAGCGCTTCGAGTgtgatatttgcaaaaaaaatttcaagaaatatcaaacAATGAAAGTGCACATATACTCTCATATGGGATTCGACCAAAGGCACAAGTGTCCAATTTGTCTAAAAGAGTTTTCAAGGTCCAATTATTTAAAAGAGCATTTACAAGGACACTCGGGAAACAGACCATACGAATGCGAATTTTGCAAGAAGACTTTTGTCAAAAGGTACAGTTTAAATTCACACGTGCTTATCCACCAAAAAACGAAAGATTTTATTTGTGACATTTGTAACAAAGGTTTTACAAAGTCGTATTATCTAAAGTCTCATAAAAGGGTGCATGGGGGACAACAGCTCGAGAAGCCATTCCAGTGTGAACTCTGTAAAAAAGCATTTACTTGTGCAAGCAAGCTTAAGACTCATATCCGTAGTCACACTGGAGAAAAACCCTATGAATGCGCGCTCTGTAAAAAAAGATTCAAGTACTGCCATAGTTTTAAGTCGCACCAAAGGTCACATGAAAATCCTAAAACGTCTCCAAATGTTGAGAGAAATTACGAAGATACAATGTTTCGCACGGTTTATTTGAACAGCCATAAGGGTGGGAAGAACGGTCATTCGAGTGTGGTTGAAATTGTACCAATCACTGTCCGGAATATCGATCTTAGGAATGCAGTACAAATAAAAGAGGACAGTACTATGCAGGTTCAAGAGGAGACGAGTCTTGCAAAAGCGACTGACTCTggaaaaaatcttaagaataaaGTGCGAAAAAAAGAGCAGGTTCAAGAAAAGAAGAGTCTTGAAAAAGCGACTGATTCTGAAAACTCTAGACTAATTTCTGTGAAAACCGAACCTAGTGATAGACAAGAGCCAACTTTCGAAATAGAAGTTGAAGATttttcaCCAAACCATAAGGATGACATCTACACCGAAGTCATAATAAAATCTGAGCCTCCAGAACAAGAATCAGTCgacataaaagaaaatttgttaggAGATCTTAGAAAGCTCTCAAATGATAATCACAAAAATGGCTCTCCGAAGAATGACGTACATAGTTCAGAAGCTCCTgatataaaacttgaaaaattacacCGGTGTGAAAAATGTCGACAAGAATTCAAAAACGCTCAAAGCCTGAGCAACCATAAGCGCATCCACACTAAAAAGAAACGCAAAATATCCCGTAAAAAAGATCCCGCTCCTGACAAGTGCTCAGTTTGTGCCAAAGAATTCACGAATCCCAACAgtttaaaagtgcatttttttcgaCACCACTCAGAAGGAAAAGCCTTTGAATGTGAAGTCTGCAAAAAGTGCTTTCCACTGAAGTATGATCTAGACGCCCACATGTACATGCACACTACAAAAAAAGCTTTTGTTTGTGATGTTTGTTCCAAAGCCTTTCGGAGGTTGTCGTATCTCAATAATCATAAAAAGACACACCTGGAGAAAAGACCCTATGCGTGTAAAATCTGTAATAAACGGTTTATGAAGCCATATCTTCTGAATATCCACGTACGCTATCACACTGGAGAAACGCCTTTTGAGTgcgacatttgtaaaaaaaaatttacgaaccGCAATACTGTGAGAATGCATATAGCAACTCATATTGAAGGTGGTGGACCGCATAAGTGTTCAGTTTGTGAAAAAGGCTTTGTGAGAAAGTGTCGTTTAAAAATCCACATGCAAATCCACTCAGGTGTTAAGCCCTACGTATGTAAAGTTTGCCAGAAAGCATTTACAAGAAAGGATTATTTAACGGCACATATGGTTGTGCACGAAAGCGTAGAATCCTTTGGTTGTGAGATTTGCTTCAAAGAATATCCTAAAATGGCAGCTCTCAAGTTGCATAAGAGTATGATGCATTCGGATAATAAGCCGATCGATTGTGAAAATTGTGGGAAAAGCTTTAGCAACAGAAGAAAGCTTACACGGCATATGAGTTCTCACAATGGAGAGACTACCGAGTGCgatatttgtaaaaagaatttcaaaaatccgCGTAGTTTAAAAGTCCATAAAAGAATACATAAAGCGAAGAAAGATCTTCTGCAAGATGGTTTTGAAACGGTTTATTTAGAAAGCGGACATAATGAAGACAATGAGTCTAATCATATTTCCTTGAATGAGATAGATGTAGTTAGTTCTGTAAAGACAGAAATGACGAGTGAAATAGAAGGCAAAAGAGATAGTATTTTATCACctgggaaaaataaatttgatgttaCTTCAGATTTAGCTTTCGAAATAGATATTGAAGATGTTAAGATAGAAGTTCACGAggtgtaa
Protein Sequence
MEVVLRKFVTRHLGIIIKSEPPEYAPVDETNFEETNKLQSLASTVSDDTSMFKLPPIPKKKNWCDLCKKEYKNRDSLKRHIRRHIAKQKSASENTVGKKTVDNKLGGKLFCCNVCNNGFETEGELDMHIKGHSRYTPFECDYCRKKFTNRQSMKLHIIAHMAGGGPYKCEVCAKAFVRSYSLKIHLRFHSEDKPYECNICKQGFIRKNDHHAHMLIHENKKPFVCEICNKAFLRMSYLNNHKKIHLVDKPHACKVCGKRFIRIHDLTIHMRYHTGEKRFECDICKKNFKKYQTMKVHIYSHMGFDQRHKCPICLKEFSRSNYLKEHLQGHSGNRPYECEFCKKTFVKRYSLNSHVLIHQKTKDFICDICNKGFTKSYYLKSHKRVHGGQQLEKPFQCELCKKAFTCASKLKTHIRSHTGEKPYECALCKKRFKYCHSFKSHQRSHENPKTSPNVERNYEDTMFRTVYLNSHKGGKNGHSSVVEIVPITVRNIDLRNAVQIKEDSTMQVQEETSLAKATDSGKNLKNKVRKKEQVQEKKSLEKATDSENSRLISVKTEPSDRQEPTFEIEVEDFSPNHKDDIYTEVIIKSEPPEQESVDIKENLLGDLRKLSNDNHKNGSPKNDVHSSEAPDIKLEKLHRCEKCRQEFKNAQSLSNHKRIHTKKKRKISRKKDPAPDKCSVCAKEFTNPNSLKVHFFRHHSEGKAFECEVCKKCFPLKYDLDAHMYMHTTKKAFVCDVCSKAFRRLSYLNNHKKTHLEKRPYACKICNKRFMKPYLLNIHVRYHTGETPFECDICKKKFTNRNTVRMHIATHIEGGGPHKCSVCEKGFVRKCRLKIHMQIHSGVKPYVCKVCQKAFTRKDYLTAHMVVHESVESFGCEICFKEYPKMAALKLHKSMMHSDNKPIDCENCGKSFSNRRKLTRHMSSHNGETTECDICKKNFKNPRSLKVHKRIHKAKKDLLQDGFETVYLESGHNEDNESNHISLNEIDVVSSVKTEMTSEIEGKRDSILSPGKNKFDVTSDLAFEIDIEDVKIEVHEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00089800; iTF_00064655;
90% Identity
-
80% Identity
-