Aque004236.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Amphibolips quercusostensackenii
Gene Symbol
-
Assembly
GCA_032357855.1
Location
JAUELO010000032.1:859537-875599[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 27 2.7e-05 0.013 18.2 0.1 1 23 15 37 15 37 0.99
2 27 8.7e-05 0.043 16.6 4.5 2 23 48 69 47 69 0.98
3 27 0.00077 0.38 13.6 0.5 1 23 74 96 74 96 0.98
4 27 3.7e-06 0.0018 20.9 1.7 3 23 178 198 178 198 0.99
5 27 0.0097 4.8 10.2 0.4 1 23 234 256 234 256 0.97
6 27 8.7e-05 0.043 16.6 1.4 1 23 262 284 262 284 0.96
7 27 6.2e-06 0.0031 20.2 0.8 1 23 291 313 291 313 0.98
8 27 0.0067 3.3 10.7 2.4 1 23 319 341 319 341 0.98
9 27 0.00026 0.13 15.1 0.8 1 23 347 369 347 369 0.98
10 27 6.4e-06 0.0032 20.2 2.9 1 23 375 397 375 397 0.96
11 27 0.0006 0.3 14.0 2.4 1 23 403 425 403 425 0.97
12 27 1.7e-06 0.00083 22.0 1.2 1 23 432 454 432 454 0.97
13 27 2.3e-05 0.011 18.4 1.4 1 23 460 482 460 482 0.98
14 27 8.2e-06 0.004 19.8 1.7 1 23 488 510 488 510 0.98
15 27 0.00015 0.074 15.9 3.6 1 23 519 541 519 541 0.99
16 27 0.0028 1.4 11.9 8.9 1 23 547 569 547 569 0.99
17 27 0.0005 0.25 14.2 3.2 1 23 747 769 747 769 0.98
18 27 0.00032 0.16 14.8 1.1 2 23 786 807 785 808 0.94
19 27 0.00011 0.053 16.3 2.3 1 23 814 836 814 836 0.98
20 27 2e-06 0.001 21.7 1.7 1 23 842 864 842 864 0.98
21 27 8.8e-06 0.0044 19.7 0.4 1 23 870 892 870 892 0.97
22 27 1.5e-05 0.0074 19.0 1.1 1 23 898 920 898 920 0.98
23 27 0.00034 0.17 14.7 5.3 1 23 927 949 927 949 0.98
24 27 3.2e-07 0.00016 24.3 0.9 1 23 955 977 955 977 0.98
25 27 0.0049 2.4 11.1 1.0 3 23 985 1006 983 1006 0.95
26 27 0.00013 0.064 16.1 3.3 3 23 1014 1034 1012 1034 0.96
27 27 4e-05 0.02 17.7 2.2 2 23 1040 1061 1039 1061 0.96

Sequence Information

Coding Sequence
ATGAAAGTTCACGTACTTGCTCACATGGAAGATGACGAGCCGTACAAGTGTGGAGTTTGTGCAGAAGGTTTTGTAACTTCGGACACTTTAGAGCTCCACATGCAGACCCATCGAGGACGCGAATCCTTTGAATTGCCCAACAAGTGTGAAACTTGTGAAAAAAGATTTAGAACGACAAATCAACTTCATATTCACATGCGTAGTCACATTAGAGGGGATTTCGAGTGCGATATTTgtaagaagaatttgaaatatgcaGAATCTTTGGAAATGCATAAAATGTCGCACATGAAATCTAATAAACGTCCAAATAGCAAAATAACTCACCAGCAAATAGATTTTGAAACGTTTGAATCAAATGACCTAGACTACGCATTTGAAGGTATCGTAATCAAAGCTGAGCCTCTTGACTATGCTGTTGATGAAGCTAAGTTCGAAGAAGACAATAAGCTAGAAAATCTCTCTGATAAAGTGAACGATAATGCATCTACTTTAAAATTGCCTctagaacaacaacaaaaaaataactggTGTGATATATGtcaaaaagaatacaaaaatcgCGACAGTCTCAAAAGGCACATCAGGAGACACAATGCAAAGAAAAAGGTGACAGCCGAAAATACCGTAGGCAAAAATACTGTagtcaaaaaaattgtaggtaaaaATACTGTAGATAACAAAATTGGAGGCAAACTTTTCTGCTGCAACGTGTGCAATAATGGTTTTGAAACAGAAGGCGAGCTTGATATGCATATAAAAGGGCACTCAAGATACACGCCTTTCGAGTGCGATTACtgcagaaaaaaattcacaaaccgTCAGAGTATGAAATTGCACATAATTGCTCATATGGCAGGTGGTGGACCTTTTAAGTGCGAAGTTTGTGCAAAAGCTTTTGTCAGATCCTACAGTTTGAAGATACATCTACGATTTCACTCAGAAGATAAACCCTATGAATGTAATATTTGCAAGCAGGgctttattagaaaaaatgaccATCATGCACACATGTTAATTCACGAGAATAAAAAACCTTTTGTTTGTGATATTTGCAACAAAGCATTTCTGAGGATGTCTTACCTAAATAAtcacaaaaagatacatttaataGACAAACCCCATGCTTGTAAAGTATGTGGTAAACGATTCATTAGGATACATGATCTTACAATTCATATGCGCTACCACACTGGCGAAAAGCGCTTCGAGTGCGacatttgtaagaaaaatttcaagaaataccaAACAATGAAAGTGCACATATACTCTCATATGGGATTTGACCAAAGGCACAAATGTCCAATCTGTCCCAAAGAGTTTTCAAGGTCCAACTATTTAAAAGAGCATTTACAAGGACACTCGGGAAACAGACCATACGAATGCGAATTTTGCAAAAAGACTTTCGTTAAAAGGTATAGTTTGAATTCACACGTGCTTATCCATCAAAAGACAAAAGATTTCATTTGTGACGTTTGCAACAAAGGTTTTACAAAGTCGTATTATCTAAAGTCTCATAAGAGGGTACATGGGGGGCAACCAATCGAGAAGCCTTTCCAGTGTGAACTCTGTAAAAAAGCATTTACTTGTGCAAGCAAACTTAAGACTCACATCCGTAGTCACACTGGAGAAAAGCCATACGAATGCGCGCTTTGTAAAAAAAGATTCAAGTACTGTCATAGTTTTAAATCGCACCAAAGGTCACATGAAAATCCTAAAACGTCTCCAAATGCCGAGGGAAGTTACGAAGATAGAATGTTTCGCACGGTTTATTTGAACAGCCATAAGAGTGGGAAGAACGGCGATCCGAGTGTGGTTGAAATTGTACCAATCACTGTCCGGAACATCGATCTTAGGAATGCAGTGCAAAAAAAAGAGGACAGCAATATGCAGGTTCAAGAAAAGAAGGGTCTTGAAAAAGCTACTGATTCTGGAAACTCTAGTCTAATTTCTGTGAAAACCGAACCTCGTGATAGAATAGATCCAACTTTCGAAATAGAAGTTGAAGATGTGAAAGTAGAAGTTGATGAAATGGAGAATGAATTTAAGGGAAACCGCGAGGATGACATCTGCACCGAAGTCACAATTAAAGCTGAGCCTCCAGAACTAGAATCAGTTGACGTAAAAGAGAGTTTGACAGGAGATCTTAGCAAGCTACCAAATGACAATCACAAAAATAACCCTCCAAAGAATGACGAAAATAGTTCAGAAAGTCCtacaataaaacttgaaaaactaCACCGGTGTGATCAATGTCGACAAGAATTCAAAAACCCTCAAAGCCTGAGCAACCACAAGCGTATCCACACtaaaaagaaatgcaaaatatCCGGTAAAAAAAATCCTGTTCCTGACAAGTGCCTAGTTTGTGCCAAAGAATTTACGAATCCTAACAGTTTAAAAGTGCACATTTTTCGACACCACTCAGAAGGAAAAGCCTTTGAATGTGAAGTATGCAAAAAGTGCTTTCCACTGAAGTATGATCTAGACACCCACATGTACATGCACACTACAAAAAAAGCTTTTGTTTGTGATGTTTGCTCCAAAGCCTTTCGGAGGTTATCGTATCTCAATAATCATAAAAAGACACACTTGGAGAAAAGACCGTACGCATGTCAAATCTGTGGAAAACGGTTTATGAAGCCATATCTTCTTAATATTCACGTACGTTATCACTCTGGAGAAACGCCTTTCGAGTgcgatatttgtaaaaaaaaatttacgaaccGCAATTCTGTGAGAATGCATATAGCAACTCATATCGAAGGTGGTGGACCGCATAAGTGTTCAGTTTGTGAAAAAGGCTTTGTGAGAAAATGTCGTTTAAAAACCCACATGCAAATCCATTCAGGAGTTAAGGCCTATGTATGTAAAGTTTGCAAGAAAGCATTTACAAGACATGATTCTTTAACGGCACATATGGCTGTCCACGAAAGCATAGAATCCTTTGGTTGTGAGATTTGCTTCAAAGAGTTTCGTAAAATGTCAGCTCTCAAAATGCATAAGAGTATGCAGCACCCGGAAGATAAGCCGATCGATTGTGAAAATTGTGGGAAAAGCTTTAGAAATAGAAGTAAACTTACGTGTCATATGAGTTCTCACAATGGAGAGATTTCCGAGTgcgatatttgtaaaaaaatatttaaaaatcagcgTAGTttgaaaagtcataaaaagttaCATAAAGCTAAGGAAGATCTTCTGCAAGCAGATTTTGAAACTGTTTATTTAGAAAGCGGGCATAATGAAGACAATAAGTCTGATCACATTTCTTTGAATGAGAAAGATGTAGTCAGTTCTGTGAAGACGGAAATTATGAGTGCAATAGAAGATAAAAGAGATGGTATTTTATTAcctgggaaaaaaaaatttgatgttatttCAGATATAGGTTTCGAAATAGATGTTGAAGATGTTAAGATAGAAGTTCATGAGGTGTAA
Protein Sequence
MKVHVLAHMEDDEPYKCGVCAEGFVTSDTLELHMQTHRGRESFELPNKCETCEKRFRTTNQLHIHMRSHIRGDFECDICKKNLKYAESLEMHKMSHMKSNKRPNSKITHQQIDFETFESNDLDYAFEGIVIKAEPLDYAVDEAKFEEDNKLENLSDKVNDNASTLKLPLEQQQKNNWCDICQKEYKNRDSLKRHIRRHNAKKKVTAENTVGKNTVVKKIVGKNTVDNKIGGKLFCCNVCNNGFETEGELDMHIKGHSRYTPFECDYCRKKFTNRQSMKLHIIAHMAGGGPFKCEVCAKAFVRSYSLKIHLRFHSEDKPYECNICKQGFIRKNDHHAHMLIHENKKPFVCDICNKAFLRMSYLNNHKKIHLIDKPHACKVCGKRFIRIHDLTIHMRYHTGEKRFECDICKKNFKKYQTMKVHIYSHMGFDQRHKCPICPKEFSRSNYLKEHLQGHSGNRPYECEFCKKTFVKRYSLNSHVLIHQKTKDFICDVCNKGFTKSYYLKSHKRVHGGQPIEKPFQCELCKKAFTCASKLKTHIRSHTGEKPYECALCKKRFKYCHSFKSHQRSHENPKTSPNAEGSYEDRMFRTVYLNSHKSGKNGDPSVVEIVPITVRNIDLRNAVQKKEDSNMQVQEKKGLEKATDSGNSSLISVKTEPRDRIDPTFEIEVEDVKVEVDEMENEFKGNREDDICTEVTIKAEPPELESVDVKESLTGDLSKLPNDNHKNNPPKNDENSSESPTIKLEKLHRCDQCRQEFKNPQSLSNHKRIHTKKKCKISGKKNPVPDKCLVCAKEFTNPNSLKVHIFRHHSEGKAFECEVCKKCFPLKYDLDTHMYMHTTKKAFVCDVCSKAFRRLSYLNNHKKTHLEKRPYACQICGKRFMKPYLLNIHVRYHSGETPFECDICKKKFTNRNSVRMHIATHIEGGGPHKCSVCEKGFVRKCRLKTHMQIHSGVKAYVCKVCKKAFTRHDSLTAHMAVHESIESFGCEICFKEFRKMSALKMHKSMQHPEDKPIDCENCGKSFRNRSKLTCHMSSHNGEISECDICKKIFKNQRSLKSHKKLHKAKEDLLQADFETVYLESGHNEDNKSDHISLNEKDVVSSVKTEIMSAIEDKRDGILLPGKKKFDVISDIGFEIDVEDVKIEVHEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00011363;
90% Identity
-
80% Identity
-