Basic Information

Insect: Acleris laterana
Gene Symbol: -
Assembly: GCA_963966035.1
Location: OZ014464.1:7014776-7027399[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.043 4.3 9.1 0.9 1 23 241 263 241 263 0.96

2 15 0.029 2.9 9.6 0.0 2 23 292 314 291 314 0.93

3 15 0.71 71 5.3 0.6 2 23 335 357 334 357 0.92

4 15 0.00069 0.069 14.7 2.1 2 23 363 385 362 385 0.95

5 15 0.0018 0.18 13.4 1.3 1 23 390 413 390 413 0.96

6 15 0.2 20 7.0 0.1 2 23 416 438 415 438 0.95

7 15 0.075 7.6 8.3 1.4 2 22 445 465 444 465 0.93

8 15 0.0032 0.32 12.7 0.3 1 23 525 548 525 548 0.95

9 15 0.039 3.9 9.2 0.6 3 23 622 644 620 644 0.95

10 15 0.00063 0.063 14.9 0.6 3 20 651 668 649 672 0.90

11 15 0.01 1 11.1 0.4 1 23 677 700 677 700 0.97

12 15 0.00041 0.041 15.5 0.7 2 23 706 728 706 728 0.94

13 15 4.4e-05 0.0044 18.5 4.9 1 23 732 755 732 755 0.97

14 15 0.0002 0.02 16.4 0.6 2 23 762 783 761 783 0.96

15 15 0.0044 0.44 12.2 3.2 1 23 789 811 789 811 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.043	4.3	9.1	0.9	1	23	241	263	241	263	0.96
2	15	0.029	2.9	9.6	0.0	2	23	292	314	291	314	0.93
3	15	0.71	71	5.3	0.6	2	23	335	357	334	357	0.92
4	15	0.00069	0.069	14.7	2.1	2	23	363	385	362	385	0.95
5	15	0.0018	0.18	13.4	1.3	1	23	390	413	390	413	0.96
6	15	0.2	20	7.0	0.1	2	23	416	438	415	438	0.95
7	15	0.075	7.6	8.3	1.4	2	22	445	465	444	465	0.93
8	15	0.0032	0.32	12.7	0.3	1	23	525	548	525	548	0.95
9	15	0.039	3.9	9.2	0.6	3	23	622	644	620	644	0.95
10	15	0.00063	0.063	14.9	0.6	3	20	651	668	649	672	0.90
11	15	0.01	1	11.1	0.4	1	23	677	700	677	700	0.97
12	15	0.00041	0.041	15.5	0.7	2	23	706	728	706	728	0.94
13	15	4.4e-05	0.0044	18.5	4.9	1	23	732	755	732	755	0.97
14	15	0.0002	0.02	16.4	0.6	2	23	762	783	761	783	0.96
15	15	0.0044	0.44	12.2	3.2	1	23	789	811	789	811	0.97

Sequence Information

Coding Sequence: ATGATGGATTTTGACGAGATTGTTGTTAAAGAGAGCCCCGGCTTATGCCGGTGTTGTCTTTCCGAGGGGTGTTACAAGGACTTGGGCTCGGAATATAGTTGGATGAGCGAGACTGAAATTTACGCCGATATGCTGCTCGAATGCTTCGATATTAGTATATCGCAGCACCCCACGGGTCCGAATGGTTCCAACCGTCTCATCTGCGAGGTGTGCATCACGCGGCTGCGCGACGCCTGCAACTTCAAGAAGCAGGTGCTGGAGTCGGAGAAGAAGTTCGTGGACATGGTCGGACGCGGGGAGTTTCGACCTAAAGTGCTGCTGTACCAGACCCAGATGAAGACCGAGCTGACCATGGAGCTGGAGGAGGAAGTCGCTGATGATGCGGAGGTGGAGTACCTCGAGGATGACGGGGACTTCGTTGATGATGACCTCAAACACGAAGACTACGCCGAAGCGTCCGTCTCCGAGGACATAACTGTCTCGGCGTTGGCTGTCAAAGGCAAGCGCGGCCGCCCCAAGAAGAGCTCCACAGCCACTAAACCGGAGAAGAAAGCCAAGGTGCCCAAGCTCGAGGACAAACCTACCAAGTCGAAGGCGGTTGCGAAAGATGTAAAACCGCGGAAATACAAAGGCTGCGAATCGTCCTCGATGCGCAGACGGAAAAATCTACAAATATTGTTCAACAGCACCTCCATTATTCCGTTCAAATGGCGCGGCAAATACCTCTGCTTCTATTGCAGCAAAGACATAGCCGAGTACTCCGCGCTTCGCAAACACACCAAATCTCATGGCGACTGTTCGACCAGAGATCATTCTTTAAAAGTACTCAAGGGCGGCACTAACATGGAAATCAAAATTGACGTATCCGATATAACTTGCGAAATATGTAACGAACCATTCCCCTcttttgatgatattataactcatttatttataaaacataagTTGGAATACGACCGCGGCGTAGAAATGGCAATAGAAGAGTACAGGCTAGTCGATCTCAGTTGCTTAGCGTGTCACGAAAAATTCGCATATTTCGGGTACCTAGTATCCCACGTTAACAATAACCATCCGAAAAACTGTCTTATTTGTGATAAATGTGAgcaaaagtttaataaaaaacgtGACCTGTTCTCCCACATGAAGAACTATCACAGGGAAGGAGGCTATAAGTGCGAGCTTTGTCCGCAGAGCTTTAGTTCATTGAATATACTTCGTAAACACAGGAACAATCGCCACTTGACTAGGTGTAGCATTTGTCAATTGAAACTACCCTCGGCTGcgttaaaacaaaaacacatggAAGTCGAACATCCTGACGATGGATCTCTGCAGTGTGACAGCTGCTTCAAAGAATTCCACACCAAGCAGGGGCTTCGGATGCACGCAAGAAAGTGCAAGGGCGAAGATGAACTTTACGAAAtggaaattagaaaaaaagatTACGACATGGATTTGGACGAGAATTACGCGGATCCCGTGAAGAGACCCAGCGTTAAACAGATTAGGGAGAACATTGTGATAGTTATTAATATGTCGACTGCTATACCTTTCAATTTCTATAAGAATAAATTTAACTGCTTCTATTGTTCCAAAGATTTTCCTGATTCAGATTTAATGCGGGAGCACACTATAATAGAACATCCAATATGCGACGTCAAGCAGAAATGCATTAAGAAATGTAGGGAATCTGTAGCGTGCGTAAAAATCGACATTTCGTCTCTAGCGTGTAAACTCTGTTTTGAATCTGTTATGGACTTTGACACTATGTTAGATCATTTAATAATCACCCACGGAGCGAACTACGATAAGTCGATCACTACGTGCTTGCAACCCTATAGGCTTATTAAAGACCACATGGCATGCCCTCACTGTCCTGGGGAAGTTTTTAGATTCTTCGGAACGTTGTTAAAACATATGAATAATAAACAtactaataataacataatttgCGTTTATTGCGGGCAAACTTTTAGAAGGGATCAAAATCTCCGCGTTCATATTTGGAGGCATCATAGGGATGGTAGGTTCAAATGTAATATATGTGGCGCAGAGTGTAATATACCTTCTAGGCTGTACATGCACATGGCTAAAGCTCACGGTGTCAAAGCAGCCAAATGCCCTAAATGTTCTGAGAGTTTTTCAACGCAATATTTGAGACAGAAGCACTTGATAGAGGCGCACAATTCGGGGCACAAATGCACGTATTGCGGGAAACTGTTCACCAGGAATTCTTTCATGAGGGATCATATTCGGAGGACGCATCTCAAGGAGAAAAACGTTGAATGTTCCATATGTAATATGAAGTTTTTCAATAATATATTACTTAGGCGACACATGGTCAAGCACAGCGGAGAAAAGAATTTCCACTGCGATATTTGCGGTGAAAGATTCTTCTGGAGAAAAAGTCTTCGGACGCACATGTCTAGGCATAATAAACACATGAATCCTATACAAATTTAG
Protein Sequence: MMDFDEIVVKESPGLCRCCLSEGCYKDLGSEYSWMSETEIYADMLLECFDISISQHPTGPNGSNRLICEVCITRLRDACNFKKQVLESEKKFVDMVGRGEFRPKVLLYQTQMKTELTMELEEEVADDAEVEYLEDDGDFVDDDLKHEDYAEASVSEDITVSALAVKGKRGRPKKSSTATKPEKKAKVPKLEDKPTKSKAVAKDVKPRKYKGCESSSMRRRKNLQILFNSTSIIPFKWRGKYLCFYCSKDIAEYSALRKHTKSHGDCSTRDHSLKVLKGGTNMEIKIDVSDITCEICNEPFPSFDDIITHLFIKHKLEYDRGVEMAIEEYRLVDLSCLACHEKFAYFGYLVSHVNNNHPKNCLICDKCEQKFNKKRDLFSHMKNYHREGGYKCELCPQSFSSLNILRKHRNNRHLTRCSICQLKLPSAALKQKHMEVEHPDDGSLQCDSCFKEFHTKQGLRMHARKCKGEDELYEMEIRKKDYDMDLDENYADPVKRPSVKQIRENIVIVINMSTAIPFNFYKNKFNCFYCSKDFPDSDLMREHTIIEHPICDVKQKCIKKCRESVACVKIDISSLACKLCFESVMDFDTMLDHLIITHGANYDKSITTCLQPYRLIKDHMACPHCPGEVFRFFGTLLKHMNNKHTNNNIICVYCGQTFRRDQNLRVHIWRHHRDGRFKCNICGAECNIPSRLYMHMAKAHGVKAAKCPKCSESFSTQYLRQKHLIEAHNSGHKCTYCGKLFTRNSFMRDHIRRTHLKEKNVECSICNMKFFNNILLRRHMVKHSGEKNFHCDICGERFFWRKSLRTHMSRHNKHMNPIQI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00013343;
90% Identity: iTF_00325705; iTF_01072869; iTF_00773130; iTF_00462668; iTF_00410599; iTF_00409551; iTF_00871613; iTF_01464400; iTF_00658738; iTF_00660579;
80% Identity: -