Alat026807.1
Basic Information
- Insect
- Acleris laterana
- Gene Symbol
- -
- Assembly
- GCA_963966035.1
- Location
- OZ014455.1:11461636-11463999[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-10 7.9e-08 33.0 0.0 2 38 11 48 10 54 0.87 2 2 5.2 2.7e+03 -0.7 0.0 21 29 351 359 350 360 0.89
Sequence Information
- Coding Sequence
- ATGGCGCCTACAAAAAGGCAAAAATGGGATAAAGATTCCATGGCTATGGCTATATTGGCTATACGAGAAAAGAAAATGGGATTTTTAAAAGCATCAAAAACTTTTGGCGTACCAAAAACGACTCTTTTacgattatgtaaaaaaaatgaagttatGGGAATGGAAGATGTGACAAACATAAAATTGGGGAGAAAGGCAACATTTCCAGTCAATTTGGAGGCCGATTTGGCTGCATATGTACTTGAACTGGAGGCATTAGGTTTTGGTTTAACTCGGAGAGACATCAAGTCTTTAGCCTTTCAACTagctgaaaaaaataacataagccATCCCTTCTCCAAAGAAAAACAGACTGCTGGCAGAACGTGGCTGCGCTTATTTTTGAGACGCCACCCAGAACTTTCTTTTCGGCAGCCCACTGGAACATCTATTGCCAGATTAAAAGGCTTTAATAAAGAAAGTGTTCGTGAATTTTATAGcttattagaaaacgcaatgGACAAACACAAGTACACTCCCAACAATATCTACAACGTCGATGAGACGGGAATATCAGTTGTGCCTAATAAAATGCCTGAAGTGTTGGCGCAGAAAGGAAAAAAATCGGTCGTTGCCACCACATCTGCTGAGCGAGGTGCTACCATTACATGCGTTATGTGTATGAGTGCTAGCGGGTCATTCATTCCACCGATGATGATTTTCCCCCGCAAACGAGATCATCCTCTATTGATGAAAGGAGCCCCGCCTAGTGCAATACATGCATGTCATCCATCCGGCTGGATCCAAACAGACCTTTTTACGAAATGGTTTAAGCACTTTTTACAGCATGCGAAGCCATCCGGGGCTTCACCTGTACTCTTGATTTTAGATGGTCATGCTAGTCATACCCGTAACATCGAACTGATTGATTTAGCACGTGAAAACCATGTACAACTGCTGTCTTTACCGCCACACTCAAGCCATAAAATGCAGCCTCTTGACCGCACTTACATGGGTCCACTAAAAAAATACCTGGCAGAGGAAATTCGACAGTGGATGCGAAATAAAACTCAAGCAGCTACACAGTACGACATTGCAGAACTGTTTGGGCGTGCCTACATAAGAGCACAGCGAGCTGAACTTGCTATCAATGGTTTTCGTGTAACTGGAATATGCCCATTAAACAGAAACGTTTTTCAAGATCACGATTTTATTGATGATGCAGAGACAGATGAGATTATTCTCTCAAGTTCCCATTTTCAGCAAGCTAATTTAATCAACACGAGTCAAGAGCAAACAATAATTAGCGAACCTCAAGTTGTGAATAATACTAGTCATCCCCAAATTGATCCATTACAATCAGTCAATATGTCCCTACCAATTACTTTAAGCCGAGATCAACAATCTGACCATAATCTAATTACGGCCCAAATTAATGAACCCGATGTTCTTAATAAAAAACAGGATCAAAGTGAGCCATGTACGTCAGTTAATGAATCCCAACTGACTGTTGTAAATCAAGACCAACAACCTGAGGATGATTTAATATTGGCAGATGACATTCTTCCTACAATTTCTCACATTGAGCAAGCAAATCCGATCCAATTTCAAACAATTACCAAAGAACCTGAAAATGAAACTCTGAGTACGGCAGCGGGAACCAAGGCTATAAATGAAGTCCAGACATTGGCTCAGTTGGCATTAGCTGTAATTTTGCTTGGAGAGAAGTCATACGTCGCTGcaaaagttatttataatgaAAGTCCATCTACTTCTACTTACTTTTCTCCAAAGCAGCTATTTGATGTACCACGACTAACTAAAAAATCTAGTAACAGAGGAAGAAAGAGCAGTAAATCTACATTTTTGACATCGTCACCGTACAAACTAAATTTAGAAACATCaattaaaaagaaagaagaCGCAGAGTTATTGAAAAAAACACGAAATATAGCAAAAGAATTAAAAGAATCCAACAAAAAAGAACTAAAGAAAAAAGCTGAAACTAAGAAAGGAATGAAGAAAAGAGATGAAGAACCTAAAACGACAAATGCGTCGAAGAAACAGGAAAAAACGAAAAACAAGGCTGCAactaaaagaaaactaaaagagAAGCAAAAAGGAACTAAAAAGACAGTTCAAAAGAAAAGGAAGACTACAAGAAAGGGCCAGCCCTCTAGTTCCGAAGACGATAATTTTTCAGTAAATGATGACACCGATGAAAGTGATAATGACAATGCTAAATGTCTATACTGTTACAGTCTCTTTTCAGATGACACTCGTGGAGAACAATGGATACAGTGTCCTTCTTGTGAGCGATGGGCACATGAAGAATGTGCTGGTGTCGATGGCATTTCATTTTTATGTGAACATTGCTCTAATTAG
- Protein Sequence
- MAPTKRQKWDKDSMAMAILAIREKKMGFLKASKTFGVPKTTLLRLCKKNEVMGMEDVTNIKLGRKATFPVNLEADLAAYVLELEALGFGLTRRDIKSLAFQLAEKNNISHPFSKEKQTAGRTWLRLFLRRHPELSFRQPTGTSIARLKGFNKESVREFYSLLENAMDKHKYTPNNIYNVDETGISVVPNKMPEVLAQKGKKSVVATTSAERGATITCVMCMSASGSFIPPMMIFPRKRDHPLLMKGAPPSAIHACHPSGWIQTDLFTKWFKHFLQHAKPSGASPVLLILDGHASHTRNIELIDLARENHVQLLSLPPHSSHKMQPLDRTYMGPLKKYLAEEIRQWMRNKTQAATQYDIAELFGRAYIRAQRAELAINGFRVTGICPLNRNVFQDHDFIDDAETDEIILSSSHFQQANLINTSQEQTIISEPQVVNNTSHPQIDPLQSVNMSLPITLSRDQQSDHNLITAQINEPDVLNKKQDQSEPCTSVNESQLTVVNQDQQPEDDLILADDILPTISHIEQANPIQFQTITKEPENETLSTAAGTKAINEVQTLAQLALAVILLGEKSYVAAKVIYNESPSTSTYFSPKQLFDVPRLTKKSSNRGRKSSKSTFLTSSPYKLNLETSIKKKEDAELLKKTRNIAKELKESNKKELKKKAETKKGMKKRDEEPKTTNASKKQEKTKNKAATKRKLKEKQKGTKKTVQKKRKTTRKGQPSSSEDDNFSVNDDTDESDNDNAKCLYCYSLFSDDTRGEQWIQCPSCERWAHEECAGVDGISFLCEHCSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00009935; iTF_00009937; iTF_01072403; iTF_00008855; iTF_00008854;
- 90% Identity
- -
- 80% Identity
- -