Ahol039190.1
Basic Information
- Insect
- Acleris holmiana
- Gene Symbol
- -
- Assembly
- GCA_949316455.1
- Location
- OX438790.1:649457-651004[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.11 91 4.5 0.4 16 44 78 103 73 103 0.84 2 11 0.39 3.2e+02 2.7 4.8 6 43 100 132 93 133 0.79 3 11 0.0026 2.1 9.7 5.3 6 44 127 162 126 162 0.86 4 11 9.7e-05 0.08 14.2 0.6 7 44 158 192 156 192 0.93 5 11 0.01 8.6 7.7 0.6 11 42 192 220 191 222 0.74 6 11 0.017 14 7.0 1.3 13 44 224 252 218 252 0.83 7 11 0.2 1.7e+02 3.6 4.5 4 38 244 274 243 279 0.84 8 11 4.2e-05 0.034 15.4 2.2 3 44 310 348 308 348 0.89 9 11 0.0041 3.4 9.0 1.7 16 43 351 375 349 376 0.90 10 11 0.88 7.2e+02 1.6 2.7 18 43 383 405 377 406 0.74 11 11 0.033 27 6.2 2.3 8 29 402 423 396 433 0.80
Sequence Information
- Coding Sequence
- ATGGAGCATGAAATCGAGCACATCGACATAAAGCCAGATATAGGCCACTTGAAAGTTGAAATCAATTATCAACCGGACCCATACCAAACCCCTGAAACGGTATTTGGGCTACAACCAGAGCAAAATGATAGAGAAATCACAACGAATCATAATAATGGAAGTAATCGCAACGTGAAAACTAATAGTGCCATTGAAATAGTTGGAAAAGTATATGAAAATGGTAAAGTGAATCGGCTACAGTGTCCCCAATGTGATAATTCGTTTAAGAACAGAGCAAATTTAAAGCAGCATTTAAAATTTGTTCACTCCTCTGAAGATGATATAGTGGAATGTGATAAATGCTACAGGACCTTCAAGTCCGTTGGACATTTAAGGTCTCATATTCATTCTGTACATGCAGAAGAGAAAGAAGTGAAGTGTGAACACTGCGGTAAAGTTTTTCTGAACAAGAAACGTTTGAacaatcatattttttatgccCATCCGGAGCCTGAGGAAAGTGTCAATTGTGAGGTGTGTTCAAAGGTTTTTAAACGAAGATATAATCTTAAAATTCATATGAGGTTAGTTCATCCATCTGATGAACGGTCTGTTCAGTGTCCGCACTGTGACaagaagtttaaagtggatatgtTGCTTCAACGGCATATTAAATGGAGTCACCCGGATGATGGGATGATGTATCGTTGTACTGAGTGTGGTAGAACGCTGCCTTCGCTTGCTTGTTTCAAGAAACACATGCAGAATGTTCATTCTTCACAGGATGCTGTCTGCACTATATGTTATAAAGCGTTTAAAACTATGAAAACTCTTAAACGGCATGAAAAACAGATACATGGAAAGGAGAAAGTAGAAACGAAGCCGCCTAAAATAGGGGATCTACCATGCTCACGGTGCGATAGAAAATTTACTACGAACACTGCCTTGTTCTGGCATTTTGAACGCTACCACtcagaaaataaaagaagcaaCGCTTGTCAGATATGCGAGAAAGAGCTGTCAGACCATGGTAGTTTGAAACGGCATTTAGAAATGGTGCATTCTGTAGAATCAGCGCAGTGCCATATTTGCtcaaaaacttttaaaagttACATGAATTTACAAAGGCATATTAGAGTGACCCATGCTCCACCTGAAGCTGCCCAGAATTGTGATATTTGcaataaaacttttaaatgcTCGATGCATTTAAGAATTCATATAAACGCTGTGCACTCGAAGGAAGGTATTTTTACATGTGATGTGTGTAACAAGGAGTTTTCCTCTAAGAAGTACATGTTAAAGCATAAGAAAACCCATGTCGACGTGAAGGAGTACCCTTGCGAGGTTTGTAATAAGTTGTTTAAATGTGTTAATGATGTTAAGAAACACGCGAAACGCGTTCATTTAAAGCCAGCAGCTAAACCTGACGAGCTGAATTGTGTGAAATGCgcaagtaattttaatagcgaATTAGAATTACACGATCATATATTAACGTGCGGAGAATCGCTTATGTTGTCGTTTGTTAAAGTAGAAATTGTTGAAATGCAAGATGATAGTGTATAG
- Protein Sequence
- MEHEIEHIDIKPDIGHLKVEINYQPDPYQTPETVFGLQPEQNDREITTNHNNGSNRNVKTNSAIEIVGKVYENGKVNRLQCPQCDNSFKNRANLKQHLKFVHSSEDDIVECDKCYRTFKSVGHLRSHIHSVHAEEKEVKCEHCGKVFLNKKRLNNHIFYAHPEPEESVNCEVCSKVFKRRYNLKIHMRLVHPSDERSVQCPHCDKKFKVDMLLQRHIKWSHPDDGMMYRCTECGRTLPSLACFKKHMQNVHSSQDAVCTICYKAFKTMKTLKRHEKQIHGKEKVETKPPKIGDLPCSRCDRKFTTNTALFWHFERYHSENKRSNACQICEKELSDHGSLKRHLEMVHSVESAQCHICSKTFKSYMNLQRHIRVTHAPPEAAQNCDICNKTFKCSMHLRIHINAVHSKEGIFTCDVCNKEFSSKKYMLKHKKTHVDVKEYPCEVCNKLFKCVNDVKKHAKRVHLKPAAKPDELNCVKCASNFNSELELHDHILTCGESLMLSFVKVEIVEMQDDSV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00010764;
- 90% Identity
- iTF_00010764;
- 80% Identity
- iTF_00009670;