Basic Information

Insect: Achroia grisella
Gene Symbol: -
Assembly: GCA_030625045.1
Location: JAULSB010000286.1:2827725-2841992[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 3.5e-05 0.0026 18.8 2.9 1 23 421 443 421 443 0.97

2 20 0.0036 0.26 12.5 0.6 1 20 449 468 449 471 0.94

3 20 2.5e-05 0.0018 19.2 5.6 1 23 490 512 490 512 0.98

4 20 9.9e-06 0.00073 20.5 4.9 1 23 518 540 518 540 0.99

5 20 4.2e-05 0.0031 18.5 5.3 1 23 546 568 546 568 0.97

6 20 9.8e-06 0.00072 20.5 7.4 1 23 574 596 574 596 0.97

7 20 6e-07 4.4e-05 24.3 3.0 1 23 602 624 602 624 0.98

8 20 0.00012 0.0089 17.1 6.7 1 23 630 652 630 652 0.97

9 20 0.00012 0.0088 17.1 6.5 1 23 658 680 658 680 0.97

10 20 0.00062 0.046 14.8 0.5 1 16 686 701 686 703 0.96

11 20 5.9e-05 0.0043 18.1 7.9 1 23 724 746 724 746 0.98

12 20 9.8e-06 0.00072 20.5 6.4 1 23 752 774 752 774 0.98

13 20 1.7e-06 0.00012 22.9 5.2 1 23 780 802 780 802 0.98

14 20 8.3e-06 0.00061 20.7 6.2 1 23 808 830 808 830 0.97

15 20 2.8e-05 0.002 19.1 7.3 1 23 836 858 836 858 0.97

16 20 3.6e-06 0.00027 21.9 6.0 1 23 864 886 864 886 0.98

17 20 6.7e-05 0.0049 17.9 7.8 1 23 892 914 892 914 0.97

18 20 2.9e-06 0.00022 22.2 4.1 1 23 920 942 920 942 0.96

19 20 0.00034 0.025 15.7 0.5 1 23 949 971 949 971 0.96

20 20 0.81 60 5.0 4.8 1 23 981 1003 981 1003 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	3.5e-05	0.0026	18.8	2.9	1	23	421	443	421	443	0.97
2	20	0.0036	0.26	12.5	0.6	1	20	449	468	449	471	0.94
3	20	2.5e-05	0.0018	19.2	5.6	1	23	490	512	490	512	0.98
4	20	9.9e-06	0.00073	20.5	4.9	1	23	518	540	518	540	0.99
5	20	4.2e-05	0.0031	18.5	5.3	1	23	546	568	546	568	0.97
6	20	9.8e-06	0.00072	20.5	7.4	1	23	574	596	574	596	0.97
7	20	6e-07	4.4e-05	24.3	3.0	1	23	602	624	602	624	0.98
8	20	0.00012	0.0089	17.1	6.7	1	23	630	652	630	652	0.97
9	20	0.00012	0.0088	17.1	6.5	1	23	658	680	658	680	0.97
10	20	0.00062	0.046	14.8	0.5	1	16	686	701	686	703	0.96
11	20	5.9e-05	0.0043	18.1	7.9	1	23	724	746	724	746	0.98
12	20	9.8e-06	0.00072	20.5	6.4	1	23	752	774	752	774	0.98
13	20	1.7e-06	0.00012	22.9	5.2	1	23	780	802	780	802	0.98
14	20	8.3e-06	0.00061	20.7	6.2	1	23	808	830	808	830	0.97
15	20	2.8e-05	0.002	19.1	7.3	1	23	836	858	836	858	0.97
16	20	3.6e-06	0.00027	21.9	6.0	1	23	864	886	864	886	0.98
17	20	6.7e-05	0.0049	17.9	7.8	1	23	892	914	892	914	0.97
18	20	2.9e-06	0.00022	22.2	4.1	1	23	920	942	920	942	0.96
19	20	0.00034	0.025	15.7	0.5	1	23	949	971	949	971	0.96
20	20	0.81	60	5.0	4.8	1	23	981	1003	981	1003	0.98

Sequence Information

Coding Sequence: ATGAATCCAGAACACCATAATATCAATACGGGTGGTGGCCAGCCTCCTGGAAGTTCCGAGCCACAAACTCAACGAGTGCAGAATGCGCAGCAGCAACAGTCTAGCAATATGCCCGCCACCACTTCAGCTACAGATCTGCGAGTCAATTCGGCCGCCGTAAACGTTGCTTTGTCTAGCGTTGCCAAATATTGGGTGTTTACAAATTTATTCCCGAGCCCGATCCCACAAGTTTCCGTTTATGGACTACCAACTGGGACGAGAATAGAAAATGGAAAACCTGTGCAGGATTTGGGACAAGCACATGCCAGTATATTAAATGGAGACCCTAACATCATACTGGGGCATCATGGTGGCCAACCACAAGTCACTGTTTCAGCTGGAGCGCAACAAATTCCAGTGTCTCAGATTATTGCTACACAATCAGGACAAGCACATGAAGCACTGGTGGCTCATAATCAACAGCAAGAGTTGGCACAACAGGCATCGAGCACCGGAGCACAGGTCACTGTTACCCCAGGCCAGGCCAGTCATCAGCAGGTACCCAATAATCGGGTCGAGTTTGTACACCATAACATTGATATGGGGCATCATTCACAGCAACACTTGATGCAACAACAACTGATGGCTAGTACTCGCCCAGAACACACAAATCAACAGATACAATTAACTGTCAGCGAAGATGGTATTGTAACTGTGGTGGAACCAGGTGGAGGTAAACTCGTGGACAAGGAAGAGCTGCATGAAGCTATCAAAATGCCCACCGATCATACACTCACAGTACACCAACTGCAACAGATAGTAGGGCAACAGGTATTGGATAGTGTGGTTCGCATAGAGCAAGCAACCGGCGAGCCGGCAAACATTCTAGTGACACATAACCCTGATGGAACCACTTCTATAGAAGCTAGCGCAGCAGACTCGTTAGCTATAGTTAAAGATGAAAAAAATGGCAGCAAGATGGAGACAGCTCAGTTTGCAATACCTGCAGATATAAAGGACATTAAGGGTATTGATTTGAAaAGTGTTGGTGCAATGGGAATGGAGGGGGCAGTAGTAAAGATCTCAGCAGGTTCATCAGAACATGATCTCCATGCTATGTACAAAGTAAATGTTGAAGATCTTTCACAATTGCTTGCATATCACGAAGTATTTGGTAAACTTAATGCTGAAGGACAACCACAGGCAAAGGTAATAAATGAAGTGGAAGTAGAGCCAGGTACCAGTGGTGCCATGGCGGAAACAGAGTCTTCCCCAGGCCACCACTCATGTGATATTTGCGGAAAATCGTTCCAGTTTCGCTACCAATTAATTGTTCATAGGCGATATCATGGTGAAAGCAAACCGTATACGTGTCAAGTTTGCGGATCTGCGTTTGCTAATCCCGTCGAACTCTCAAGACACGGAAAATGTCATCTTGCTGGAGATCCAGCCGAGAGACATGCAAAGAGATCAACTCAAGATAAACCTTATGCATGCACTACTTGCCACAAAACGTTTTCTCGAAAAGAACACCTTGATAACCATGTTCGCAGCCATACTGGAGAAACTCCATACAGATGTGAATATTGCTCCAAAACATTCACGCGTAAGGAACATATGGTGAACCACGTGCGAAAGCATACAGGCGAAACACCACATCGCTGCGAGATTTGCAAGAAGAGCTTCACTCGGAAGGAGCACTTCATGAACCATGTTATGTGGCACACAGGTGAAACGCCGCATCATTGTCAAATTTGCGACAAGAAGTTTACTAGGAACGAGCATTTAGTGAACCATATGAGATCGCACACAAACGATACTCCTTTCCGATGCGAACTGTGTGGCAAGTCTTTTACAAGAAAAGAACACTTCACCAATCACATTATGTGGCACACGGGCGAAACACCCCATCGATGCGACTTTTGCTCTAAAACGTTCACGCGTAAGGAGCATCTGTTGAATCATGTCCGGCAACACACGGGTGAATCGCCACATCGCTGCAACTTCTGCTCCAAATCATTTACACGTCGTGAACATCTAGTGAACCATGTCCGACAACATACGGGGGAGACGCCATTCCAGTGCGGCTACTGCCCTAAAGCGTTTACCAGGAAAGACCACCTAGGTAATTATAATGTCTATATAGCATCTTcaaTGAACCATGTCCGCCAGCACACGGGCGAATCGCCACATAAATGTTCATTCTGCACCAAGTCGTTCACTAGGAAGGAGCATTTAACAAATCATGTACGCCAACATACAGGAGAATCGCCCCATCGCTGTTCCTATTGTGCTAAATCGTTTACCAGGAAAGAACATCTTACGAACCATATCAGACAGCATACGGGCGAAACGCCACACAAGTGCACGTACTGCCCGCGCGCGTTCTCCCGCAAGGAACACCTCAACAACCACATTCGCCAGCACACCGGCGACATGCCGCACTCTTGCACCTACTGCAGCAAGAGTTTCACGAGAAAAGAACATCTCGTTAATCATATCAGACAACATACTGGAGAGACACCGTTCAAGTGCACATATTGCACGAAGTCTTTCTCACGGAAGGAGCACCTGACAAACCATGTGCACCTCCACACGGGCGAAACACCACACAAGTGTCCGTTCTGTACTAAAACATTCTCACGGAAGGAGCATTTGACCAACCATGTCAGAATTCACACGGGCGAGTCGCCACATCGGTGCGAGTTTTGCCAGAAAACGTTCACACGAAAGGAACATCTCACCAATCATTTGAAGCAGCACACTGGGGACACACCCCACGCCTGCAAAATTTGTTCCAAGCCATTCACGAGAAAGGAACATCTTGTTACTCATATGAGATCGCACAGCTGCGGTGAGCGCCCATTCAGCTGTAACGAATGCGGTAAATCATTCCCGTTGAAAGGTAATCTACTTTTCCACGAGCGGTCCCACAATAAGGGTAACGGCGGCGCGAGGCCATTCAGATGCGGGATCTGTTCGAAGGATTTCCTTTGTAAAGGACACCTGGTGTCTCATCGGCGGACACACACGGAAACTGCCGGCGGCACAGCGGCAGCAGAGTGCGGCTGCGAAACGACGCCAGACGGCGAGTGCACCAAGTGCGACAAGGGAGATGTTGATCGGCCAGAAAGGAAGCATGACATCAGTCGAGTAGCAACAGAAAACAGACCCACGGAAAGCAATATTACACAAAACCCCCAAAATAGCACAACTGTGATGCAAATAACAAGCCAACAAGTCCGCGCTGGCGTACCAACAAGCGGTGCTGATGTGGCAGGCGTAGCAAGTGTCGCGAGCGTGACGAGTGTGGCGAATGTGGCAGCGGCCGGAACATTTGCACATCCAGCGGCCACCGCACATCACTCCGGCGCCCCCATACACCACCCCGTCACTGTTAATTACTAG
Protein Sequence: MNPEHHNINTGGGQPPGSSEPQTQRVQNAQQQQSSNMPATTSATDLRVNSAAVNVALSSVAKYWVFTNLFPSPIPQVSVYGLPTGTRIENGKPVQDLGQAHASILNGDPNIILGHHGGQPQVTVSAGAQQIPVSQIIATQSGQAHEALVAHNQQQELAQQASSTGAQVTVTPGQASHQQVPNNRVEFVHHNIDMGHHSQQHLMQQQLMASTRPEHTNQQIQLTVSEDGIVTVVEPGGGKLVDKEELHEAIKMPTDHTLTVHQLQQIVGQQVLDSVVRIEQATGEPANILVTHNPDGTTSIEASAADSLAIVKDEKNGSKMETAQFAIPADIKDIKGIDLKSVGAMGMEGAVVKISAGSSEHDLHAMYKVNVEDLSQLLAYHEVFGKLNAEGQPQAKVINEVEVEPGTSGAMAETESSPGHHSCDICGKSFQFRYQLIVHRRYHGESKPYTCQVCGSAFANPVELSRHGKCHLAGDPAERHAKRSTQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCEYCSKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCQICDKKFTRNEHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLGNYNVYIASSMNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCSYCAKSFTRKEHLTNHIRQHTGETPHKCTYCPRAFSRKEHLNNHIRQHTGDMPHSCTYCSKSFTRKEHLVNHIRQHTGETPFKCTYCTKSFSRKEHLTNHVHLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLKQHTGDTPHACKICSKPFTRKEHLVTHMRSHSCGERPFSCNECGKSFPLKGNLLFHERSHNKGNGGARPFRCGICSKDFLCKGHLVSHRRTHTETAGGTAAAECGCETTPDGECTKCDKGDVDRPERKHDISRVATENRPTESNITQNPQNSTTVMQITSQQVRAGVPTSGADVAGVASVASVTSVANVAAAGTFAHPAATAHHSGAPIHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00925938;
90% Identity: iTF_00736791;
80% Identity: -