Aeph003344.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Acentria ephemerella
Gene Symbol
-
Assembly
GCA_943193655.1
Location
CALPDL010000017.1:5284135-5288944[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.13 9.2 7.2 3.4 2 22 195 215 194 215 0.95
2 16 2.6 1.8e+02 3.2 1.0 1 23 314 336 314 336 0.82
3 16 0.46 31 5.5 0.5 2 23 466 487 465 487 0.96
4 16 0.14 9.9 7.1 0.3 3 23 565 585 563 585 0.96
5 16 0.071 4.8 8.1 1.9 1 23 593 615 593 615 0.98
6 16 0.094 6.4 7.7 3.4 1 23 649 671 649 671 0.95
7 16 0.00018 0.013 16.2 4.0 1 23 679 701 679 701 0.99
8 16 0.73 50 4.9 1.9 1 23 780 802 780 802 0.97
9 16 0.66 45 5.0 1.8 1 19 858 876 858 880 0.93
10 16 0.55 37 5.3 1.2 1 23 886 908 886 908 0.96
11 16 0.0084 0.58 11.0 0.4 1 23 976 998 976 998 0.93
12 16 0.011 0.75 10.7 1.1 1 23 1004 1026 1004 1026 0.96
13 16 0.0051 0.35 11.7 2.6 1 23 1115 1137 1115 1137 0.97
14 16 0.00013 0.0088 16.7 1.4 1 23 1143 1165 1143 1165 0.99
15 16 0.19 13 6.8 1.5 1 23 1255 1277 1255 1277 0.95
16 16 0.037 2.5 9.0 7.8 1 23 1288 1310 1288 1310 0.98

Sequence Information

Coding Sequence
ATGGGTCTACAAAACGCTGAAAAAGACATAATTAGCTGCCACAGCGATTCAAATGATGCCACAGATACGAGTGCCAAAAAAGACGCAGTTGATTTGGCACCAAATGGACAAAATCAACTGTCACCAAACTACATGTCAGATGAGGCAAAATCACAGAAACAAAACAGGAAACCTCCAAGACCACTACCACCGCTCATACCATTGCACGCATCAACACCCAATCAAAACAAAACATCAACTGGGGAGCCACCATTGAAAAAATTCAAGGAAAATCCTTGTTCTGATGTGACAGATTCCAACAAAAAAAACAAATTTGAAAATTTGTCTGTTGATATTAGTCTAATACCTGTGCATAGCAATCCTTCTAATAGTAAGGAAACAGCACGGAAGAAAAATGAATCATTTTTCGACAAACTTAAAGAAAGACTTTTAACAGAGACTGGTGAAGAAGGGTCTCTAATATGTAAAAATTGTGGTTTCGAAAGCAAATGCTTGTCAGAACATTCCGTACATGAAAAAAATTGTACTTCACATTTAAACCGCATGTCGACCAACACTTTACTTCCCAGTATGAGTTCAACACGTTGCCAAAATTGTAGGCACAGGTGCAAATCTAGTGCAGATCTATACGTTCACATGCAAACTTGCATGAAAAGTGAGCTAGTCAAAGACGACACGACTATGGAAATAAAAAGTCAAGACAGTAATGATGGTGTTATATCAACTCAAGATAGAGATATAGAACCACATCCGATGGAAAATGTTGTTTTCGTTTGGAATAATATTAGTCATAACCCAAATAAATATGATACTCCGTTAGATATTAATATTAATGATGATTCCACTCTTCCTGAAATAAATAGAAGCTATGATCCGGATGTTACTGATGACAACGAAGGCATGAACTTGTCTCCAAGTCAAGCTATGGGAAAGAAAGTTTTTAAATGTCCTCATTGTCCTTTCTGGGCGTCTACTGCGTCAAGATTTCACGTACATATTGTAGGGCATTTGAATAAGAAACCCTTCGAATGTTCTCTGTGTAAATATAAATCTAATTGGCGTTGGGATATCACAAAGCACATCAAACTAAAGTCAGCTAGGGATCCAGATCATAATGATGCGAAAGTACTTATGACGGACGAGACCGGCCGAAGAAACTACAGTAAATACAATAAATTCTTAGCTATGTCAATACCAAATGAAAATGGCGAAAATGTATTTCATTATTTAGATTTGAATGCTTCGGCTGATGCCTCCATGGAAATGGATGAACCGTTCAATGATATGAGTGACACTATTAATACTAATCATCCACTTGATGTACAGCCACTGAATTTACAAACATACAACAATGAACAACAATATGATTCCAAGAAGCCTAAAAGAACTTTATGGAAATGTAAAAGATGCAATTATAGAGATTCGTCTAAAGAAGCTTTATTAGAACACGTACGTGAACATTCGCGGGCTGATGGAAATCCAGATGATACGAAAACGCTTAAAAAACCTGATAACCCTCCAGACCCAGCAGACTTGGCATATCGCTGTGGTCACTGTAACCAACTATCAAACTGGAAGCACGTTATACAGAGACATTGCCGTCTGAAACACGATGGCGTTATAAAAGTAATAACAACAGTGAAGCCAAAACCAGATTCATCAGTATCGTTGAACGATATCAGTGGTGATGCCTGCAACAAATGCCCCTTTAAGACCAACGATAAAAAGTTGATGTTAGCACATCTTCAGGGACACCAACCTTCGCCACAGTCTATATTTAAATGCTTCTTCTGCCCATTCTTTGTTAAAGACGAACACGAGCTTATACAGCATTTGACTATACATGGAGTGACTGAGCCAGAAGAATATATTGCTAAAGCTATGGGTCGAAAATCTCCATCGGCTGAGTCAAGTACTCCAAATACATCGTGTGGTAATAAACGACATAAATGTACTGAATGTCCATATGAAACAAACAGTAAATCGCAATATATGTACCATGAACAATTCCATCGACTACCTGCTGACACACCTTATAAGTGTCCCGAGTGCAATTACAGTGTGTCCAAAAGACATTTACTACATCAGCATCTACGGGTTCATGGAATATTAACGAAAAAAAATGAAACAGAAGCAGAACTTGAAGCGAAGTTGGATTCAAAGATTGAACTGTCAATTAATCTTGATGAGATTCCATTTGTTTGGGTTTCAGCTAAAAATGAATTTCATAAAATGTATAAATGCCGTTATTGTTCTTACGTTAATTCACAGAAGTGTAAAATTCCAAACCATGAAAAAATACATTTTATCGTTTTCGAAAATACTGATGTTACCGTTTATAAGTGCTTGGAATGTAAATTTACGTGCGATAGTGCCATACGATTAGCTGAACATTCTAAAAGTCACGGTGAAATATACGGTCGCATTTACTGTCCCGTAGAGATTGATATTCCAGATGAAGAACAAATAGCTAAATTACGTAAAGTTATTGAATCTGAAAAGATTAACGTTTCCGAAGGTATATTGAAAGAAGAAAAAGCTGTGAATGAAAATAATGAAACAAAAATTCTGTACTTTTGCCAAATGTGCCCAAGTAGATTTTTCTCTTATGATGAGCTTAAAATTCATGATAAATTTCACGACTTATCATTTCCACATAAATGTAAAAGTTGTGAATTTTCCGTTCCCGAAGAAAGCGATTTATGTACTCATGCTGCTATTCATACTGACGAATATCACACTAAAACAAAAATGCTTAAATTCATACATAACACACACGGCGCATATAAACAACCAAACCTTGAACTTGTGCACTGCCCAACTACATCGGAAATTATGTGGGTTGTTTTACATCCACGTAGAAATTGTGAACCTGACAATACCAGCAATAAAAGAACAAATGATACAAAACATGTCCCTAAACAATACCTATGCAAAGAGTGTCCTGCAAAGTTTTTCAAAAGTTCTGCGCTTAGTTATCATATGGGACTCCATGGCGGGGAAGGTGATCATAAATGTAAAAAATGCAGTTACGCTGTGAAGAACATTGGAAATTTGGCTAAACATGAACTGTTACATGAAAATGAGGGCAAAAATACTTGTGACTACGAATCCGGAGAAGATATGGATTATAAAAATATTCCCTTATCGGGAACCGACCTATTTCAAAGAAAGACTGAAGCTCAAAAGAGAGTTCTTAACGACAAAGACAAATTAGTGAAACCAAATGACCATTTTCCACCTTTACTACAAGCTGACCCTCAATTTGGTTATTTAATGCATGGAAATCCAGAATTTATATATCCAACATATTTAAAAAATGGTCGTCAAAAGGAAAAACGATACAAATGCCACAAATGTCCTTCAGCATTTGAGAAAAGAGAACAATATAAAATACATTTATCACTACACGGGTCCAAACAAAGATATAAATGTGAACTATGCGATTATTCCGTTAAGTATTACGCTAATTACGTTCAACACATGAGAAAACATCAAATGAACGACGAAGCATTGGCGGAGAGAAAGAAAAATACTAGTGGTTTTATTGAATCCGAACTTCAAGAAAATAAAAATGAAGATAATGATAACATTAAATTAGCAATAAAAACTATGCCAAAAGGAATACCGAAAAGTGATTTTCAACAATTTTCAGTTCGTGACCAACAGACTCTGCGATTATTGCAACGCAGGCGTTCCATAAATAGCAATAAAGAACAATCATCACCCTCTGAAACATCTCCTGCAAAAGATCGTAAGTTACATATTTGTTTACTGTGTCCATACTCAAATCAAAGGCAAGACGCACTAAATAATCATTACAGGAGACACGATGATTTCGATATTCTTAATGTTGGAAATCATAAATGTTCTCACTGTGACTTGGTTGTAGTTCACTCACATTTCCTTCGTGAGCATTTGAAAACTCATTTTATGTATCAAAAGAATCTTACCCCAGAATGTTATGTTGCCAATGAGGATGTAAGTTTCACTATAAGTAAAGTAGATGATGAAGAGGAATCTACTGATCTCAAGTTAGATATAGATATACAAACCGAGAGTAGTAAGTGCAATGAAAACAAATTATTTGTCAAACTCCAAACGGGAGAACTTGTAGTAGAATAA
Protein Sequence
MGLQNAEKDIISCHSDSNDATDTSAKKDAVDLAPNGQNQLSPNYMSDEAKSQKQNRKPPRPLPPLIPLHASTPNQNKTSTGEPPLKKFKENPCSDVTDSNKKNKFENLSVDISLIPVHSNPSNSKETARKKNESFFDKLKERLLTETGEEGSLICKNCGFESKCLSEHSVHEKNCTSHLNRMSTNTLLPSMSSTRCQNCRHRCKSSADLYVHMQTCMKSELVKDDTTMEIKSQDSNDGVISTQDRDIEPHPMENVVFVWNNISHNPNKYDTPLDININDDSTLPEINRSYDPDVTDDNEGMNLSPSQAMGKKVFKCPHCPFWASTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPDHNDAKVLMTDETGRRNYSKYNKFLAMSIPNENGENVFHYLDLNASADASMEMDEPFNDMSDTINTNHPLDVQPLNLQTYNNEQQYDSKKPKRTLWKCKRCNYRDSSKEALLEHVREHSRADGNPDDTKTLKKPDNPPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVITTVKPKPDSSVSLNDISGDACNKCPFKTNDKKLMLAHLQGHQPSPQSIFKCFFCPFFVKDEHELIQHLTIHGVTEPEEYIAKAMGRKSPSAESSTPNTSCGNKRHKCTECPYETNSKSQYMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGILTKKNETEAELEAKLDSKIELSINLDEIPFVWVSAKNEFHKMYKCRYCSYVNSQKCKIPNHEKIHFIVFENTDVTVYKCLECKFTCDSAIRLAEHSKSHGEIYGRIYCPVEIDIPDEEQIAKLRKVIESEKINVSEGILKEEKAVNENNETKILYFCQMCPSRFFSYDELKIHDKFHDLSFPHKCKSCEFSVPEESDLCTHAAIHTDEYHTKTKMLKFIHNTHGAYKQPNLELVHCPTTSEIMWVVLHPRRNCEPDNTSNKRTNDTKHVPKQYLCKECPAKFFKSSALSYHMGLHGGEGDHKCKKCSYAVKNIGNLAKHELLHENEGKNTCDYESGEDMDYKNIPLSGTDLFQRKTEAQKRVLNDKDKLVKPNDHFPPLLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEALAERKKNTSGFIESELQENKNEDNDNIKLAIKTMPKGIPKSDFQQFSVRDQQTLRLLQRRRSINSNKEQSSPSETSPAKDRKLHICLLCPYSNQRQDALNNHYRRHDDFDILNVGNHKCSHCDLVVVHSHFLREHLKTHFMYQKNLTPECYVANEDVSFTISKVDDEEESTDLKLDIDIQTESSKCNENKLFVKLQTGELVVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00279598;
90% Identity
iTF_01082032;
80% Identity
-