Basic Information

Insect: Acentria ephemerella
Gene Symbol: -
Assembly: GCA_943193655.1
Location: CALPDL010000193.1:28414-44390[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.00028 0.019 15.7 4.2 1 23 422 444 422 444 0.97

2 20 0.0039 0.27 12.0 0.6 1 20 450 469 450 472 0.94

3 20 2e-05 0.0014 19.3 5.6 1 23 491 513 491 513 0.98

4 20 1.8e-05 0.0012 19.4 3.9 1 23 519 541 519 541 0.99

5 20 3.3e-05 0.0023 18.6 5.3 1 23 547 569 547 569 0.97

6 20 8.9e-06 0.00061 20.4 7.9 1 23 575 597 575 597 0.97

7 20 1.1e-07 7.8e-06 26.3 1.2 1 23 603 625 603 625 0.97

8 20 9.6e-05 0.0066 17.1 6.7 1 23 631 653 631 653 0.97

9 20 9.5e-05 0.0065 17.1 6.5 1 23 659 681 659 681 0.97

10 20 4.6e-07 3.1e-05 24.4 1.9 1 23 687 709 687 709 0.98

11 20 4.7e-05 0.0032 18.1 7.9 1 23 715 737 715 737 0.98

12 20 7.8e-06 0.00054 20.5 6.4 1 23 743 765 743 765 0.98

13 20 6.2e-06 0.00042 20.9 6.5 1 23 771 793 771 793 0.98

14 20 8.2e-05 0.0056 17.3 5.6 1 23 799 821 799 821 0.96

15 20 2.1e-05 0.0014 19.2 7.1 1 23 827 849 827 849 0.97

16 20 7.2e-06 0.00049 20.7 6.1 1 23 855 877 855 877 0.98

17 20 1e-05 0.00071 20.2 7.6 1 23 883 905 883 905 0.97

18 20 4.3e-06 0.0003 21.3 5.0 1 23 911 933 911 933 0.97

19 20 0.00069 0.047 14.4 0.3 1 23 940 962 940 962 0.96

20 20 0.55 38 5.3 3.0 1 23 971 993 971 993 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.00028	0.019	15.7	4.2	1	23	422	444	422	444	0.97
2	20	0.0039	0.27	12.0	0.6	1	20	450	469	450	472	0.94
3	20	2e-05	0.0014	19.3	5.6	1	23	491	513	491	513	0.98
4	20	1.8e-05	0.0012	19.4	3.9	1	23	519	541	519	541	0.99
5	20	3.3e-05	0.0023	18.6	5.3	1	23	547	569	547	569	0.97
6	20	8.9e-06	0.00061	20.4	7.9	1	23	575	597	575	597	0.97
7	20	1.1e-07	7.8e-06	26.3	1.2	1	23	603	625	603	625	0.97
8	20	9.6e-05	0.0066	17.1	6.7	1	23	631	653	631	653	0.97
9	20	9.5e-05	0.0065	17.1	6.5	1	23	659	681	659	681	0.97
10	20	4.6e-07	3.1e-05	24.4	1.9	1	23	687	709	687	709	0.98
11	20	4.7e-05	0.0032	18.1	7.9	1	23	715	737	715	737	0.98
12	20	7.8e-06	0.00054	20.5	6.4	1	23	743	765	743	765	0.98
13	20	6.2e-06	0.00042	20.9	6.5	1	23	771	793	771	793	0.98
14	20	8.2e-05	0.0056	17.3	5.6	1	23	799	821	799	821	0.96
15	20	2.1e-05	0.0014	19.2	7.1	1	23	827	849	827	849	0.97
16	20	7.2e-06	0.00049	20.7	6.1	1	23	855	877	855	877	0.98
17	20	1e-05	0.00071	20.2	7.6	1	23	883	905	883	905	0.97
18	20	4.3e-06	0.0003	21.3	5.0	1	23	911	933	911	933	0.97
19	20	0.00069	0.047	14.4	0.3	1	23	940	962	940	962	0.96
20	20	0.55	38	5.3	3.0	1	23	971	993	971	993	0.98

Sequence Information

Coding Sequence: ATGAATCCAGATCACCATAGTATCAATACGGGTGGTGGCCAACCTCCTGGAAGTTCGGAGTCGCAGAATCAAAGAGTTCAAAGTGCGCAGCAACAGCAGCAGACCAGCAATTTGCCCGCCACAACCTCTGCGACCGACCTCAGAGTCAACTCCGCGGCAGTGAACGTAGCTTTGTCTAGCGTCGCTAAATATTGGGTGTTTACAAATTTATTTCCGGGTCCTATTCCACAAGTTTCTGTTTATGGGCTACCCACTGGGCCTAGAATTGAAAATGGAAAGCCTGTCCAGGATCTTGGCCAAACACATGCAAGTATACTCAATGGAGATCCTAATATCATATTGGGACACCACACTGGGCAGCCACAAGTCACGGTTTCAGCTGGGGGAGCTCAGCAGATACCTGTATCTCAAATCATTGCTACACAGTCTGGACAAACACATGaagctctagtggctcataatcagcagcaagagctggcagctcaacaagcatcaaGCAACACACAGGTCACTGTAAGCCCAGGGCAGTCCACTCATCAGCAGGTACCCAATAATCGGGTCGAATTTGTACAACACCATAGCATTGATATGGTAAATCACGTGGGGCATCATTCACAACAGCACTTGATGCAACAACAACTTATGGCCAGCACTCGTCAAGAACACTCTAATCAACAGATCCAGCTGACAGTGAGTGAAGATGGTATTGTCACAGTGGTCGAACCAGGCGGCAAGTTGGTGGATAAGGAAGAACTTCATGAAGCCATTAAGATGCCTTCAGACCACACGCTCACGGTGCATCAACTGCAGCAGATTGTCGGGCAACAGGTAATAGATAGCGTAGTTCGCATAGAGCAAGCTACTGGAGAACCAGCCAATATACTAGTGACACATAATCCTGATGGTACAACTTCAATAGAGGCCAGTGCTGGCGATCAACTCATAGTCAAAGATGAGAAGAATGTATCCAAAATTGAGACAGCTCAGTTTGCAGAGATTAAAGATATAAAGGGCATTGACTTAAAGAGTGTAGGCGCAATGGGTATGGAAGGAGCTGTAGTTAAAATCTCAGGCGCGTCAGATCACGACCTACATGCCATGTATAAAGTCAATGTGGAGGATTTATCTCAGCTGCTAGCTTACCATGAAGTGTTCGGGAAGCTTAATGCTGAGGGGCAACAACAACAAACAAAGGTAATAAGTGAAGTGGATGTAGAACCAGGCCCGAGTACTGGCTTGGCAGAAGCAGAATCATCAGAACATCACTCATGTGACATATGTGGAAAAATATTTCATTTCCGCTACCAACTTATTGTTCACAGACGATATCATGGAGAAAGCAAACCTTTCACTTGTCAAGTGTGTGGTTCAGCTTTCGCTAATCCAGTTGAATTATCAAGACATGGAAAATGCCATCTTGCTGGAGATCCAGTAGAAAGACACGCTAAAAGACTAACACAAGACAAACCGTATGCCTGCACTACTTGCCACAAGACATTCTCCCGGAAAGAACACCTTGATAACCATGTCCGCAGTCACACTGGCGAGACTCCATATAGAtgtgaatactgcgctaagacattcacccgcaaggagcacatggtaaaccatgtccgcaagcacaccggcgaaacgccacaccgctgcgagatctgcaaaaagagctttaccaggaaggaacacttcatgaaccatgtcatgtgGCATACTGGTGAAACGCCACATCATTGCCAAATATGCGGCAAGAAGTATACTAGGAAGGAGCATTTAATGAACCATATGAGATCGCATTCAAATGATACGGCGTTTAGATGCAATGTGTGCGGAAAGTCGTTCACGAGAAAGGAAAACTACAACAATCACATTTTATGGCACTCCGGTGAGACACCTCATCGATGTGACTTCTGCTCAAAAACGTTCACTCGCAAAGAGCACCTGTTAAACCATGTCCGCCAGCACACGGGTGAATCCCCGCATCGATGCAACTTCTGCTCAAAGTCGTTTACACGCCGCGAGCACCTCGTCAACCACGTCAGGCAGCATACCGGCGAGACGCCCTTCCAGTGTGGATACTGTCCCAAAGCTTTTACGAGGAAAGACCACTTAGTGAACCACGTACGGCAACACACTGGAGAATCGCCCCACAAATGCTCTTTCTGCACCAAATCGTTTACACGCAAAGAACATCTTACGAACCATGTGCGTCAACACACGGGCGAGTCACCGCACCGCTGCAGCTATTGCGCAAAGTCCTTCACCAGGAAAGAACATCTGACAAACCATATCAGACAGCACACGGGTGAAACTCCACACAAGTGCACGTACTGCACGCGCGCGTTTTCGCGCAAGGAACATCTCAACAACCACATCCGGCAGCACACGGGTGACATGCCACACGCCTGCACTTTCTGCACCAAGACCTTTAACCGGAAGGAGCATCTCGTCAACCATATCAGGCAACATACAGGCGAGACGCCGTTCAAGTGCACGTACTGCTCAAAGTCGTTCTCGCGCAAGGAGCACCTCACCAACCACGTGCACCTGCACACCGGCGAGACTCCGCACAAGTGCGCATTTTGCACTAAGACCTTTTCGAGGAAGGAGCATTTAACTAACCATATCAGAATACATACTGGGGAGTCACCACATCGCTGTGAATATTGTCAGAAGACATTTACTCGTAAGGAGCACCTAACGAATCACCTGAAACAACACACTGGTGACACACCACACTCTTGTAAAGTTTGCTCTAAACCATTTACCAGAAAAGAGCATCTAGTTACACATATGAGATCGCATAGTTGTGGCCAACGGCCCTTCAGCTGTGGCGAGTGTGGAAAATCGTTTCCTCTTAAAGGCAATCTTCTATTCCATGAAAGATCGCATAATAAAAACAGTGGCTCGCGATCATACCGCTGTGATGTTTGCGCCAAGGACTTCCTCTGTAAAGTTCACTTAGCGGCGCACCGGCGAACGCACAATGAAACAACCGAAGGTGGCGCTAGTGTAGAAGCTCCTGCTGAGACTGAAGACTGCGGCGACTGCAATAAATGTGAGAAGATCGATACCGAACGCACAGAAAGGAAACATGAAATCAGAACAACTACAGAGAGCAGGTCAGCTGAAAGTAATGTAGCACAAAATCAACAAACTAATGCAACTGTAATGCAAATCACGAGTCAACAGGTTCGTGCGGCAACGAGTGTCGCTAGCGGCTCCAGTGCGGCCAGCGGTGTACCGAGCACGTTCACAGTGAGTGCGCAGCATCATGCTGGCGCCACGCTCTCACACCACCCGGTCACCGTCAACTACTAG
Protein Sequence: MNPDHHSINTGGGQPPGSSESQNQRVQSAQQQQQTSNLPATTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGPRIENGKPVQDLGQTHASILNGDPNIILGHHTGQPQVTVSAGGAQQIPVSQIIATQSGQTHEALVAHNQQQELAAQQASSNTQVTVSPGQSTHQQVPNNRVEFVQHHSIDMVNHVGHHSQQHLMQQQLMASTRQEHSNQQIQLTVSEDGIVTVVEPGGKLVDKEELHEAIKMPSDHTLTVHQLQQIVGQQVIDSVVRIEQATGEPANILVTHNPDGTTSIEASAGDQLIVKDEKNVSKIETAQFAEIKDIKGIDLKSVGAMGMEGAVVKISGASDHDLHAMYKVNVEDLSQLLAYHEVFGKLNAEGQQQQTKVISEVDVEPGPSTGLAEAESSEHHSCDICGKIFHFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSRHGKCHLAGDPVERHAKRLTQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCEYCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLMNHMRSHSNDTAFRCNVCGKSFTRKENYNNHILWHSGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCSYCAKSFTRKEHLTNHIRQHTGETPHKCTYCTRAFSRKEHLNNHIRQHTGDMPHACTFCTKTFNRKEHLVNHIRQHTGETPFKCTYCSKSFSRKEHLTNHVHLHTGETPHKCAFCTKTFSRKEHLTNHIRIHTGESPHRCEYCQKTFTRKEHLTNHLKQHTGDTPHSCKVCSKPFTRKEHLVTHMRSHSCGQRPFSCGECGKSFPLKGNLLFHERSHNKNSGSRSYRCDVCAKDFLCKVHLAAHRRTHNETTEGGASVEAPAETEDCGDCNKCEKIDTERTERKHEIRTTTESRSAESNVAQNQQTNATVMQITSQQVRAATSVASGSSAASGVPSTFTVSAQHHAGATLSHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01071806;
90% Identity: iTF_01081793;
80% Identity: -