Basic Information

Insect: Abscondita cerata
Gene Symbol: -
Assembly: GCA_030710515.1
Location: JALBCR010000284.1:10923-26178[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 8.3 2.9e+03 1.4 0.0 1 10 415 424 415 429 0.84

2 17 1.5e-05 0.0053 19.4 0.8 1 23 457 479 457 479 0.98

3 17 4.8e-05 0.017 17.9 4.4 1 21 485 505 485 507 0.95

4 17 2.7e-05 0.0093 18.7 4.6 1 23 513 535 513 535 0.99

5 17 2.6e-05 0.0088 18.7 5.3 1 23 541 563 541 563 0.97

6 17 4.3e-06 0.0015 21.2 7.2 1 23 569 591 569 591 0.97

7 17 1e-07 3.4e-05 26.3 2.7 1 23 597 619 597 619 0.98

8 17 7.4e-05 0.025 17.3 6.7 1 23 625 647 625 647 0.97

9 17 2.8e-05 0.0096 18.6 4.5 1 23 653 675 653 675 0.97

10 17 4.7e-07 0.00016 24.2 2.8 1 23 681 703 681 703 0.98

11 17 6.7e-06 0.0023 20.6 7.9 1 23 709 731 709 731 0.98

12 17 3.7e-05 0.013 18.3 5.1 1 19 737 755 737 756 0.96

13 17 0.023 7.8 9.5 4.4 7 23 755 771 755 771 0.96

14 17 5.3e-05 0.018 17.7 7.0 1 23 777 799 777 799 0.96

15 17 5.2e-05 0.018 17.8 0.8 1 23 805 827 805 827 0.98

16 17 0.026 9 9.3 5.1 1 23 837 859 837 859 0.98

17 17 6.7e-07 0.00023 23.7 0.8 1 23 865 887 865 887 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	8.3	2.9e+03	1.4	0.0	1	10	415	424	415	429	0.84
2	17	1.5e-05	0.0053	19.4	0.8	1	23	457	479	457	479	0.98
3	17	4.8e-05	0.017	17.9	4.4	1	21	485	505	485	507	0.95
4	17	2.7e-05	0.0093	18.7	4.6	1	23	513	535	513	535	0.99
5	17	2.6e-05	0.0088	18.7	5.3	1	23	541	563	541	563	0.97
6	17	4.3e-06	0.0015	21.2	7.2	1	23	569	591	569	591	0.97
7	17	1e-07	3.4e-05	26.3	2.7	1	23	597	619	597	619	0.98
8	17	7.4e-05	0.025	17.3	6.7	1	23	625	647	625	647	0.97
9	17	2.8e-05	0.0096	18.6	4.5	1	23	653	675	653	675	0.97
10	17	4.7e-07	0.00016	24.2	2.8	1	23	681	703	681	703	0.98
11	17	6.7e-06	0.0023	20.6	7.9	1	23	709	731	709	731	0.98
12	17	3.7e-05	0.013	18.3	5.1	1	19	737	755	737	756	0.96
13	17	0.023	7.8	9.5	4.4	7	23	755	771	755	771	0.96
14	17	5.3e-05	0.018	17.7	7.0	1	23	777	799	777	799	0.96
15	17	5.2e-05	0.018	17.8	0.8	1	23	805	827	805	827	0.98
16	17	0.026	9	9.3	5.1	1	23	837	859	837	859	0.98
17	17	6.7e-07	0.00023	23.7	0.8	1	23	865	887	865	887	0.96

Sequence Information

Coding Sequence: ATGAGTTCGAACGAACAGAATCATTTTAATGGGGCTCAGTCACAGACTGAAAATTCAGAGgTTAGTACACAGCGGCCACCTCCCGCTACATCTGTACCCACTGATCTTAGAGTTAATACTACAGCTTTAAATGCGGTCGCTTTAAGCAGTGTAGCAAAGTATTGGGTTCTTACAAATTTATTGCCGGGACCTATTCCCCAAGTGTCTGTGTATGGACTACCTAGTTCAGGACGTAACGATGGGCAAACGAAGATATCACAGgaAGCTATGTTAAGCCAACACGGAGGTCTCTTACAAGCCGACCCGTTGCTTCTACAACAACACGCTCAAATACCAGTTAGTATATCAACTTCTCAAGGCATCACGAATCTATCTATTCCTGCAAATGCGATGCATTTAGAAAGCACACAAAATCACAATCAGGCCTTATCTAACCATCAACACAACGAAGGTCAAGTGATTGTTAGTCCATCGCAAAGTCAGCTCTCGCATGCACAGTTACAAAGTGCCCAGAATCATGCACAACAGTCTcaacaaaatattgtacaagTACAAGTCGAAGATAACTTAGTTTCCGTGATTGAAGATAGTAAAGATCATAAAGACTTGATAGCGTCTCAATTGGCTCAAGCTCAAATACATTTAAACGAAAATCAACAATTAAGCCAACAAACGTTAACGGTTCAACAGTTGCAGCATTTACAAGTTCAGCAGGTATTGGATAATGTTGTAAGAATGGAAGCTGGCGTTGAAAATGGACCAAATCATTCGGAACAAGATCCCTTAGCCGGTACAGACATACCCATTATTAAAGATGAAAAAGGTTTGCAGAATTGTACGAAATTGCTTGGGGCTCAATTTGGTTTGCAAGATTCAAAAGCGAATTTAATGGACATTCGAACTGTAGACGGCAGTATAGTTAAAATAGCGGCAGGTATACAGGACCAAGACTTAGCTAAAACTTTAGGTGTTGAAATGGTGCAAAATATGTACAAAGTTAATGTAGACGATATTAATCAATTACTTGCATATCACGAAGTGTTTGGAAAATTACAGGGTGAAATCACAACGGGACAAACCAACGTTTCCGCTAATAATGCTAATTTGAATTTGCAACAAACTGCGAACGCGATTGCGAGCAATATTCAAATCGTTACTCCGAAAACTATGGCGGAGAATGAACAAGAGGCAACGACAAGCGCAATCGCTGCCGACAGTCCTCCAGCCATTATTGCGGGAAACCACGTGTGCGACTTGTGTGGTACCACACTGAAAGAAAACCTTTTACGTGTCAAGTCTGTGGAAAGGCGTTTACGAACGCCCAAGAACTTACCAGAACATGGAAAATGTCATTTAGGCGGTAGCATGTTTACTTGCGCCGTATGTTTTCATGTGTTTGCCAACGCCGCTTCCTTGGAAAGACACATGAAGAGACATTCGACGGATAAACCTTACAATTGTACGATTTGCGGAAAATCTTTTGCCAGAAAGGAACACTTAGATAATCATACAAGATGTCATACTGGAGAAACTCCTTATAGGTGTCAGTATTGTGCTAAAACGTTTACGAGAAAGGAACACATGGTTAATCATGTGCGAAAACATAcagGAGAAACGCCACACAGATGCGAAATCTGCAAGAAATCCTTTACAAGAAAAGAACACTTCATGAATCACGTGATGTGGCACACAGGCGAAACCCCTCACCATTGCACAATTTGCGGTAAAAAGTACACGAGAAAAGAACATTTAGCGAATCACATGCGATCTCATACGAACGATACGCCATTCAGATGCGAGATTTGTGGAAAGTCTTTCACCAGAAAAGAACATTTCACAAATCACATAATGTGGCACACCGGCGAGACGCCTCATAGGTGCGACTTTTGTTCGAAAACATTCACAAGGAAAGAGCACTTATTAAATCACGTCCGTCAGCACACTGGCGAATCGCCGCATCGATGCGCTTACTGCGCAAAATCGTTTACTCGCAAAGAGCATCTTATCAATCACGTTAGGCAACACACCGGTGAGACTCCCTTCCGTTGTAGCTATTGTCCTAAGGCTTTTACGAGAAAGGATCACTTGGTTAATCACGTGCGTCAGCACACTGGCGAGTCCCCACACAAATGTACATACTGTACAAAATCTTTCACGAGGAAAGAACACTTAACAAATCACGTGCGACAGCACACCGGTGAATCTCCGCATCGTTGCCATTACTGCTCGAAATCGTTTACAAGAAAGGAACACTTAACGAATCACAAGACTTTTACAAGGAAGGAACATTTGACTAATCACTTGCGTCAACATACTGGCGAAACTCCCCATTGTTGCGAGGTGTGTTTTAAGCCGTTCACTCGTAAGGAACATTTGGTGAATCACATGAGGTCGCACACCGGTGAACGTCCGTTTTCGTGTACCGAATGTGGCAAATCGTTTCCTTTGAAAGgaaatttattgtttcatcAACGTTCGCATAATAAGGGTGCGGATGCTGATCGTCCATTTAGATGTGATCTTTGTGACAAAGACTTTATGTGCAAAGGTCATTTAGTCTCACATCGAAGATCCCACACCGGAGAACGTCCACACGCGTGTCCCGACTGTGGCAAAACTTTCGTCGAAAAAGGAAACATGTTGCGACATTTACGCAGGCACACTATTGAAAATGGTCAAACTCAGGCTACGGTGAATCAAGTTGCGACTAACTCCGTTGTCGGTAATCAGgcacaacaacaaacaaatactACTTCGGTGCAAACTTCCGCCCCAGCTACTATTCAAATTCCACAAGTTAGTCAAAGTCAGGCGCTGACAAGCACCGTTTCGACTGCTAACATTGTAAGTACTGGAAATATAGTACAACAGACACATATACCGATTCACCAACAAAATAACCACCCTGTCGTTCCTGCAGCTAATTCGAGTATTTTAGCTTCCTACtcatag
Protein Sequence: MSSNEQNHFNGAQSQTENSEVSTQRPPPATSVPTDLRVNTTALNAVALSSVAKYWVLTNLLPGPIPQVSVYGLPSSGRNDGQTKISQEAMLSQHGGLLQADPLLLQQHAQIPVSISTSQGITNLSIPANAMHLESTQNHNQALSNHQHNEGQVIVSPSQSQLSHAQLQSAQNHAQQSQQNIVQVQVEDNLVSVIEDSKDHKDLIASQLAQAQIHLNENQQLSQQTLTVQQLQHLQVQQVLDNVVRMEAGVENGPNHSEQDPLAGTDIPIIKDEKGLQNCTKLLGAQFGLQDSKANLMDIRTVDGSIVKIAAGIQDQDLAKTLGVEMVQNMYKVNVDDINQLLAYHEVFGKLQGEITTGQTNVSANNANLNLQQTANAIASNIQIVTPKTMAENEQEATTSAIAADSPPAIIAGNHVCDLCGTTLKENLLRVKSVERRLRTPKNLPEHGKCHLGGSMFTCAVCFHVFANAASLERHMKRHSTDKPYNCTICGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCTICGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCAYCAKSFTRKEHLINHVRQHTGETPFRCSYCPKAFTRKDHLVNHVRQHTGESPHKCTYCTKSFTRKEHLTNHVRQHTGESPHRCHYCSKSFTRKEHLTNHKTFTRKEHLTNHLRQHTGETPHCCEVCFKPFTRKEHLVNHMRSHTGERPFSCTECGKSFPLKGNLLFHQRSHNKGADADRPFRCDLCDKDFMCKGHLVSHRRSHTGERPHACPDCGKTFVEKGNMLRHLRRHTIENGQTQATVNQVATNSVVGNQAQQQTNTTSVQTSAPATIQIPQVSQSQALTSTVSTANIVSTGNIVQQTHIPIHQQNNHPVVPAANSSILASYS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00153712; iTF_00854261;
90% Identity: iTF_00153712; iTF_00854261;
80% Identity: -