Basic Information

Insect: Lamprigera yunnana
Gene Symbol: -
Assembly: GCA_013368075.1
Location: JABVZV010001931.1:225734-255710[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00053 0.0074 16.8 2.4 1 23 385 407 385 407 0.97

2 18 0.00016 0.0023 18.4 1.8 1 20 413 432 413 435 0.94

3 18 9.1e-05 0.0013 19.2 0.8 1 23 441 463 441 463 0.98

4 18 0.00032 0.0045 17.5 4.1 1 21 469 489 469 491 0.94

5 18 0.0008 0.011 16.2 4.7 1 23 497 519 497 519 0.99

6 18 0.00015 0.0021 18.5 5.3 1 23 525 547 525 547 0.97

7 18 2.6e-05 0.00036 20.9 7.2 1 23 553 575 553 575 0.97

8 18 5.9e-07 8.3e-06 26.1 2.7 1 23 581 603 581 603 0.98

9 18 0.00043 0.0062 17.1 6.7 1 23 609 631 609 631 0.97

10 18 0.00016 0.0023 18.4 4.5 1 23 637 659 637 659 0.97

11 18 2.8e-06 4e-05 24.0 2.8 1 23 665 687 665 687 0.98

12 18 0.0002 0.0029 18.1 8.1 1 23 693 715 693 715 0.98

13 18 3.2e-05 0.00046 20.6 8.9 1 23 721 743 721 743 0.98

14 18 0.0001 0.0014 19.0 7.7 1 23 749 771 749 771 0.98

15 18 0.00031 0.0045 17.5 7.0 1 23 777 799 777 799 0.96

16 18 0.00031 0.0044 17.5 0.8 1 23 805 827 805 827 0.98

17 18 0.15 2.2 9.0 5.1 1 23 837 859 837 859 0.98

18 18 4e-06 5.6e-05 23.5 0.8 1 23 865 887 865 887 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00053	0.0074	16.8	2.4	1	23	385	407	385	407	0.97
2	18	0.00016	0.0023	18.4	1.8	1	20	413	432	413	435	0.94
3	18	9.1e-05	0.0013	19.2	0.8	1	23	441	463	441	463	0.98
4	18	0.00032	0.0045	17.5	4.1	1	21	469	489	469	491	0.94
5	18	0.0008	0.011	16.2	4.7	1	23	497	519	497	519	0.99
6	18	0.00015	0.0021	18.5	5.3	1	23	525	547	525	547	0.97
7	18	2.6e-05	0.00036	20.9	7.2	1	23	553	575	553	575	0.97
8	18	5.9e-07	8.3e-06	26.1	2.7	1	23	581	603	581	603	0.98
9	18	0.00043	0.0062	17.1	6.7	1	23	609	631	609	631	0.97
10	18	0.00016	0.0023	18.4	4.5	1	23	637	659	637	659	0.97
11	18	2.8e-06	4e-05	24.0	2.8	1	23	665	687	665	687	0.98
12	18	0.0002	0.0029	18.1	8.1	1	23	693	715	693	715	0.98
13	18	3.2e-05	0.00046	20.6	8.9	1	23	721	743	721	743	0.98
14	18	0.0001	0.0014	19.0	7.7	1	23	749	771	749	771	0.98
15	18	0.00031	0.0045	17.5	7.0	1	23	777	799	777	799	0.96
16	18	0.00031	0.0044	17.5	0.8	1	23	805	827	805	827	0.98
17	18	0.15	2.2	9.0	5.1	1	23	837	859	837	859	0.98
18	18	4e-06	5.6e-05	23.5	0.8	1	23	865	887	865	887	0.96

Sequence Information

Coding Sequence: ATGCCTACTGATCTACGTGTTAACACTACAGCTCTGAATGCAGTTGCATTAAGCAGCGTTGCAAAATATTGGGTTCTAACGAACTTGTTGCCGGGTCCAATACCTCAAGTGTCCGTCTATGGCTTACCCACCTCGGGTCGTAATGATAATCAAAGTAAATTAACCCAGGAAGCAATGTTGGGTCAACACAGTGGACTTCTGCAAGCAGATCCATTACTTCTACAACAGCACACTCAAATTCCAGTTGGTATATCTACATCTCAAGGCATCGCAAGCTTGGCAATTCAATCAAATGcaatgcatttagaaaattcacaAAATCACACACAGTCTTTAACCAACCATCAGCACAACGAAGGCCAAGTTATAGTCAATCCATCCCAAACTCAACTGTCCCATGCGCAATTGCAAAGTGCACAAACACATACTCAGCAATCACAACAAAACCTTGTGCAAGTACAAGTTCAAGATAATTTAGTTTCTGTGATTGAAGATAGTAAAGACCACAAAGATTTAATTGCATCCCAGTTGGCTCAAGCtcaattacatttaaatgaaaatcaacAGTTGAATCAGCAAACATTAACGGTGCAACAATTGCAGCATTTACAAGTACAACAAGTGTTGGATAATGTGGTACGTATGGAGAGCGGAGTTGAAAATGGACAAAATCATTCAGAACAAGATTCACTGGCTGGACCTGATGGTTTACCCATTATCAAAGATGAAAAAGGTTTGCACAATTGTACAAAGTTACTTGGTGCTCAATTCGGTTTGCAAGATACAAAAACAAATCTAATGGATATACGAACAGTAGATGGGAGTATAGTTAAGATAGCAGCAGGCATTCAGGACCAAGATCTAGCAAAAACATTAGGTGTTGAAATGGTGCAGAACATGTACAAAGTGAATGTAGATGATATTAACCAATTACTTGCATATCATGAAGTGTTTGGAAAATTACAGGGTGAAATTACGACTGGACAAACAAATGTGTCTGCAAATAATAGTAATTTGAATTTACAACAAACTGCAAATGCGATTTCTAACAACATTCAAATTGTTACTCCGAAAACTATAAATGAAAACGAACAAGAAGCTTCGACAAGTTCAATTGCAGCAGATAGTCCTCCCGCGATTATAGGTGGAACTCATGTATGTGATTTGTGTGGGAAAATGTTTCAATTTCGTTATCAGTTGATTGTACATAGGAGATACCACACTGAAAGAAAACCCTTTACCTGTCAAGTGTGCGGGAAGGCATTTACAAATGCACAAGAACTCACAAGACACGGCAAGTGTCACTTGGGTGGAAGCATGTTTACATGTGCTGTATGTTTTCATGTGTTTGCAAATGCAGCATCTTTAGAACGGCACATGAAAAGACATTCTACAGATAAACCTTATGATTGTACTATTTGTGGAAAAACTTTTGCTAGAAAAGAACATTTAGATAATCACACTCGTTGTCACACAGGAGAAACTCCTTATAGATGTCAGTTTTGTGCAAAAACGTTTACTCGGAAGGAGCATATGGTTAACCATGTCCGGAAACATACAGgtGAAACTCCGCATAGGTGTGAAATCtgtaaaaaatcatttacaagAAAAGAGCATTTTATGAATCATGTTATGTGGCATACGGGTGAAACTCCTCATCATTGCACAATTTGTGGGAAAAAGTATACTAGGAAAGAGCACCTGGCAAATCATATGAGGTCTCATACTAATGATACACCATTTCGTTGTGAAATTTGTGGAAAATCTTTTACTAGAAAAGAACATTTTACTAATCACATAATGTGGCACACTGGTGAGACACCGCATAGATGTGATTTTTGTTCTAAAACATTTACTCGAAAAGAACATCTATTAAATCATGTACGTCAACATACAGGAGAATCACCACATCGTTGTGCTTATTGTGCAAAATCGTTTACACGCAAAGAACACTTAATTAATCATGTAAGACAACATACAGGAGAGACGCCATTTAGATGTAGTTATTGTCCAAAAGCTTTCACAAGAAAGGATCATTTAGTAAACCATGTGAGACAACACACCGGAGAATCTCCACATAAATGtacattttgtacaaaatccttTACAAGAAAGGAGCACTTAACAAATCACGTCCGGCAGCATACAGGTGAATCTCCGCATCGTTGCCATTATTGTTCCAAATCTTTCACAAGAAAGGAACACTTAACGAATCATGTACGTATTCATACAGGTGAATCCCCACATCGTTGTGAATTCTGTCAAAAAACATTTACCAGGAAAGAGCACTTAACTAACCATTTACGTCAACACACTGGTGAAACGCCTCATTGTTGTGAAGTTTGTTTTAAACCTTTCACTAGAAAGGAACATCTTGTAAACCACATGAGGTCGCATACTGGGGAAAGACCATTCTCCTGTACTGAATGTGGAAAATCATTTCCCTTAAAAGgcaatttattatttcatcaaCGTTCTCATAATAAGGGTGCTGATGCTGATAGACCATTTAGATGTGATCTTTGTGATAAAGATTTTATGTGTAAAGGCCATTTAGTTTCACACAGACGATCGCATACTGGCGAAAGACCACACGCTTGTCCCGATTGTGGTAAAACATTTGTGGAAAAAGGTAATATGTTGAGGCATTTACGTAGACATACTTTGGAAAATGGACAAGCTCAGGCCACTATAAATCAAGTTGCTACTAATTCTGTTGTAACAAACCAAACACAACCACAATCAAATTCTCTTCCTGTACAAACGTCTTCTACCACTACTACTATACAAATACCACAGGTTAGTCAGAGTTTGGCAAGTACTGTATCAACAGCTAATATTGTAAGTACCGGGAATATTCTACAACAAGCACACTTGCCAATACATCAACAAACTACTCAACCCTTGGTTCCTGCAGCTAGTTCAATTGCAGATTTAGAAGGTTCTACTGCTGAGGATGTGGTGATTCCCGATCATGAAACCAATTCCAACCATCAGCCGGATCAACCCTCAACTTcagcaatacaaaaattgaaatggaaaaagcaaaatgacaaaatatcGCAAATAGAGTCCTCTGACACGTCTGATAACGATCAGGTCAATACCATAGAATATGCAGAGAGTGATGACAGTCCCTGGGACCCGTCTATGTCTGATGACAATTTAAACACAGAAGCTGAATGTTCAACAGTAGAAAAGCTTCCAACCAAGAAAACTGTTGGGACTTACGTCGctgtaatttacaataaaaaatattatcctgGTCAAATAACGAAAATTGAGGACAAAGGAGCAATTGTGAATGTCATGACTCAATATGGTAAACAATGGAAATGGCCATCTCAAAAAgatgaaattttctacaatgaagaagaaattgtcATGACTCTGAAAACACCAACGCGTCGTGGTCACCGGGAGCTTTTTGATATTCCTGAATTAACTAATATATAG
Protein Sequence: MPTDLRVNTTALNAVALSSVAKYWVLTNLLPGPIPQVSVYGLPTSGRNDNQSKLTQEAMLGQHSGLLQADPLLLQQHTQIPVGISTSQGIASLAIQSNAMHLENSQNHTQSLTNHQHNEGQVIVNPSQTQLSHAQLQSAQTHTQQSQQNLVQVQVQDNLVSVIEDSKDHKDLIASQLAQAQLHLNENQQLNQQTLTVQQLQHLQVQQVLDNVVRMESGVENGQNHSEQDSLAGPDGLPIIKDEKGLHNCTKLLGAQFGLQDTKTNLMDIRTVDGSIVKIAAGIQDQDLAKTLGVEMVQNMYKVNVDDINQLLAYHEVFGKLQGEITTGQTNVSANNSNLNLQQTANAISNNIQIVTPKTINENEQEASTSSIAADSPPAIIGGTHVCDLCGKMFQFRYQLIVHRRYHTERKPFTCQVCGKAFTNAQELTRHGKCHLGGSMFTCAVCFHVFANAASLERHMKRHSTDKPYDCTICGKTFARKEHLDNHTRCHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCTICGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCAYCAKSFTRKEHLINHVRQHTGETPFRCSYCPKAFTRKDHLVNHVRQHTGESPHKCTFCTKSFTRKEHLTNHVRQHTGESPHRCHYCSKSFTRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLRQHTGETPHCCEVCFKPFTRKEHLVNHMRSHTGERPFSCTECGKSFPLKGNLLFHQRSHNKGADADRPFRCDLCDKDFMCKGHLVSHRRSHTGERPHACPDCGKTFVEKGNMLRHLRRHTLENGQAQATINQVATNSVVTNQTQPQSNSLPVQTSSTTTTIQIPQVSQSLASTVSTANIVSTGNILQQAHLPIHQQTTQPLVPAASSIADLEGSTAEDVVIPDHETNSNHQPDQPSTSAIQKLKWKKQNDKISQIESSDTSDNDQVNTIEYAESDDSPWDPSMSDDNLNTEAECSTVEKLPTKKTVGTYVAVIYNKKYYPGQITKIEDKGAIVNVMTQYGKQWKWPSQKDEIFYNEEEIVMTLKTPTRRGHRELFDIPELTNI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00003178;
90% Identity: iTF_00003178;
80% Identity: -