Basic Information

Insect: Abrostola triplasia
Gene Symbol: -
Assembly: GCA_946251925.1
Location: CAMIUJ010000005.1:6957240-6963425[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 4.4 2.6e+02 2.5 0.2 1 23 86 109 86 109 0.89

2 20 0.73 43 5.0 0.2 3 23 114 134 112 134 0.95

3 20 0.0037 0.22 12.2 0.1 2 23 138 160 137 160 0.95

4 20 0.026 1.5 9.6 0.5 3 23 392 413 390 413 0.95

5 20 0.079 4.7 8.0 0.3 1 20 421 440 421 442 0.94

6 20 0.0055 0.32 11.7 0.6 2 23 452 473 451 473 0.94

7 20 0.0042 0.25 12.0 2.4 1 23 521 544 521 544 0.94

8 20 0.9 53 4.7 0.1 2 23 556 578 555 578 0.96

9 20 7.6 4.5e+02 1.8 1.2 8 23 594 610 585 610 0.85

10 20 0.28 17 6.3 0.3 3 23 623 644 622 644 0.86

11 20 4.1 2.4e+02 2.6 1.9 1 23 649 672 649 672 0.93

12 20 3.6e-05 0.0021 18.5 1.9 1 23 678 700 678 700 0.96

13 20 3e-05 0.0018 18.8 1.3 1 23 707 729 707 729 0.98

14 20 0.00011 0.0067 17.0 0.9 3 23 736 756 735 756 0.99

15 20 0.00015 0.0088 16.6 0.8 1 23 762 784 762 784 0.98

16 20 4.9e-07 2.9e-05 24.4 1.9 1 23 790 812 790 812 0.98

17 20 0.00074 0.044 14.4 1.8 2 23 819 840 819 840 0.97

18 20 0.00023 0.014 16.0 0.5 2 23 848 870 847 870 0.97

19 20 0.00016 0.0095 16.5 0.3 1 23 875 897 875 897 0.98

20 20 0.0023 0.14 12.8 1.9 2 23 904 926 903 926 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	4.4	2.6e+02	2.5	0.2	1	23	86	109	86	109	0.89
2	20	0.73	43	5.0	0.2	3	23	114	134	112	134	0.95
3	20	0.0037	0.22	12.2	0.1	2	23	138	160	137	160	0.95
4	20	0.026	1.5	9.6	0.5	3	23	392	413	390	413	0.95
5	20	0.079	4.7	8.0	0.3	1	20	421	440	421	442	0.94
6	20	0.0055	0.32	11.7	0.6	2	23	452	473	451	473	0.94
7	20	0.0042	0.25	12.0	2.4	1	23	521	544	521	544	0.94
8	20	0.9	53	4.7	0.1	2	23	556	578	555	578	0.96
9	20	7.6	4.5e+02	1.8	1.2	8	23	594	610	585	610	0.85
10	20	0.28	17	6.3	0.3	3	23	623	644	622	644	0.86
11	20	4.1	2.4e+02	2.6	1.9	1	23	649	672	649	672	0.93
12	20	3.6e-05	0.0021	18.5	1.9	1	23	678	700	678	700	0.96
13	20	3e-05	0.0018	18.8	1.3	1	23	707	729	707	729	0.98
14	20	0.00011	0.0067	17.0	0.9	3	23	736	756	735	756	0.99
15	20	0.00015	0.0088	16.6	0.8	1	23	762	784	762	784	0.98
16	20	4.9e-07	2.9e-05	24.4	1.9	1	23	790	812	790	812	0.98
17	20	0.00074	0.044	14.4	1.8	2	23	819	840	819	840	0.97
18	20	0.00023	0.014	16.0	0.5	2	23	848	870	847	870	0.97
19	20	0.00016	0.0095	16.5	0.3	1	23	875	897	875	897	0.98
20	20	0.0023	0.14	12.8	1.9	2	23	904	926	903	926	0.96

Sequence Information

Coding Sequence: ATGACTTCGGATGAATCGGACGACGAACCACTATCTGTTATAGCGGCAAACAAGAAAATAAATCCAGATGAAGAGAATGAATTGTTCGACAAAAATTCTGAAGCTCCAAAGAAGAAGAAAAAGAAATTGCCGCCTCCTAAGCGGCTTTCGATCACTATAAAGTTTCAGCGCAGTAAAGCTGGGCAGCAACAACCTGTAATCGAACGCCCTGCAGACGTGTGGCTATATTTAAAGGATCTGAACCCTTCAGGACCATACAACTGTCTCCTATGTACCGAATGGTTCATAAACAGATCAAAAATGATTGTTCACTATGTCTTAAACCATAAGAAAGACTTTTGTGGCATATGCAGGTATTTTGTACCAGACCGAGAATCTTGGTGGAAACATGTAAAGTTCCACAACCCGTGGCCTTGCTCTCAATGTGTTGAGAACTTTGATACTGAAGAGGATTTACGCACCCATCTTAAAAGTGTTCACAACCTCGTACATTGTAGACTCTGCCATTTTCGTGTTCCTGATGGTGATGCATATCACACTCATTTATTCAAAAAACACAATGTTACCAATGTATCAAGCAAGGATGAGGAAAACTTATGGGAATTAGAATATGATGGAACATCAAACTTTTTATGCTTACTTTGTTCTAAGTCTAATAACTCAACACGCACATTCTTTAATCATTACATGGGCCTTCACCATTTTACACTCAAATGTTTCACTGCTTTGGTCGCAGGAAGAGACCCTCCTTTCACAGTGTCTGGAGCTGACCTTAGACCGGAATTTGTTGAGGAACAACTAAAGAATCATGCAAGATATGGCTATGTTGATTCTGACTTGAAACCTCCAGATTGTGGAATAGAACCTTGTGATACAAAAGACTTGCTCAAAGTTCTTATACCAGAAATTAAACAGGAAATATTCACTGCTGAGGAAAGTAAGAATGATGATCAAGTTATGCCTCCACCAAGAGATGATGATGATGACGAAGTTTATAAAAACTATAATGGTGATGATGACTTTGATGTGACATTAATGGAAGTGTTGGTTGTCCAGAAATGTTATGCTGATTACATAGGTGACATACTATGTGATATAAATTCTAGTTCAGTTTATGAATACTCTGATATTGATTATGAAAAGGCTACAATAGATCTAACAACAGATATAGATTGCAGTCTATGCAAGGTCCGCTACAGTAGTCTATCAGGATTTATATCTCATATGTTCAAGATGCATTGCATAAAGGCCGCGCCATTGTTTTCATGTAGAGTGTGTGCAACAACTTTCGACACTCAAAATGAGCTAGACAATCACACCACTAATGAGTTGGGGGACTTTGAAGACCTCTGGATATGTCAGTTTTGTGACAAGGAGTTTGATGACAGAGAGTCCACCAGGCGACATTTAACTGAACACTGGGATCTTATAGAATATGATAATTGTTTTAGTCCACATTTAGGTTTTAAATGCAGTTTCTGTCCAACTTTATTCTGGCATGAGACTGATAGAGAGACCCACCAGGTCAGGGCTCACTACTTCAACCACAAGGAGCTATTTTACAGATGTGAGACTTGCACAGAAGTGTTCAGTGATAAGATCTGGTTCATCCACCACTACACCCAAAAGCATAGTACTCCTGACAAAGCCCCGCTGTACCTGCTCAAGTGCTCACTCTGTTCCCTGGTGCTGCCTGATGTGGACAAGATGAGGGCTCACTTCAACACTGAACATCCTGAAGCTAGGAAGGTGTACTGCTCCTTAGATTCCTGCCAGTACAAGCCTCTGAGTCATAGAAAGTCCTTTAAACTACATGTTCGGACCATCCACACGTCGCGCGTCCCCCGTCCGGAGCGCGCGGTGGACTGCTCGGTGTGCGGGCGCGAGTTCGTCAGCTCGCGCGCGTGCGGGGCCCACATGGCGCAGGCGCACGGGCCCGGGAAGTTCAAGTGCAAGCTGTGTAGGGAGGTGCTGCATACTATGGACGAGAGGAAACTCCACTACCTGATCAGCCACCCCGGGCAGCATCCATTCGAGTGCAACGAGTGCGGCAAGTCGTTCCAGTACAAGTCCTCGCTGTACATGCATAAGCAGGACCACCTGCCCAACAAACAGAACTATACATGTACATACTGTGGGAAGATATTTATGAAGCGCGACTCGTTCCGCGAGCACGTGCAGATCCACGAGGGCCCGCAGCACGGCTGCTCGTACTGCCCCATGCGCTTCGTGCAGCGCTCCAACATGCTGCGCCACGAGCGGCGCCACACGGGCGAGCGGCCCTACGCCTGCCCGCACTGCCCGCGCAGCTTCGCCGACAAGGGCGCCTGCACCGCGCACGCCAGGACTCATTCAAAGGACACGTCTTATGCCTGCATGTATTGCGGCAAGACTTTTGTTCAGAAGTCCAAGTTGACGTACCACATCAGGAAACACACGGGAGAGAATCTGGAGACGTGCGGCGTGTGCTCCAAGCTCTTCACAAGCGCGTGCTCGTTGCGCGAACACATGAAGATACACGAACGGAAGACGGAGCTAGTCAAGTGTCCACTATGCGACCGTAAGTACGCGGACGAGCGCTACATGCTGCGGCACCTGCGCACGACGCACACGAACGCGCGCTACCCGTGCCCCATCTGTAAGAAGCTGCTCACCAGCGCCTCCGGCCTCAGGCACCACGTCATCACGCACAGCTCGCTCAAGACGCTCAGGTGTAAAATGTGTCCAAAAGCATACTCAGTAAAGAGAACGATGATCAAACACTTCAGACGCCGACATGGCTTCAAAGGCACTGAGCCTAACATCAAAGAGTTCTTCACTAGACTGGACCCAAGAGAATGCAACCTAGCCCTAGACGAAGAAACCATGACCACTATATTCGGACCCGCGAAGACTCGTGTCGACGAACTGCTAGTAGGAGACTTCGTTACTTTAGCCAACTTGGAACAGCAGAAGAGATTAAACGCGGAAAGAGAAGCGTGCGACGCTCTAGAAACTGAACAGAATAAGACACAGACAGAAAATGAAGTGTCGAGGGAGACTGAGAAAGATACTGCTGAAGGGGGCGACAAGAAGGTTATAATTAAAATAGAGCCCGCGGAGAGCCCGGATGAGCACGGTGACGCGGAGTTAGAGCCGACAGACTTTGTTAGCGTTAAAATTGAGCCGATGGATGATGATGACTAG
Protein Sequence: MTSDESDDEPLSVIAANKKINPDEENELFDKNSEAPKKKKKKLPPPKRLSITIKFQRSKAGQQQPVIERPADVWLYLKDLNPSGPYNCLLCTEWFINRSKMIVHYVLNHKKDFCGICRYFVPDRESWWKHVKFHNPWPCSQCVENFDTEEDLRTHLKSVHNLVHCRLCHFRVPDGDAYHTHLFKKHNVTNVSSKDEENLWELEYDGTSNFLCLLCSKSNNSTRTFFNHYMGLHHFTLKCFTALVAGRDPPFTVSGADLRPEFVEEQLKNHARYGYVDSDLKPPDCGIEPCDTKDLLKVLIPEIKQEIFTAEESKNDDQVMPPPRDDDDDEVYKNYNGDDDFDVTLMEVLVVQKCYADYIGDILCDINSSSVYEYSDIDYEKATIDLTTDIDCSLCKVRYSSLSGFISHMFKMHCIKAAPLFSCRVCATTFDTQNELDNHTTNELGDFEDLWICQFCDKEFDDRESTRRHLTEHWDLIEYDNCFSPHLGFKCSFCPTLFWHETDRETHQVRAHYFNHKELFYRCETCTEVFSDKIWFIHHYTQKHSTPDKAPLYLLKCSLCSLVLPDVDKMRAHFNTEHPEARKVYCSLDSCQYKPLSHRKSFKLHVRTIHTSRVPRPERAVDCSVCGREFVSSRACGAHMAQAHGPGKFKCKLCREVLHTMDERKLHYLISHPGQHPFECNECGKSFQYKSSLYMHKQDHLPNKQNYTCTYCGKIFMKRDSFREHVQIHEGPQHGCSYCPMRFVQRSNMLRHERRHTGERPYACPHCPRSFADKGACTAHARTHSKDTSYACMYCGKTFVQKSKLTYHIRKHTGENLETCGVCSKLFTSACSLREHMKIHERKTELVKCPLCDRKYADERYMLRHLRTTHTNARYPCPICKKLLTSASGLRHHVITHSSLKTLRCKMCPKAYSVKRTMIKHFRRRHGFKGTEPNIKEFFTRLDPRECNLALDEETMTTIFGPAKTRVDELLVGDFVTLANLEQQKRLNAEREACDALETEQNKTQTENEVSRETEKDTAEGGDKKVIIKIEPAESPDEHGDAELEPTDFVSVKIEPMDDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00000550; iTF_01221840; iTF_00186513; iTF_00185553; iTF_00327292;
90% Identity: iTF_00000550;
80% Identity: -