Basic Information

Insect: Autographa gamma
Gene Symbol: -
Assembly: GCA_905146925.1
Location: LR989861.1:2572305-2579575[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1 91 4.4 0.1 3 23 112 132 110 132 0.95

2 18 0.0024 0.22 12.6 0.1 2 23 136 158 135 158 0.96

3 18 0.094 8.5 7.6 1.6 3 23 390 411 388 411 0.94

4 18 0.0044 0.4 11.8 0.1 1 20 419 438 419 440 0.94

5 18 0.0095 0.86 10.7 0.3 1 23 449 471 449 471 0.95

6 18 0.027 2.5 9.3 0.8 1 23 519 542 519 542 0.96

7 18 4.5 4.1e+02 2.3 1.5 8 23 592 608 583 608 0.85

8 18 0.036 3.3 8.9 0.3 2 23 619 641 618 641 0.86

9 18 3.7 3.3e+02 2.6 1.5 1 23 646 669 646 669 0.92

10 18 3.1e-05 0.0028 18.5 1.9 1 23 675 697 675 697 0.96

11 18 2.6e-05 0.0023 18.8 1.3 1 23 704 726 704 726 0.98

12 18 7.6e-05 0.0069 17.3 2.3 1 23 731 753 731 753 0.96

13 18 0.00022 0.02 15.9 2.2 1 23 759 781 759 781 0.98

14 18 3.6e-07 3.3e-05 24.6 1.7 1 23 787 809 787 809 0.98

15 18 0.00064 0.058 14.4 1.8 2 23 816 837 816 837 0.97

16 18 0.0007 0.064 14.3 0.4 2 23 845 867 844 867 0.97

17 18 0.00017 0.016 16.2 0.3 1 23 872 894 872 894 0.98

18 18 0.002 0.18 12.8 1.9 2 23 901 923 900 923 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1	91	4.4	0.1	3	23	112	132	110	132	0.95
2	18	0.0024	0.22	12.6	0.1	2	23	136	158	135	158	0.96
3	18	0.094	8.5	7.6	1.6	3	23	390	411	388	411	0.94
4	18	0.0044	0.4	11.8	0.1	1	20	419	438	419	440	0.94
5	18	0.0095	0.86	10.7	0.3	1	23	449	471	449	471	0.95
6	18	0.027	2.5	9.3	0.8	1	23	519	542	519	542	0.96
7	18	4.5	4.1e+02	2.3	1.5	8	23	592	608	583	608	0.85
8	18	0.036	3.3	8.9	0.3	2	23	619	641	618	641	0.86
9	18	3.7	3.3e+02	2.6	1.5	1	23	646	669	646	669	0.92
10	18	3.1e-05	0.0028	18.5	1.9	1	23	675	697	675	697	0.96
11	18	2.6e-05	0.0023	18.8	1.3	1	23	704	726	704	726	0.98
12	18	7.6e-05	0.0069	17.3	2.3	1	23	731	753	731	753	0.96
13	18	0.00022	0.02	15.9	2.2	1	23	759	781	759	781	0.98
14	18	3.6e-07	3.3e-05	24.6	1.7	1	23	787	809	787	809	0.98
15	18	0.00064	0.058	14.4	1.8	2	23	816	837	816	837	0.97
16	18	0.0007	0.064	14.3	0.4	2	23	845	867	844	867	0.97
17	18	0.00017	0.016	16.2	0.3	1	23	872	894	872	894	0.98
18	18	0.002	0.18	12.8	1.9	2	23	901	923	900	923	0.96

Sequence Information

Coding Sequence: ATGTCTTCGGACGATTCCGACGATGAACCGCTATCCGTTATAGCGGCGAATAAGAAAGTGAATCCTGATTTAGAAATAATACCATCAGATTGTTCAAAGTCTCCAAAAAAGAAGAAAAAGAAAGTACCGCCGCCGAAGCGCCTTTCTATCACTATAAAATTGCAACGCAGTAAAGGCCCACAGCAGCCTACGATTGAACGTCCTTCCGATGTTTGGCTGTATTTAAAAGACCTGAATCCATCAGGTCCATACAACTGCCTACTCTGCACAGAATGGTTCATAAACAGATCAAAAATTATTATTCACTATGTCCTGAATCATAAGAAAGATTTCTGTGGCATTTGCAGGTATTTTGTACCTGACAGAGAGGCTTGGTGGAAACATGTAAAGTTCCACACTCCTTGGCCTTGCTCCCAATGTGTTGAGAACTTTGAAACTGAAGTAGAGTTACGCAACCACCTCAGAAGTGTTCACAACCTGGTACATTGCAGACTCTGCCATTTCCGTGTACCGAATGGTGATCCATACCACACCCATTTATTCCAAAAGCATAATGTCAGTAATGTGTCAAATAAGGATGAGGAGAATTTATGGGAGTTGGAGTATGATGGGACTTGTAATTTTCTTTGTTTACTGTGTTCTAAGTCAAATAACTCTACTAGAACTTTCTTCAACCATTACATGGGCTTTCACCACTTTACCCTGAAGTGTTTTACTGCCCTGCTGGCCGGCAGAGACCCTCCATTCACAGTGAGTGGTGCAGACCTGAGGGCTGAGTTTGTTGAAGAACAATTAAAGAACCATGCAAGATATGGATATGTTGATTCTGACTTGAAACCACCAGAACTTGGTGGAGAAGCTTGTGATACAAAAGACTTGCTGAAGGTTCTTATACCAGAAATAAAACAGGAAATGTTTGCTGCTGATGAAAGTAAGAATGATGGAGTTGTTGCAATACAGCCCAAAGATGACGATGATGATGATGTTTATAAAAACTATAATGGGGATGATGACTTTGATGTGACATTGACAGAGATGCTGGTTGTTCAAAAATGTTACAAAGACTATATAGGTGATATTCTGTGTGACATAAACTCTAACTGTGTTTATGAATACTCTGATATAGATTATGAAAAGGCTTTATTGGATCCTACAGTAGATATCAATTGCAGTTTATGCAAAGTCCACTATAGTAGTTTATCAGGGTTTGTAACTCACATGTTTAAAATGCACTGTGTAAAGACTGCGCCTTTGTTTTCATGTAGAGTATGTGCAACAACATTTGATACTCAGAATGAGTTAGAGAACCACATATCTAATGAGTTGGGAGATTTTGAGGATCTCTTTATTTGTCAGTTTTGTGATGAAGAGTTTGCTGACAGAGAGGCGACCAGGCGGCATCTGACGGACCACTGGGATCTTATAGAATATGACAATTGTTTTAGTCCTCACTTAGGCTTTAAATGCAGCTTTTGTCCAACTCTGTTTTGGCATGAAACTGATAGAGAAACACATCAAGTTCGAGCTCATTTCTTTAACCATAAAGAGTTTTTCTTTAAATGTGAATTGTGTGAAGATATATTTAGTGATAAGGTCTGGTTCATCCACCACTACTTAGTGACACACAGTACAGCCGGCAAGGTGCCTCTCTACCTCCTCAAGTGTTCCATCTGCTGCCTGGTGCTCTCTGACATTGAGAAGATGAGGGAGCACTTCAACAAGGAGCATCCTGAGGCTAGGAAGGTTTACTGTTCTCTAGACTCCTGTAAATACAAGCCCTTGAGCCACAAGAAGTCTTTTAAGCTGCATGTTCGGACAATTCACACGGCCCGCCCGCGTCCGGAGCGCGCTGTAGAATGCACGGTGTGCGGGCGCGAGTTCACGAGTTCCCGCGCGTGCGGCGCGCACATGGCGCAGGCGCACGGCCCCGGCAAGTTCAAGTGCAAGCTCTGCAGGGAGGTGCTGCATACTATCGATGAGAGGAAACTGCACTACCTGATCAGCCACCCCGGCCAGCACCCGTTCGAGTGCAACGAGTGCGGCAAGTCCTTCCAATACAAGTCGTCCCTCTACATGCACAAACAGGACCATCTGCCCAACAAACAGAACTACACGTGTACTTACTGCGGGAAGATATTTATGAAGCGCGACTCGTTCCGTGAGCACGTGCAGATCCACGAGGGTCCGCGTCACGCGTGCTCGTACTGCCCCATGCGGTTCGTGCAGCGCTCCAACATGCTGCGTCACGAGCGCCGCCACACGGGCGAGCGCCCCTACGCCTGCCCGCACTGTCCGCGCAGCTTCGCCGATAAGGGCGCCTGCACCTCTCACACTAGAACTCATTCCAAGGACACATCATACGCGTGCTTGTACTGCGGCAAGACATTCGTACAGAAATCCAAGTTGACGTACCACATCAGGAAACATACAGGAGAGAACCTGGAGACTTGCGGAGTATGTTCCAAGCTGTTCACAAGCGCGTGCTCGTTGCGCGAACACATGAAGATACACGAACGTAAGAAGGAGCTCGTCAAGTGTCCTCTATGTGAACGTAAATACGCGGACGAGCGCTACATGCTCCGTCACTTGCGCACGACGCACACGCACGCGCGCTTCCCATGCCCGATCTGTAAGAAGTTGCTGACGAGCGCGTCGGGGCTCAAGCATCATGTGATCACGCACAGCTCGCTCAAGACTCTTAGGTGCAAAATGTGTCCAAAAGCATACTCAGTGAAAAGAACAATGATCAAACACTTCCGTCGCCGGCACGGCTTCAAGGGTACAGAACCTAACATAAAGGAATTCTTCACGCGACTAGACCCAAGAGAATGCAACCTAGACCTCGACGAGGAAACCATGACAAGCATCTTTGGACCCGTCAAAAATAATTCAGACGAAATATTAGTAGGAGATTTCGTTACCTTAACCAATATCGAAGAGAAACAAGACTTAGAAGCAGAAAGAGAAAAGAGTGAGACTCCTGAAGATGGGAAGTTACAAACAGATGACGACAAGTCTAGGGACAGTGAGGTGATGATTGCCAATGAAGATAATAAGATTGTAATTAAAGTGGAACCGGCAGAACCGCCTGAACAACTTGACTTGGAGCCAACAGACTTCGTTAGCGTTAAAATAGAATCTATGGATGATGAGAACTAG
Protein Sequence: MSSDDSDDEPLSVIAANKKVNPDLEIIPSDCSKSPKKKKKKVPPPKRLSITIKLQRSKGPQQPTIERPSDVWLYLKDLNPSGPYNCLLCTEWFINRSKIIIHYVLNHKKDFCGICRYFVPDREAWWKHVKFHTPWPCSQCVENFETEVELRNHLRSVHNLVHCRLCHFRVPNGDPYHTHLFQKHNVSNVSNKDEENLWELEYDGTCNFLCLLCSKSNNSTRTFFNHYMGFHHFTLKCFTALLAGRDPPFTVSGADLRAEFVEEQLKNHARYGYVDSDLKPPELGGEACDTKDLLKVLIPEIKQEMFAADESKNDGVVAIQPKDDDDDDVYKNYNGDDDFDVTLTEMLVVQKCYKDYIGDILCDINSNCVYEYSDIDYEKALLDPTVDINCSLCKVHYSSLSGFVTHMFKMHCVKTAPLFSCRVCATTFDTQNELENHISNELGDFEDLFICQFCDEEFADREATRRHLTDHWDLIEYDNCFSPHLGFKCSFCPTLFWHETDRETHQVRAHFFNHKEFFFKCELCEDIFSDKVWFIHHYLVTHSTAGKVPLYLLKCSICCLVLSDIEKMREHFNKEHPEARKVYCSLDSCKYKPLSHKKSFKLHVRTIHTARPRPERAVECTVCGREFTSSRACGAHMAQAHGPGKFKCKLCREVLHTIDERKLHYLISHPGQHPFECNECGKSFQYKSSLYMHKQDHLPNKQNYTCTYCGKIFMKRDSFREHVQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYACPHCPRSFADKGACTSHTRTHSKDTSYACLYCGKTFVQKSKLTYHIRKHTGENLETCGVCSKLFTSACSLREHMKIHERKKELVKCPLCERKYADERYMLRHLRTTHTHARFPCPICKKLLTSASGLKHHVITHSSLKTLRCKMCPKAYSVKRTMIKHFRRRHGFKGTEPNIKEFFTRLDPRECNLDLDEETMTSIFGPVKNNSDEILVGDFVTLTNIEEKQDLEAEREKSETPEDGKLQTDDDKSRDSEVMIANEDNKIVIKVEPAEPPEQLDLEPTDFVSVKIESMDDEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00001385;
90% Identity: iTF_00186513;
80% Identity: -