Zfil012846.1
Basic Information
- Insect
- Zygaena filipendulae
- Gene Symbol
- LRRFIP2
- Assembly
- GCA_907165275.1
- Location
- OU015652.1:1455604-1467765[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.7e-76 1.8e-71 241.5 25.2 1 297 135 418 135 420 0.88 2 2 0.98 2.6e+04 -5.3 15.7 1 46 417 462 417 492 0.69
Sequence Information
- Coding Sequence
- ATGGGTGACGGATCTAAAATGGAAACGCCCGATAATAGTGACGAGGAGAGCGGTGAAGCTTTCACTGATGGTGATTTTGGTGATTCCGACGAAGAAATGGTCCTGAATAGCGGTGAGAGTTACAAAAGTGCGATTTCAGTTAATGAAACAGTGAATATGGACGTTAAGACGGTCGTCGCTCAAACTGGAACTGATGGAAAAGATAATAATGGTTTAGATAACCGTACTAATGGTTCCATAGATCCGACCAAGGTTAATGGTTCTGGTAATGACATCAGAGTGTGTAACGAGGTGGATGACAGCTGTGTTGGTACCGAAAATGACATTTCGGATGTGAGAAGAGAATCTTATGGCGAACAACATCCTTCTATTGTCGGCATTCTGGGCGGCCAACAGAACCATGCGGAGCAGCGGCTGGCGGCGCGGCGGGCGGCGCGCGCGGAGGCCCGCGAGATCCGCATGCGCGAGCTGGAGCGGCAGCAGCGCGAGCAGGAGGACCATGCCGACAAGGCGTACGACATGTACACAGAGACGGTGGGGCGGCGCGGCGGCGCGCGGCTGGCGGCGCTGAGCCCGGCCGCGCTGCACTCCCCGCGGCGCGGCAGCGAGGACCCGGACGACTCGTACAACGTCAAGGACCTCAGGCACGAGCTAAAAGAGGTCGAGGAGAAGTTCCGCAAGGCGATGATACTAAACGCGCAATTAGACAATGACAAGGCGGCGTTCAAGTACCAGCTCGAACTGCTCAAGGATCGGATAGAGGAGTTGCGCGAGGAGTATGCGCAACTGCAGCGGGAGCACCGCGAGAAGTGTTCGTCCCACGAGCGGCTGAAGCGCGAGCACGCGTCGCTGGAGCGCGAGGTGTGCTGCGCGCGGGACGCGGTGCGCGCGCGGGACGCCGCCGCCGCCGCCGCGGGACACGCCTTCGTGGAGGCAGCCGCCGCCGCCGACGGGGAGCCGCAGGCGCAGGGCTTCGGCGCGGTGCCGCCGCTCGCGCTCGTCTCGCACCAGTCCGAGCAGCTGCTCAACGATGCCGGCGAGGGCACGCTCGACGTGCGATTGCAGAAACTGCTCGGCTCGAAGCAGGCGCTCGAGTCGGAGGTGCGCAAGCTGAAGCTGCAGCTGCACGAGGAGCGCGCCGCGCGGCAGAACGGCGTCTCCAACCACCACGACCAGGAGTACGAGAACGAACTGGAGACGCTGCGCAAGTCGGTGTCGGAGGCGAAGGCGCGGGCGGCGCGCGCGGAGGCGGAGGCGGCGCTGCAGGCGGCGGGCGTGGCGCGGCTCGAGGCGCAGGTGGCGCGGCTGCGCGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCCGGCTTCAGCGCGAGACGAGAGAGGCCCTCAATCGAGTGGAAGAATTGGAGACGGAGAACAGCCACCTGACCAAGCGACTCGACAAACTCAAGAACGCCAAGTCGGCGCTGCTCAAGGAGCTGTGA
- Protein Sequence
- MGDGSKMETPDNSDEESGEAFTDGDFGDSDEEMVLNSGESYKSAISVNETVNMDVKTVVAQTGTDGKDNNGLDNRTNGSIDPTKVNGSGNDIRVCNEVDDSCVGTENDISDVRRESYGEQHPSIVGILGGQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYTETVGRRGGARLAALSPAALHSPRRGSEDPDDSYNVKDLRHELKEVEEKFRKAMILNAQLDNDKAAFKYQLELLKDRIEELREEYAQLQREHREKCSSHERLKREHASLEREVCCARDAVRARDAAAAAAGHAFVEAAAAADGEPQAQGFGAVPPLALVSHQSEQLLNDAGEGTLDVRLQKLLGSKQALESEVRKLKLQLHEERAARQNGVSNHHDQEYENELETLRKSVSEAKARAARAEAEAALQAAGVARLEAQVARLRARQDHQDEHEEQLKQERRRLQRETREALNRVEELETENSHLTKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -