Zmor025040.1
Basic Information
- Insect
- Zophobas morio
- Gene Symbol
- rdx
- Assembly
- GCA_027724725.1
- Location
- JALNTZ010000014.1:22836-29160[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-35 1e-32 113.7 0.7 4 109 237 340 234 341 0.95 2 2 5.7 1.9e+03 0.2 0.0 78 109 341 372 339 373 0.86
Sequence Information
- Coding Sequence
- ATGTCGAGATATGTGGACAGCACAATCACAACCCATTTTATTTTTAAATTACTGTTCAGGCTGCCGGTGGTGAGTGATTGCTCGGCCGGCCAAACGGCCCGAGTCAGCTCCAACCTGCATCCCACGAGTACCATGGCCGTTAGCCGCGTGCCGAGTCCACCACCCCAGGAGGTAAACACCCCAGTGGCAGAGAACTGGTGTTACACGCAGGTGAAAGTCGTCaaattcagctacatgtggacaataaataattttagtttctgtcgtgaagaaatgggagaagttttaaagtcttcgacgttctcagcaggagccaacgacaaactaaaatgGTGTCTGAGGGTGAATCCCAAAGGCCTGGACGAAGAAAGTAAAGACTATCTTTCACTGTACCTTCTTCTTGTGTCGTGCAATAAGAGTGAAGTTAGAGCCAAATTTAAATTTAGTATATTAAATGCAAAAAGGGAAGAAACGAAGGCGATGGAGAGTCAGCGGGCGTACAGGTTCGTCCAGGGCAAGGACTGGGGTTTCAAGAAGTTCATCAGGAGGGATTTTCTGTTGGACGAAGCAAATGGTCTTCTGCCGGATGACAAACTTACGATATTTTGTGAAGTCAGTgttgttgctgatagtgtaaatatttctggccagtcgaatacgattcagtttaaagtgccagaatgtaggttatcggacgacttaggtttattattcgaaaatcaaaaatttagcgacgtaactttgtctgtagccggtagggagttccaggcacataaagcgatattagcagcgaggagtcctgttttccaagccatgttcgaacatgaaatggaagaaagaaaacacaatagagtagatattacggacgtagaccacgaagtattacgggaaatgcttagatttatatatacaggaaaagcatcaaatttagagaaaatggccgacgatttattagcggctgcggataagtatgcgttagaaagacttaaagtgatgtgtgaagaagcgctgtgtacgaatttatcaatagataatgccgccgaaatcctaatattggcagatctgcatagcgcagatcaactgaaagcacaagcaatagactttatcaatacGcatgcgacagatgtgatggacacaccagggtggaagagtatgatccagacccatccccacttgattgcagaagcgttccgtgcgttagcAACGCAACAAATACCCCCCATAGGTCCACCTCGGAAAAGGGTTAAACAGAGCTGA
- Protein Sequence
- MSRYVDSTITTHFIFKLLFRLPVVSDCSAGQTARVSSNLHPTSTMAVSRVPSPPPQEVNTPVAENWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSAGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCNKSEVRAKFKFSILNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTIFCEVSVVADSVNISGQSNTIQFKVPECRLSDDLGLLFENQKFSDVTLSVAGREFQAHKAILAARSPVFQAMFEHEMEERKHNRVDITDVDHEVLREMLRFIYTGKASNLEKMADDLLAAADKYALERLKVMCEEALCTNLSIDNAAEILILADLHSADQLKAQAIDFINTHATDVMDTPGWKSMIQTHPHLIAEAFRALATQQIPPIGPPRKRVKQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00645121; iTF_00792289; iTF_01275489; iTF_00078691; iTF_00130627; iTF_00268643; iTF_00873155; iTF_01040993; iTF_00334247; iTF_01530358; iTF_01040217; iTF_00903390; iTF_00201764; iTF_01287300; iTF_00181381; iTF_01291812; iTF_01447652; iTF_00269989; iTF_01146373; iTF_01435078; iTF_00966650; iTF_00139783; iTF_00209895; iTF_00395560; iTF_00169641; iTF_01344105; iTF_01343173; iTF_00624084; iTF_00343707; iTF_01481002; iTF_01480227; iTF_00415204; iTF_00753069; iTF_00733227; iTF_01123819; iTF_01196845; iTF_00423983; iTF_01283504; iTF_01449712; iTF_01445749; iTF_00243362; iTF_00189124; iTF_00242320; iTF_01450672; iTF_01444861; iTF_00271377; iTF_01345075; iTF_01216043; iTF_00422741; iTF_00376404; iTF_01310677; iTF_01293889; iTF_01348118; iTF_01468929; iTF_00004738; iTF_00651011; iTF_01510851; iTF_00368870; iTF_00768878; iTF_01035502; iTF_01060783; iTF_01251151; iTF_01015928; iTF_00465049; iTF_01308090; iTF_00235004; iTF_01381405; iTF_00305699; iTF_01046359; iTF_00669656; iTF_00283683; iTF_00170852; iTF_00987224; iTF_01022312; iTF_00841934; iTF_00349343; iTF_01410081; iTF_00026178; iTF_01252930; iTF_00956387; iTF_01058499; iTF_01290499; iTF_01400483; iTF_00388805; iTF_00431525; iTF_01225925; iTF_00328326; iTF_00470054; iTF_00631558; iTF_00629863; iTF_00735911; iTF_00166184; iTF_00308104; iTF_00870664; iTF_00911176; iTF_00838697; iTF_00330826; iTF_01163274; iTF_01536682; iTF_00022251; iTF_01329899; iTF_00370284; iTF_00641644; iTF_00813804; iTF_00830508; iTF_00951020; iTF_01369900; iTF_00020589; iTF_00244365; iTF_00459054; iTF_00854126; iTF_01188366; iTF_00329743; iTF_00394640; iTF_00759344; iTF_01120944; iTF_01014737; iTF_01366417; iTF_00764851; iTF_00110676; iTF_00466485; iTF_00807703; iTF_01278263; iTF_00416857; iTF_00814489; iTF_01227418; iTF_01239258; iTF_01371386; iTF_00632187; iTF_01498971; iTF_00196412; iTF_00740924; iTF_00998908; iTF_00413630; iTF_00434238; iTF_00949982; iTF_01258174; iTF_00032127; iTF_01442847; iTF_00647296; iTF_01047520; iTF_01307328; iTF_00396379; iTF_00396377; iTF_00722203; iTF_01060001; iTF_00442908; iTF_01383713; iTF_01132276; iTF_00249053; iTF_01373085; iTF_00630654; iTF_00981246; iTF_00137066; iTF_01098578; iTF_00138164; iTF_01097626; iTF_00392831; iTF_00894911; iTF_01013535; iTF_01096735; iTF_01186313; iTF_01351871;
- 90% Identity
- iTF_00422741;
- 80% Identity
- iTF_01296606;