Basic Information

Gene Symbol
lilli
Assembly
GCA_027724725.1
Location
JALNTZ010000003.1:7866025-7872141[-]

Transcription Factor Domain

TF Family
AF-4
Domain
AF-4 domain
PFAM
PF05110
TF Group
Unclassified Structure
Description
This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 2.3e-10 9.4e-06 26.3 19.1 407 513 63 186 48 187 0.59
2 5 1 4.1e+04 -5.5 8.8 178 240 220 282 190 315 0.42
3 5 1 4.1e+04 -15.5 37.5 77 254 308 475 295 499 0.34
4 5 0.013 5.3e+02 0.8 16.7 114 226 636 754 592 788 0.44
5 5 0.046 1.9e+03 -1.1 0.5 189 221 890 922 822 975 0.42

Sequence Information

Coding Sequence
ATGTACGACGAAAACGGGATGAATTTAGCTGGCAGCGAGCGAACTTTTATTGTTTCCCTCTTAACGCTCGATGCGGCGCGTCTTCAAACAACCGCACAAAAGAATATGTCGACCGCGGCGCGTCATACCCCGATCAGATTACCTCTTTATCTCGCCCTTGACATTTCCACCCATCACGCAGGTGCTAATCGTCACTCTAATTGCAGCGACCTCCAAGATGATCTAAATCTGTCAGATGACAGCGATGACGAACAAAAGCGCGACCAGCAATCTTCCAAGTTACCAGTAGAAAAGATGGTCTCCCCCCTGGGCGCCACCCCCGCCGTGAGCAACTTCTCCAAGATGGAGTTCGCCCCGGAGCCGGCGCCGCCGCCCCCCGCGTCGTCGTCGAGCGACTCCGGCTCGGACAGCGGCTCCGAGAGCGACTCCAGCAGCGACGACTCCGTCGAAGACAACGTGTCGTCGTCCAACGCCGCCAAGCCCGCCGCCGCTGACCCCGCGCCGTCCCCTCCGCCCGAGGAGAAGGACAAGAAGCGGTGGAACCTCGGCTCGTACCTCGAGTTCGACAACGCCAAAGCCGACTCGGCGCTATCGCCGAAGACGACGTCGCCCGTCACCGCCGACAAGAAGGCGCCCGACGAGTCGGACGGCAGCGACTCCAAGGACCTGGACAGCGTAGTCGCGGAGGCGTTGGCGGTGAAGGCCGTGCCGCTGCTGTCGAGCTTGTCGGACTCGGACGACAGCGCGACCGAGCGGCGCGCCAAGAGGCGCCGCCGAGTTACCAAGAGTTCGGAGAGTGACAGTGCCGACGAGCGGACGAGAAAAGCGAAGCCGGTGCCGGTGCAGCGGCCGAACGCGCGGACCAAGTCGGCGGACTCGTGCAGTGACGATGAGTTCAGTGCCAACGTGTGCAAGAAGCCGGAGGCGGCGAAACCGAAGCAAAGTCGCGGACGACCGCGGAAGGCGAAGCCGCCGCCACCCCCGGACAAGAAGCCCAGAAAGCGCGGCCGCCCCCCGAAGAACAGGCCGTCGCACCCGAGCTCCTCCGACGAGGAGGACAACGCCGAGAAGGAGAAGCAGCGGCCGGCGAGGCGGAGGACGGTCTCGAAGAGGGACGCGTCGAGCAGCGACGAGTCGGGCGCGAGCAGGAATCGCACGCCGAAGGAGAAGCCGAAGAAGAAGGCGAAGGAGGACGACGACTGGGGCAAGAAGGTCAAGAAGGAAGGGACGAAGAAGGAGACGTTCAGGAGGAAAGGTCGGACGACGATGTCCCAACACAAGAGCGCCGCAACGCTTCCCACAACGACGGATTCCAGCGACAGCGACTCGGGGCCATCCAAGGCCCGCCTACAACGAAGCCCCAGCTCCGAAAGTCGCCGGAGCAGGTCTTCAGACAGCGAGCACAACAGTAGGCCTTCCGGCAGCAAGGTGGAAGTAAAAGTGGAAGAAAGCAAGCCCATCAAAGACAAGAACAAGAGCGACACGTTACGGAAGCTCTTCACGCCGAAGCGCGACTCCGAGGGCGGGAAAGGCGGCGGCAAGGGCGGTGGTAAAGGCGGCAAGGGTGGCAAAGGCAAGGGCGGCGTGAACGTGATATTCGCCGACGGTGGCAACGAGAGGAGCAGTTCTCCAGTCGAAGAGGAATCAATGCCTACCATATCAAACCCAACGCTTCTATCACCCATCCCCAGCAAGGACATCAAACCGCCCCCGTCACCCTGTAACGAACCAATCAAATTTGTTAAGACTGAACCGGACGATGGCAATCACGAGGAGAAGATGGTGCCCGTGCGGGTGAAGATCAGCCTGAGCAACATCGACCTGAACGCGATCCAGTGCCTGAAGAACAAGCTAGAGATGCTGAAGCATCCGTACCTGAAGGAGCTGGAGGCGAAGGCGAAGGAGAAGAAGGCGGAGAAGGGGCCGTCGGACGTGCCCGAATTGAAACACAAATCAAAAAAGCGGAAGCGGAGGAACAGCTCAAGTTCCATTTCGTCGATGTCGACGGTGAGCAACATGTCGCACACGAGCAAGAAAGTGGAGCACAGGAAGGAGAGGGACAGCCACAAGTCCAAGAGGCGAAAAGAAGACGCCGAAATCTACCCGAGATCTCAAAGTGATAATATCAGTTTAACGAATGCACCTCCCACCAACCACGAGCGGGAAGGCAGCCGAAGCCGCCAACTGAGCTCACCTGTCGACAAAAACGTCAAGTCGCAGAGTACCAGAGAGTATTATTCGTACTTCGAGAAGCCCGACGAGCCGCTGGAGTGCGAAGAAAGGGCTCAAAGTCAGTACCTGAGCGACGCGACACGATTAAAACACCTGGCTGACAAAGAGACTGATACCACGAAGCAATGTATGCTGTACCTGGAGGCTGTACTTTTTTTCTTGTTAACGGGCAACGCCATGGAACTCACGAGGGTTACAGAAAACGCCTGTTTCACCATGTATAAAGACACGTTATCGTTAATAAGGTACATCACCTCGAAATTCAGAAGTCAGCATAATGCGTCTTCGAAGCACAACAAGCTCGCTGTGTTAAGTTATCGGTGCCAAGCACTTTTGTACTATAAGTTGTTCAAGATGAAGAAACATGAAGCGAAAGACTACCAGAAGGTCCTGAGCGAATACTTCAACAATAAGGCTGTGGCGATGCCCCCAGAGCAGCAGAATCAGCAGGGCCAAGGAACCCCGTCCCCCATGTCGCCCACGCCGTCTCCTGCTGGTTCGGTGGGTTCAGTGGGCAGCCAGTCGTCCGGCTACAGTAGCGGCGAGTTGGCGGCTCGAGGTAGTAACGTGGCGGCGGCGGTGCCGTCCACCCATACCCAAGGCATGGGCGGCCACGTCTGGGTTCCCCAGGGGATGTACAACGCCATGTACAAGCAGAACCAGAACTTCACATATCTTCTGTCTTGTCAGGACCTCTGGGACACGGCCGACAATCTAGTGATTAAGGGTAAACTCATAGATTTCTTTATCGACTTGGATAGGTTATGTAAGCCGTTGACGATGCACAGCTCGCTGATCGACTTAGTGAGGTATATTCGAGAGGGGATAAAGAGGTTGAACGAGAGTACGAATTGA
Protein Sequence
MYDENGMNLAGSERTFIVSLLTLDAARLQTTAQKNMSTAARHTPIRLPLYLALDISTHHAGANRHSNCSDLQDDLNLSDDSDDEQKRDQQSSKLPVEKMVSPLGATPAVSNFSKMEFAPEPAPPPPASSSSDSGSDSGSESDSSSDDSVEDNVSSSNAAKPAAADPAPSPPPEEKDKKRWNLGSYLEFDNAKADSALSPKTTSPVTADKKAPDESDGSDSKDLDSVVAEALAVKAVPLLSSLSDSDDSATERRAKRRRRVTKSSESDSADERTRKAKPVPVQRPNARTKSADSCSDDEFSANVCKKPEAAKPKQSRGRPRKAKPPPPPDKKPRKRGRPPKNRPSHPSSSDEEDNAEKEKQRPARRRTVSKRDASSSDESGASRNRTPKEKPKKKAKEDDDWGKKVKKEGTKKETFRRKGRTTMSQHKSAATLPTTTDSSDSDSGPSKARLQRSPSSESRRSRSSDSEHNSRPSGSKVEVKVEESKPIKDKNKSDTLRKLFTPKRDSEGGKGGGKGGGKGGKGGKGKGGVNVIFADGGNERSSSPVEEESMPTISNPTLLSPIPSKDIKPPPSPCNEPIKFVKTEPDDGNHEEKMVPVRVKISLSNIDLNAIQCLKNKLEMLKHPYLKELEAKAKEKKAEKGPSDVPELKHKSKKRKRRNSSSSISSMSTVSNMSHTSKKVEHRKERDSHKSKRRKEDAEIYPRSQSDNISLTNAPPTNHEREGSRSRQLSSPVDKNVKSQSTREYYSYFEKPDEPLECEERAQSQYLSDATRLKHLADKETDTTKQCMLYLEAVLFFLLTGNAMELTRVTENACFTMYKDTLSLIRYITSKFRSQHNASSKHNKLAVLSYRCQALLYYKLFKMKKHEAKDYQKVLSEYFNNKAVAMPPEQQNQQGQGTPSPMSPTPSPAGSVGSVGSQSSGYSSGELAARGSNVAAAVPSTHTQGMGGHVWVPQGMYNAMYKQNQNFTYLLSCQDLWDTADNLVIKGKLIDFFIDLDRLCKPLTMHSSLIDLVRYIREGIKRLNESTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-