Basic Information

Gene Symbol
ct
Assembly
GCA_027724725.1
Location
JALNTZ010000005.1:18898134-18912810[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.5e-27 3.5e-23 82.6 0.0 2 72 314 385 313 390 0.95
2 3 1.6e-32 2.2e-28 99.3 0.0 2 77 697 773 696 775 0.96
3 3 1.7e-30 2.4e-26 92.7 0.0 3 75 905 978 903 982 0.95

Sequence Information

Coding Sequence
ATGGAAGGCCAGCAAAAACGTATCAATCAATTAGTTGAAGAAGTACAAAGACTCCAGAGCACGATATCCAAACTGAAAGAAACCTCGATATCGCAGATCACTAGCTTAGAGAATCAATTAGAACAGAAAAGACAGATCATCGGGAAGTTAGAAGCCAAATTGGACCACCAGCGGGACTATGAGGACATGAAGAGGGAACTCAGTATCCTGAGGTCGGATCTCTCGAATAATCCAGAAACAACCAAATCTATAGACTTACTACTCGAGAAAACCAAAAACTTACAACAAAGCGAGAACAGGGTCAAAACGCCAACGCAAGAGGTCGAAGGGGTTGCAATAAATCCACCAAATCAACCAGCGGAGGCCCTCTCCCCCCTGTCCCCCCAAGGTCCCCTCCCACGTCCCTTCCAGAACGTAGAGACCTTCGGTAGCATGTTAGGCGAAGAGATTGTGGCCAATTGGCGCCGTAGCATAGAGCAGAATAATCGTCTAATCTCGCGATCACCCTGTATAGATGTCGCGAAGACGCCAACCTCGGTCATGGGAGTTCCCGACGCCTCGGTCACGCCCACAAACAATGAAAAATCGACGGCCTCGACGCCGCAACCTCCGGACTCACAACCGCCACAATCCTCACCCGTAGAACCCATCCTCAACGGAAACCCCAAAAGCCCCGAAGACAACAACAACCACCACGTCAGCAACAACAACATCCCCATGGCTACCATGTGCGCGGTCAACAACTTCCTGCGGGGGGAGGAGGCGCTGAAGAGCCCCTACCGCTTCGAAGACCACAGGTCACCGTTTCGCTTTGCGGAAGAGCTGGGGATGGCTCCGGGATCCATGGTGAGTCGACTGGGCGAGAGCTTGATCCCCAAGGGAGATCCCATGGAGGCCAAACTGCAGGAAATGTTGAGGTACAACATGGACAAGTACGCTTCACAGAATCTCGATACGTTGCACATATCGAGGAGGGTGCGGGAGTTGTTGTCGATACATAATATAGGACAGAGGCTTTTCGCCAAGTATATTTTGGGTTTGTCCCAAGGGACGGTGTCGGAGTTGCTGTCCAAGCCGAAGCCCTGGGATAAGCTCACGGAAAAAGGGAGGGACAGCTACAGGAAGATGCACGCTTGGGCTTGTGACGAGCAGGCGATTCTCCTCCTGAAATCGTTGATACCAAAGAAAGACAATTTTTCCTCAGGCAAAGATACAGGAATGCCAACGTTCGGCCGTCCAGAAAACGATCTAACCGAAGAGCGGATAGCTCATATCCTAAGCGAAGCAAGCCAATTCCAGCAGATGAAAACACACACCGAAGACAGCCATAGCAACGACGACTCGAAATCGCCGCACAATCAGTGTCTGAGTCCGTTTTCAAAGGACTCGTCGCAAAATCGGCGACTGAAGAAATACGAAAACGACGACATTCCACAAGAGAAGGTTGTGAGGATTTACCAGGAAGAGCTGGCTAAGTTGATGGGAAGGAGGGTCGAGGATATGAGGAATCCCCGGGAAGCTTTCCCTGGTATGTTTTTCCCGCAATTATTTAGTGGGGGTCAGATGGACAGGACCCAGGAAGAAATTCGGATGGCGTTGGATGCCTATCATCGGGAAATCCTCAAGTTGAATCAGTCCAACCCCGGTCAAATGCCGAACTTGGGTTTGCTGGCTCTCCAACACCAAGCCCTCGTGCAGCACCAACCCAACGGGGGCGTCCAGGATTTATCCCTCCCAAAAGACAAAAAATTAATGAACGGTGAAGAAAAAGACACCAAAGATTCGCCAAACGAGGATGCGTTACGGCATTCAGGCAGCGCTTTCAGTTTAGTTAGGCCGAAAATCGAACCCGGGACGCAACCATCGAGCGGTTCGACAGCTTCTAGTCCTTTAGGGAACGCGATCTTGCCGCCTGCGATGACCCCAACTGACGATTTCTCGGGATCTGCGGTCGCAAGTCCCCTCCAAAGAATGGCTTCCATCACGAACTCCCTCATCTCGCAACCTCCAGCCCAGCCTCACCACACCACCACCCAGCGACCCCTCAAAGCCGTCCTCCCGCCCATCACCCAGCAACAGTTCGATCAGTACAACAACCTCAATACCGAAGACATCGTGAAGAAAGTGAAAGAGCAGTTGAGTCAGTACTCGATAAGCCAGAGACTTTTCGGTGAATCCGTGCTGGGGCTGTCGCAAGGCTCAGTTAGCGATCTCCTCGCGCGCCCTAAACCGTGGCACATGTTGACCCAAAAGGGTCGCGAGCCCTTCATCCGCATGAAGATGTTTCTAGAAGACGATAACGCAGTGCACAAGCTAGTAGCGAGTCAGTACAAAATCGCTCCAGAGAAGCTGATGAGGACTGGGGGATATGGAGGAGCGGGCACTTCCATAGGCAAACCGATGCCTCCAACGCCGAAGATGCTGAATGACGCCGCGGGAATCATTAGCAAGATGCAGGAGACGCAGAACCTGCTACCACCTTCATTGCAGCTGGGACCGCCGCCAATGAGCCAGAACCCACAGCCGCCTCCGATGCTGCTGACGCCTCCAGGGGTGCCGCCACATCATGCCATCAGCTTGCAGAACCCCGACCATCTGAAGAAGAACCCCAGCCCGCATGGGATCCCGCATTCGCCGATGGGACAGCACCAGAGTTTGAGGAACATGCATCAGCACATGTCGCCTAGCGTGTACGAAATGGCAGCGCTGACGCAGGATTTGGATACGCAGGTCATCACGACGAAGATCAAAGAGGCGTTGCTCGCCAATAATATCGGACAAAAGATCTTCGGCGAGGCAGTCCTGGGGCTCTCCCAAGGTTCCGTCAGCGAGCTGCTTTCCAAACCCAAGCCTTGGCATATGCTCAGCATCAAAGGGCGAGAACCCTTCATCCGCATGCAACTCTGGTTGAACGACGCCCACAACATCGACCGCCTGCAGGCGCTCAAGAACGAACGTCGCGAGGCCAACAAGCGACGTCGCTCGTCAGGTCCCGGCGCACACGACAACAGTTCGGACACCTCGTCGAACGACACCTCCGAATTTTACCATTCCAACTCGCCCGGGCCTGGGCCCACCAAGAAGCAACGCGTGCTCTTCTCCGAGGAACAGAAGGAAGCGCTTCGGCTAGCCTTCGCCCTCGACCCCTACCCTAACGTGGCTACCATCGAGTTTCTGGCGTCCGAGCTGGGATTGTCTAGCCGTACCATCACCAATTGGTTCCACAATCACCGGATGCGATTAAAACAGCAGGTGCCGCACGGGATGGCGTCCGACGTTCCGCCGCGGGACCAGAGCGGGGCCCAGGGCCCCTTCGACCCCGTGCAGTTCAGGCTGTTGTTGAACCAAAGACTTTTAGAGTTATCTAAGGAACGAATGGGACTGAGCGGAGTCCCCTTGCCGTACCCGCCTTACCTGGCGGCCAACACGAACCTGGCGGCGCTGATCAGCCGGGGGTTATTACCTAGCGAAGTAGATATGGCGGCGTTGAACAACGCCGTCAAGGAGCAGATGAGTGGTTTGGACCTGTCCATGACGTCGCTGAAGCGCGAACCGGGCGACTTCGACGATGACGACGACGTGGAGAGCAACGTGGGCTCGGAGGACTCGAATCTCTCGGCGGGTAGTCTACTCAAGGCGGAGCCCAAGGAAGCTCCGGTCAATCAGGGGCGGAGCTCGAGGCGAAAGCCGGCGGCGCCGCAGTGGGTCAACCCCGATTGGCAAGAAAACGAGAAGGACAAACCCACCGGGGACGAAGTGATAATAAACGGAGTTTGTGTGATGCAGACTGAGGATTACGGGAGGAGAAGCTCGGAAGAGACGGTGAGAGTGGAACCGACGCCGGTCATGGACCGGTTTGAGGACGACCAAAGTGACGCTTCTTCCATTAGTAACGATAACGAGGCGCAAAATCAAAACGAAGAGAAGGAGACGAAGGAGGAGAACAGGAACGAAGAGGAGGTCGAGAAGCAGGAGGAGGAGAAACAGGAGACCGAAGACGAGAGGTGGGATTATTGA
Protein Sequence
MEGQQKRINQLVEEVQRLQSTISKLKETSISQITSLENQLEQKRQIIGKLEAKLDHQRDYEDMKRELSILRSDLSNNPETTKSIDLLLEKTKNLQQSENRVKTPTQEVEGVAINPPNQPAEALSPLSPQGPLPRPFQNVETFGSMLGEEIVANWRRSIEQNNRLISRSPCIDVAKTPTSVMGVPDASVTPTNNEKSTASTPQPPDSQPPQSSPVEPILNGNPKSPEDNNNHHVSNNNIPMATMCAVNNFLRGEEALKSPYRFEDHRSPFRFAEELGMAPGSMVSRLGESLIPKGDPMEAKLQEMLRYNMDKYASQNLDTLHISRRVRELLSIHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEQAILLLKSLIPKKDNFSSGKDTGMPTFGRPENDLTEERIAHILSEASQFQQMKTHTEDSHSNDDSKSPHNQCLSPFSKDSSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRVEDMRNPREAFPGMFFPQLFSGGQMDRTQEEIRMALDAYHREILKLNQSNPGQMPNLGLLALQHQALVQHQPNGGVQDLSLPKDKKLMNGEEKDTKDSPNEDALRHSGSAFSLVRPKIEPGTQPSSGSTASSPLGNAILPPAMTPTDDFSGSAVASPLQRMASITNSLISQPPAQPHHTTTQRPLKAVLPPITQQQFDQYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGAGTSIGKPMPPTPKMLNDAAGIISKMQETQNLLPPSLQLGPPPMSQNPQPPPMLLTPPGVPPHHAISLQNPDHLKKNPSPHGIPHSPMGQHQSLRNMHQHMSPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNIDRLQALKNERREANKRRRSSGPGAHDNSSDTSSNDTSEFYHSNSPGPGPTKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLASELGLSSRTITNWFHNHRMRLKQQVPHGMASDVPPRDQSGAQGPFDPVQFRLLLNQRLLELSKERMGLSGVPLPYPPYLAANTNLAALISRGLLPSEVDMAALNNAVKEQMSGLDLSMTSLKREPGDFDDDDDVESNVGSEDSNLSAGSLLKAEPKEAPVNQGRSSRRKPAAPQWVNPDWQENEKDKPTGDEVIINGVCVMQTEDYGRRSSEETVRVEPTPVMDRFEDDQSDASSISNDNEAQNQNEEKETKEENRNEEEVEKQEEEKQETEDERWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2