Basic Information

Gene Symbol
ct_1
Assembly
GCA_963966145.1
Location
OZ014541.1:685572-702704[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 2.5 2.3e+04 -3.9 0.0 47 56 135 145 128 147 0.81
2 4 2.5e-27 2.3e-23 82.6 0.0 2 72 316 387 315 392 0.95
3 4 1.6e-32 1.4e-28 99.3 0.0 2 77 699 775 698 777 0.96
4 4 1.7e-30 1.6e-26 92.7 0.0 3 75 908 981 906 985 0.95

Sequence Information

Coding Sequence
ATGGAGCGCGACAGGGAGGAGCGCATCAATCAATTAGTTGAAGAAGTACAAAGACTACAGAGCACAATATCCAAACTGAAGGAGACGTCGATATCGCAGATCTCCCGGCTGGAGGACCAGCTGGAGCAGAAGCGCCAGATCATCGTCAGGCTGGAGGCCAAGCTGGACCACCAGCGCGACTACGAGGACATGAAGCGGGAGCTGAGCGTCCTCAGGACGGACCCCTCGAACAATCCGGAGACCACCAAATCCATAGACCTGCTCCTCGAGAAGACCAAGAACCTGCAGCAGAGCGAGATCAGGGTCAAGACGCCGACACAAGAGGTCGAAGGGGTTGCATTAAATGCGCCAACCTGTCAACCATCGGAGGCACTGTCTCCTCTGTCCTCCCCAGCCACCCTGCCTCGTCCCTTCCACAACGTAGAGCAATTTGGTAGCATGTTAGGCGAGGAGATCGTGGCGAACTGGCGCCGTAGCATAGACCACACTAACCGTCTAATCCCCCGCTCGCCCTGTGTAGATGTCGCGAAGACGCCGACCTCCCTGATGGGCATCCCCGAGTCCTCGGCCACGCCCACCACCAACGAAAAATCGACGGCGTCGACGCCGCAACCTCTGGACCCGCAACCCCCGCAATCGTCCCCCGCGGAACCCATCCTGAACGGCAACCCCAAGAGCCCCGAGGAcaacaacaaccaccacgtcagcAACAACAACATCCCCATGGCCACCATGTGCGCCGTCAACAACTTCCTCCGCGGCGACGAAACCCTCAAGAGCCCTTACCGGTTCGACGACCACAGGTCGCCCTTCCGGTTCGCTGAAGAGTTGGGGATGGCGCCCGGGTCCATGGTGGGGCGCCTGGGCGAGAGTCTCATCCCCAAGGGCGACCCCATGGAGGCCAAGCTCCAGGAGATGCTGAGGTACAACATGGACAAGTACGCCTCGCAGAATCTAGACACTTTACACATATCCAGAAGGGTTAGGGAGTTGTTGTCGATACACAACATCGGCCAAAGACTCTTCGCCAAGTACATTCTGGGACTGTCCCAAGGGACCGTGTCGGAGTTGCTCTCCAAACCCAAACCTTGGGACAAACTCACCGAGAAAGGAAGAGACAGCTACAGGAAGATGCACGCGTGGGCTTGCGACGAACAAGCGATTCTCCTCTTGAAGTCACTCATACCAAAGAAAGACAATTTTTCCTCAGGCAAAGATACAGGAATGCCAACGTTCGGCCGTCCGGAAAACGATCTGACGGAGGAGAGAATAGCGCACATCTTGAGCGAAGCCAGCCAGTTCCAACAGCTGAAGTCGCACAACACCGAAGACAGTCACAGCAACGACGACTCGAAGTCGCCGCACAACCAATGTCTCAGTCCCTTCTCGAAGGACTCGTCGCAGAACCGAAGACTCAAGAAGTACGAAAACGATGACATTCCACAAGAAAAAGTCGTGAGGATCTACCAGGAGGAGCTGGCCAAGTTGATGGGGCGGAGGATGGAGGACATGAGGAACCCGAGAGAAGCCTTCCCGGGTATGTTCTTCCCGCAATTGTTCACTGGGGGACAGATGGACCGGACCCAGGAGGAGATCAGGATGGCGCTCGACGCCTACCACAGGGAGATAGTCAAGTTGAACCAGTCGAACCCGGGCCAAATGCCGAATTTGGGGTTGCTGGCGCTGCAGCAGCAAGCTTTGGCCCAGCACCAACCCAACGGCGGCGTCCAAGACTTGTCGTTGCCCAAAGACAAGAAACTCCTCAACGGCGAAGACAAGGACTCCAAAGACCCGAACGAAGACGCTTTGAGACACTCCGGGAGTGCTTTCAGCTTGGTCAGGCCAAAAATCGAACCTGGGACCCAACCGTCGGGAGGTTCCACAGCTTCTAGTCCTTTGGGCAACGCGATCTTGCCCCCGGCGATGACCCCCAGCGACGAGTTCTCCGGATCGGCGGTGGCGAGTCCCCTCCAAAGAATGGCTTCCATCACGAACTCGCTCATATCGCAACCTCCCGCCCAGCCGCACCACACCTCCAGCCAGCGCCCTCTCAAGGCGGTGCTGCCTCCAATAACGCAGCAGCAGTTCGACCAGTACAACAACCTCAACACCGAGGATATAGTGAAGAAGGTGAAAGAACAGCTGAGCCAGTACTCGATAAGCCAGAGGTTGTTCGGCGAGTCCGTGCTGGGGCTGTCGCAGGGGTCGGTGAGCGACCTCCTGGCGCGGCCCAAGCCGTGGCACATGCTGACGCAGAAGGGACGCGAGCCCTTCATCCGCATGAAGATGTTCCTGGAGGACGACAACGCGGTACACAAACTCGTAGCCAGCCAGTACAAGATTGCCCCCGAGAAGCTGATGCGCACCGGGGGCTACGGCGGCGCCGGTGCCTCCATAGGCAAGCCGATGCCCCCCACCCCCAAGATGCTGAACGACGCCGCCGGCATCATCAGCAAGATGCAGGAGACGCAGAGTCTGCTGCCGCCGTCGCTCCAACTCGGCCCGCCGCCGCTCAACCAGAACCCCCAGCCACCGCCGATGTTGCTCACGCCCCCGGGAGTGCCGCCCCACCACGCCATCAGTCTCCAGAACCCGGACCACCTGAAGAAGTCCAATCCCAGTCCGCACGGGATACCGCACTCGCCCATGGGGCAGCACCAGAGTCTCAGGAACATGCACCAACACATGTCGCCCAGCGTCTACGAAATGGCGGCGCTCACGCAGGATCTCGACACGCAGGTTATCACCACCAAGATCAAGGAGGCGCTGCTTGCCAACAACATCGGACAAAAGATTTTTGGGGAGGCCGTGCTGGGGTTGTCCCAGGGCTCGGTGAGCGAGCTTCTGTCGAAGCCGAAGCCTTGGCACATGCTGAGCATCAAGGGCAGGGAGCCCTTCATCCGAATGCAACTGTGGCTGAACGACGCGCACAACATCGACCGCCTGCAGGCGCTGAAGAACGAGCGCCGGGAGGCGAACAAGCGGCGGCGGTCGTCCGGCCCCGGGGCGCACGACAACAGCTCCGACACCTCCTCGAACGACACGTCTGAGTTCTACCATTCCAACTCGCCGGGCCCCGGCCCCACCAAGAAGCAGCGCGTGCTCTTCTCCGAGGAGCAGAAGGAGGCGCTGCGGCTGGCGTTCGCGCTCGACCCCTACCCCAACGTGGCCACCATCGAGTTCCTGGCGTCCGAGCTGGGCCTGTCGAGCCGCACCATCACCAACTGGTTCCACAACCACCGCATGCGGCTGAAGCAGCAGGTGCCCCACGGGATGGCCTCGGACGTGCCGCCGCGCGACCAGACGGGCAGCCAGGGCCCCTTCGACCCCGTCCAGTTCCGGCTGCTGCTCAACCAGCGGCTGCTGGAGCTGTCCAAGGAGCGCATGGGGCTGGGCGGCGTGCCGCTCCCCTACCCGCCCTACCTCGCCGCCAACACCAACCTGGCGGCGCTGATCTCGCGCGGCCTCCTCCCCGGCGAGGTGGACATGGCCGCGCTGAACAGCGCCGTCAAGGAGCAGATGAGCGGCCTGGACCTGTCCATGACCTCGCTGAAGCGCGAACCGGGCGACttcgacgacgacgacgacgtcGAGAGCAACGTCGGCTCCGAGGACTCGAACCTCTCCACCGGCAGCCTGCTCAAGGCCGAGCCCAAGGAGGCGCCCGTCAACCAGGGCCGCAGCTCGCGGAGAAAACCGGCGGCGCCCCAGTGGGTCAACCCCGACTGGCAGGACACCGACAAGGACAAGCCCACCGGCGACGAGGTCATCATCAACGGCGTCTGCGTCATGCAGACGGAGGACTACGGCCGCAGGAACTCCGAGGAGACGGTGCGGGTGGAACCGACGCCGGTCCTGGACCACCGGTTCGAGGACGACCAGAGCGACGCCTCCTCCATCAGCAACGACAACGAGACGCAGAATCAAAACGAAGACAAAGACAAAACGGAAGAAACGCGAAACCAGTCGGAAGAAGCCGACAAACAAGAAGAGGACAAACAAGAAACCGAAGACGAGAGGTGGGATTATTGA
Protein Sequence
MERDREERINQLVEEVQRLQSTISKLKETSISQISRLEDQLEQKRQIIVRLEAKLDHQRDYEDMKRELSVLRTDPSNNPETTKSIDLLLEKTKNLQQSEIRVKTPTQEVEGVALNAPTCQPSEALSPLSSPATLPRPFHNVEQFGSMLGEEIVANWRRSIDHTNRLIPRSPCVDVAKTPTSLMGIPESSATPTTNEKSTASTPQPLDPQPPQSSPAEPILNGNPKSPEDNNNHHVSNNNIPMATMCAVNNFLRGDETLKSPYRFDDHRSPFRFAEELGMAPGSMVGRLGESLIPKGDPMEAKLQEMLRYNMDKYASQNLDTLHISRRVRELLSIHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEQAILLLKSLIPKKDNFSSGKDTGMPTFGRPENDLTEERIAHILSEASQFQQLKSHNTEDSHSNDDSKSPHNQCLSPFSKDSSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRMEDMRNPREAFPGMFFPQLFTGGQMDRTQEEIRMALDAYHREIVKLNQSNPGQMPNLGLLALQQQALAQHQPNGGVQDLSLPKDKKLLNGEDKDSKDPNEDALRHSGSAFSLVRPKIEPGTQPSGGSTASSPLGNAILPPAMTPSDEFSGSAVASPLQRMASITNSLISQPPAQPHHTSSQRPLKAVLPPITQQQFDQYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGAGASIGKPMPPTPKMLNDAAGIISKMQETQSLLPPSLQLGPPPLNQNPQPPPMLLTPPGVPPHHAISLQNPDHLKKSNPSPHGIPHSPMGQHQSLRNMHQHMSPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNIDRLQALKNERREANKRRRSSGPGAHDNSSDTSSNDTSEFYHSNSPGPGPTKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLASELGLSSRTITNWFHNHRMRLKQQVPHGMASDVPPRDQTGSQGPFDPVQFRLLLNQRLLELSKERMGLGGVPLPYPPYLAANTNLAALISRGLLPGEVDMAALNSAVKEQMSGLDLSMTSLKREPGDFDDDDDVESNVGSEDSNLSTGSLLKAEPKEAPVNQGRSSRRKPAAPQWVNPDWQDTDKDKPTGDEVIINGVCVMQTEDYGRRNSEETVRVEPTPVLDHRFEDDQSDASSISNDNETQNQNEDKDKTEETRNQSEEADKQEEDKQETEDERWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00870456;
90% Identity
iTF_01567616;
80% Identity
iTF_01409844;