Znev006044.1
Basic Information
- Insect
- Zootermopsis nevadensis
- Gene Symbol
- nfxl1
- Assembly
- GCA_000696155.1
- Location
- NW:247545-267492[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 1.1 6.4e+03 -3.3 1.1 15 19 172 176 171 176 0.81 2 18 0.15 8.7e+02 -0.5 0.8 4 10 207 213 206 213 0.95 3 18 4.8e-08 0.00028 20.2 16.4 1 19 221 238 221 238 0.99 4 18 9.7e-07 0.0056 16.1 17.1 1 19 274 292 268 292 0.86 5 18 2 1.1e+04 -4.1 2.6 6 10 317 321 316 321 0.89 6 18 6.5e-09 3.7e-05 23.0 15.5 1 19 327 345 327 345 0.99 7 18 2 1.1e+04 -4.2 1.5 1 2 374 375 369 377 0.53 8 18 3.2e-05 0.18 11.2 9.7 1 18 380 397 380 398 0.97 9 18 0.66 3.8e+03 -2.6 0.4 1 5 407 411 407 416 0.73 10 18 2.4e-05 0.14 11.6 15.6 1 18 432 449 432 450 0.92 11 18 1e-10 5.8e-07 28.8 14.3 1 19 459 477 459 477 0.99 12 18 0.74 4.2e+03 -2.7 1.0 5 10 505 510 505 510 0.89 13 18 0.00087 5 6.6 8.1 10 19 526 535 523 535 0.90 14 18 0.0007 4 6.9 4.7 3 12 546 555 538 555 0.79 15 18 2 1.1e+04 -4.3 3.2 14 19 585 590 585 590 0.86 16 18 6e-06 0.035 13.5 4.9 1 12 626 637 626 640 0.95 17 18 4.1e-07 0.0024 17.3 15.1 4 19 668 683 666 683 0.91 18 18 1.9e-06 0.011 15.2 10.2 1 16 728 742 728 748 0.89
Sequence Information
- Coding Sequence
- ATGAATGATACACATCGAGGAGGAGGACGTGGTAGTAATCCGTGGAACCGGGGTGGAGGGAGAGGTGGTTATAATCAGAATCATGCTTCCAGAAAGAAACCTAGTCCAGAAGTCTTGGCACAAAATAAGTTCTATGAAGCACAAGCACGTCTGCAGGCATCTGTCCAAAAACATATCAAACAAGAATATGATTCTTCATCCGAAGAGGAAGAACTACAAAGTGACAACATTCTTGGATCTGTACTGCAACTCTATTCACAAATTGGAGGAAAGATTGAAGACTTAGGAAGAACACAGCGTTTCTTAGAGGATGCTTTTCAGTCTGGTGCCGCCTCTTGCCTTATTTGTATTGGATCTGTGAAAAGGAATGATGCTATATGGAATTGTGTTGAGTGTTACTGCTTTTTCCACCTGACCTGTGTTCAGCGTTGGGCAAAGGACAGTGTAGCACATCAGAAACAAGCTCTTGAGGATCAGCCACGGGGATTTGCAGTTGTCAGTTTTAAATGGGCATGTCCCAAGTGTCGCCATGATTATGATCAGAATGATACGCCTCAGAGATATCGCTGCTTTTGTGGTCAGACAGAAGATCCATCATGTCATCCCTGGTTGGTACCACATTCTTGTGGGGAGACATGTGGAAAGGCCCTCCTGCCACTCTGTGGGCATAATTGCTTGCTTCTTTGTCACCCAGGGCCATGTCCACCATGTCCAAAAATGGTTAAGACTGAATGTTTCTGTGGTAACCAGCCACCACGTTTGCAGCGTTGTAGTAACAAGACTTGGTCGTGTGGATCAAAGTGTGGTCATACTTTGGGATGTGAACGGCACGCATGTATTGATGTGTGTCATCCAGGGGCATGTCCACCCTGCCCCAAGACAAGTGTTCAGAGTTGTGAGTGTGGTCAACAGAAAGTTCTGCGACCTTGTGCTACTCCAAACTGGCAGTGTGAACAGAAATGTGGTGAAGCCCTCAGCTGTGGTAATCACAAGTGTGCAAGAGATTGTCATTCTGGTTCATGTGGTCCGTGCCCATTAACTGAGGCCCGCTCATGTCCATGTGGGAAGGCTTCTTTTATTCTACCTTGTACACAAGAGACGCCCACCTGTGGGGACACCTGCGGGCATACGCTTGAGTGTGGAGCTCATGTCTGTTCACGAAGCTGTCACCGTGACAAATGTGGTAGTTGTTTAATGGTGGTAACAAAGAAGTGTCGTTGTGGTCTTCATAGCAAGGAACTGCCCTGTCAGAAGGAATTCCTATGTGAAACCAAGTGTAAACAAACTAAAGACTGTATGCGGCATCCCTGCAATCGTAAGTGCTGTGATGGGAATTGCCCACCATGTGAAAAGCCATGTGGTAGAACTCTGCAGTGTGGAAATCATAAGTGCACATCTGTATGCCATCGTGGGCCCTGTTATCCCTGCCCATTGACTGCAGAAATAAAGTGCCACTGTGGACTGACAGTACTTACTGTCCCGTGTGGACGCAAGAAACAGACTCGACCGCCACGTTGCAGCAAGCCATGCAGGATAAAGCCTAATTGTCACCATCCCAGTCGAGAGCCTCATCGCTGTCACTTTGGTGATTGTCCACCTTGCCAACAAGTGTGTGGGATGTTACTAGATCCATGTAAGCACAAATGTCCAGCCCCGTGTCATTCTGCTGTGTGGGTTAAGGTAGAAGAGGATCAAAAGAAGCCAGTCGGTCCATGGGACAAAGTGCAGCCACAAGTGGAGTTAAAAGCTTTGCCTTGTCCTAGATGCAAGGTACCAGTGCCAGTAATGTGCCTTGGCAGTCATGAGACACTTGACTGGCCCTGCTACGTCGCAAATCCTACATCATGTGAACGCGAGTGTGGGCGAATGTTGATGTGTGGGAACCATACCTGTAGGCTGCTGTGTCATACAGTTGAGGGGGCTCCCAATGAAACAGCTGCTGGAGATAATTGTGAACAGTGTGAGTTAGGTTGCACGAAGCCTCGTCCAGAAGGTTGCACACACATCTGCCAGAAGCCTTGTCATTCAGGGGACTGTCCACCATGTTCCCACATGTTGCGTGTGCAGTGTCACTGCAGCCTCGCCCAGTTGTATGTACGTTGCAGTGAATGGACATCTGCTGAGGATGACAAGAAACAGGCCCTGACAAGTTGTGGCAATCAGTGTCCCAAAAATtATGAATGTGGACATCGTTGTCGTATACTATGTCACCCTGGTGATTGCCCTGACCCAGATATGTGTCGGAAAAAGGTAAAACTCACTTGTCCCTGTCGTCGGCTTAGAAAGGAATTTCCTTGTGATGTAGTGAGAACAGGCCATGCCAAAGTTGACTGTGATGACATCTGCAGGCAGAAGAAAGAACAAGAGATGAAGATAAAGGagcaagagaaaattaaaaagcagtTGGAGGAGGAACGCCAGAATCAGAAGGAAGTGGAAAAATTCCTGAAAAAGTTCCAGGCTCGCAAGAAACACCGCGAACGTCACCGCTTTGAAGAACAAGACTCTAGTTCCTTTTTTGCTCACTACTGGGTGTTGTTATTTAGTTTGTTAGGGGTATTAATGGCTTTTTACTACCTGTTCCTATCATAG
- Protein Sequence
- MNDTHRGGGRGSNPWNRGGGRGGYNQNHASRKKPSPEVLAQNKFYEAQARLQASVQKHIKQEYDSSSEEEELQSDNILGSVLQLYSQIGGKIEDLGRTQRFLEDAFQSGAASCLICIGSVKRNDAIWNCVECYCFFHLTCVQRWAKDSVAHQKQALEDQPRGFAVVSFKWACPKCRHDYDQNDTPQRYRCFCGQTEDPSCHPWLVPHSCGETCGKALLPLCGHNCLLLCHPGPCPPCPKMVKTECFCGNQPPRLQRCSNKTWSCGSKCGHTLGCERHACIDVCHPGACPPCPKTSVQSCECGQQKVLRPCATPNWQCEQKCGEALSCGNHKCARDCHSGSCGPCPLTEARSCPCGKASFILPCTQETPTCGDTCGHTLECGAHVCSRSCHRDKCGSCLMVVTKKCRCGLHSKELPCQKEFLCETKCKQTKDCMRHPCNRKCCDGNCPPCEKPCGRTLQCGNHKCTSVCHRGPCYPCPLTAEIKCHCGLTVLTVPCGRKKQTRPPRCSKPCRIKPNCHHPSREPHRCHFGDCPPCQQVCGMLLDPCKHKCPAPCHSAVWVKVEEDQKKPVGPWDKVQPQVELKALPCPRCKVPVPVMCLGSHETLDWPCYVANPTSCERECGRMLMCGNHTCRLLCHTVEGAPNETAAGDNCEQCELGCTKPRPEGCTHICQKPCHSGDCPPCSHMLRVQCHCSLAQLYVRCSEWTSAEDDKKQALTSCGNQCPKNYECGHRCRILCHPGDCPDPDMCRKKVKLTCPCRRLRKEFPCDVVRTGHAKVDCDDICRQKKEQEMKIKEQEKIKKQLEEERQNQKEVEKFLKKFQARKKHRERHRFEEQDSSSFFAHYWVLLFSLLGVLMAFYYLFLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00396952;
- 90% Identity
- -
- 80% Identity
- -