Csec001274.1
Basic Information
- Insect
- Cryptotermes secundus
- Gene Symbol
- nfxl1
- Assembly
- GCA_002891405.2
- Location
- NW:64098-89430[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 1.1 6.9e+03 -3.3 1.1 15 19 172 176 171 176 0.81 2 20 0.7 4.4e+03 -2.7 0.9 4 10 207 213 207 213 0.91 3 20 1.1e-07 0.0007 19.1 14.4 1 19 221 238 221 238 0.99 4 20 2 1.2e+04 -4.1 0.9 1 4 264 267 264 267 0.95 5 20 1.4e-07 0.00084 18.8 14.3 1 19 274 292 274 292 0.99 6 20 2 1.2e+04 -4.1 2.6 6 10 317 321 316 321 0.89 7 20 3.1e-10 1.9e-06 27.2 13.7 1 19 327 345 327 345 0.99 8 20 4.1e-05 0.26 10.9 9.9 1 18 380 397 380 398 0.97 9 20 0.66 4.1e+03 -2.6 0.4 1 5 407 411 407 416 0.73 10 20 0.00024 1.5 8.4 8.9 1 18 432 449 432 450 0.92 11 20 2.7e-10 1.7e-06 27.4 13.1 1 19 459 477 459 477 0.99 12 20 2 1.2e+04 -4.4 1.7 9 13 483 487 481 487 0.71 13 20 0.63 3.9e+03 -2.5 1.0 5 10 505 510 505 510 0.90 14 20 0.00024 1.5 8.4 6.3 10 19 526 535 523 535 0.90 15 20 0.0018 11 5.6 6.0 3 12 546 555 538 555 0.79 16 20 0.72 4.5e+03 -2.7 3.7 14 19 584 589 584 589 0.89 17 20 1.7 1.1e+04 -3.9 1.1 6 10 615 619 614 619 0.85 18 20 4.6e-06 0.029 13.9 5.9 1 12 625 636 625 636 0.96 19 20 7.6e-06 0.047 13.2 11.1 4 19 667 682 665 682 0.93 20 20 2.3e-06 0.014 14.9 13.0 1 16 727 741 727 747 0.89
Sequence Information
- Coding Sequence
- ATGAACAGTTTACAACGAGGAAGGGGACGTGGTAGTAATCCATGGAACCAGGGTGGAGGAAGAGATGGTCATAATCAGAATCGTGCTGTCAAAAAGAAGCCTAGTGCAGAATTTCTGGCGCAAACCAAATTCCAGGAAGCACAAGCCCGATTACAGGCATCTGTTCAGAAACACATCAAACAGGAGTATGATTCTTCATCTGAAGAGGAAGAACTAGAAAGTGACAGCATTCTTGGATCTGTACTGCAGCTGTATTCACAAGTTGGAGGGAGGAGTGAAGATTTAGGAAGAACCCAACGTTTTTTGGAAGACGTGTTTCAGTCTGGTGCTGCTTCTTGCCTTATTTGTATAGGATCTGTTAAAAGGAATGATGCGATATGGAGTTGTGTTGAATGTTACTGCTTTTTCCACCTTGCCTGCATCCAGCGTTGGGCGAAGGATAGTGTGGCACATCAGAAACAAGCTCTTGAGGATCAGCCGCAAGGAATTGTAGTTACCAGGTTTAAATGGGCTTGTCCTAAGTGTCGCCATGATTATGAGCAGACTGACACTCCCCAAAGGTATTGCTGTTTTTGTGGTCGTACAGAAGATCCACCATTTCACCCATGGTTGACACCACATTCTTGTGGGGAAAGATGTGAAAAGGCACTCCAACCTATCTGTGGGCATAACTGCTTACTTCTGTGTCACCCAGGACCATGTGCACCATGTCCAAAAATGGTTAAGACTACATGCTTCTGTGGTAACCAGCCTCCAAGATTACAGCGCTGTAGCAACAAGTCTTGGTCATGTGGTTCACATTGTGGGCGCTTGTTGGGATGTGGCCGACATGAATGTGTTGAAGTATGTCATCCTGCGGAATGCCCACCCTGTCCCAAGACAAGTGTCCAGAGTTGTGAGTGTGGTCAACAGAAAGCTCTGCGACCTTGTGCTGATCCAAAATGGCAGTGTGAACAGAAATGTGGAGAAGTCCTCAGCTGTGGTAATCACAAGTGTGAAAAAGTTTGTCATTTTGGTTCGTGTGGTCCATGCCCACTGACAGAGGCCCGTTCTTGTCCATGTGGGAAGACTTCTTATATACTACCTTGTACACAAGAGATTCCCACCTGTGGGGACACTTGTGGTCGCACACTTGAGTGTGGGGCTCATGTCTGTTCACGAAGTTGTCACCGTGACAAATGTGGCACTTGTTTAGAGATGGTGACTAAGAAATGTCGATGTGGTCTTCATAGCAAAGAGCTGCCCTGTCAGAAGGAATTCCTATGTGAAACCAAGTGTAAACGTACCAAAGGCTGTATGCGTCATCCCTGCAATCGCAAGTGCAGTGATGGAAATTGTCTCCCATGTGAAAAGCCATGTGGCAGAACTTTGCGTTGTGGAAATCACAAGTGCGCATCCATGTGCCATCGTGGGCCCTGTTACCCATGCCCATTGACAGCAGAAGTAAAATGCCATTGTGGATTGACGGTACTCACTGTCCCGTGTGGACGCAAGAAGCAGACTCGACCACCACGTTGCAATAAGCCATGCAGAATATTGCCTGACTGTCACCATCCAAGTCGGGAGACTCATCGCTGTCACTTTGGTGATTGCCCACCTTGCCAGCAAGTGTGTGGGAAGTTACTAGAGCCATGTAAGCACAAGTGTCCAGCCCCATGTCACTCTGCTGTATGGGTTAAACTGGAGGAGAACCGAAAGCCTGTGGGTCCATGGGACAAGGTGCAGTCACAGGTGGAGTTAAAAGCACTGCCTTGTCCTAGCTGCAAGGTACCAGTGGCAGTAACCTGCCTTGGAGGTCATGAGACATGTGATTGGCCCTGCTATATTGCAAATCCGACATCATGTCAGCGCAGATGTGGGCGAATGTTGGCTTGTGGAAATCACACCTGTAACCTGTTGTGTCACAGAGTTGAGCAGGCTCCTAATGAAGTGGCTGTTGGTGATAACTGTGAACAATGTGAGTTAGGCTGCAGCAAACCACGCCCAGAAGGCTGTGTACACGCCTGCCTGAAGCGCTGTCATCCAGGTGACTGTCTGCCATGTAGCCAAATGTTGCGGGTGCAGTGTCACTGTGGCCTCaaccaattgtatgtatgttgcAGTGAATGGACATCTTCCAGTGCGGACAAGAAACAGAGCCTGAAAAGTTGTGGCAATCAGTGCCCCAAAAATtatGAGTGTGGGCATCGTTGTCGTGCACCCTGTCATCCTGGTGAGTGCCCTGATCCAGAGATGTGTCGTAAGAAGGTGAAACAAACATGCCCCTGCCGTCGACTGAAAAAGGAATTTCCTTGTGATGTAGTAAGAATAGGCCAAGTCAAAGTTGAATGTGATGATGTGTGCAAGCAGAAGAAAGATGAGGAGATGAagATAACGGAGGCAGAGAAGTTAAGAAAGCAGTTGGAGGAAGAGCGTCGGAATCAAGAGGAAGTAGAAAAATTCCAGAAAAAGTTCCAGGCACGCAAGAAATACCGTGAACGCCGGCACCATGAAGAACAGAACTCTAGTTCCTTTCTTGCTCACTATTGGTATTTTTTGGTTGGTTTGTTAGGAGTAATGTTGGCATTTTATTACATGATCCTGTTATAG
- Protein Sequence
- MNSLQRGRGRGSNPWNQGGGRDGHNQNRAVKKKPSAEFLAQTKFQEAQARLQASVQKHIKQEYDSSSEEEELESDSILGSVLQLYSQVGGRSEDLGRTQRFLEDVFQSGAASCLICIGSVKRNDAIWSCVECYCFFHLACIQRWAKDSVAHQKQALEDQPQGIVVTRFKWACPKCRHDYEQTDTPQRYCCFCGRTEDPPFHPWLTPHSCGERCEKALQPICGHNCLLLCHPGPCAPCPKMVKTTCFCGNQPPRLQRCSNKSWSCGSHCGRLLGCGRHECVEVCHPAECPPCPKTSVQSCECGQQKALRPCADPKWQCEQKCGEVLSCGNHKCEKVCHFGSCGPCPLTEARSCPCGKTSYILPCTQEIPTCGDTCGRTLECGAHVCSRSCHRDKCGTCLEMVTKKCRCGLHSKELPCQKEFLCETKCKRTKGCMRHPCNRKCSDGNCLPCEKPCGRTLRCGNHKCASMCHRGPCYPCPLTAEVKCHCGLTVLTVPCGRKKQTRPPRCNKPCRILPDCHHPSRETHRCHFGDCPPCQQVCGKLLEPCKHKCPAPCHSAVWVKLEENRKPVGPWDKVQSQVELKALPCPSCKVPVAVTCLGGHETCDWPCYIANPTSCQRRCGRMLACGNHTCNLLCHRVEQAPNEVAVGDNCEQCELGCSKPRPEGCVHACLKRCHPGDCLPCSQMLRVQCHCGLNQLYVCCSEWTSSSADKKQSLKSCGNQCPKNYECGHRCRAPCHPGECPDPEMCRKKVKQTCPCRRLKKEFPCDVVRIGQVKVECDDVCKQKKDEEMKITEAEKLRKQLEEERRNQEEVEKFQKKFQARKKYRERRHHEEQNSSSFLAHYWYFLVGLLGVMLAFYYMILL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01289423; iTF_00370647; iTF_01567505;
- 90% Identity
- -
- 80% Identity
- -