Znev005342.1
Basic Information
- Insect
- Zootermopsis nevadensis
- Gene Symbol
- pnr
- Assembly
- GCA_000696155.1
- Location
- NW:144478-162214[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6 1.1e+04 -7.0 4.2 21 26 13 18 11 18 0.80 2 2 1.7e-18 3.3e-15 54.8 3.7 1 35 468 501 468 502 0.98
Sequence Information
- Coding Sequence
- ATGTGTAACATACCGCcgaaattttatgaactttgtcgTCTTTGTTTATCGTGTGATGGTGTGAAATCGTCTATTTTCGATGACGAAGGAACTCAACGTAACTTTCCACTTAAAATAATGACGTGTCTTTCTATATTGGTCTCAGAGAGGGATCTTCTGCCACCATCAATATGTCATCGTTGTGTATACAAATTGGACGTATTGTATGACTTCAGGGAAGTGTCAAGAAAAtcagatgtaattttaaagcaatacTTAAGCTACCCAGGTCATTTAGCCAATACAACACAGGTGTCAGTGAAGAAAGAGACTGAAAATTTGGTGGACTGTAGCATTAAAAAGGCTGATCAAAATGGTGTTCAGGATGAAACGACATCTGCGTCTCCATGCAGTGAAAGGAGCATTGACAAGGAAGCACAGGAGATGGTTGCTGCGTTAGAACTACGAATCAAGGAGGAGCCTCTAGACGAAGAAGAGGTACAGGAGGAGGAGGGGGAGGAAGACAGAGCAGAAGGAGGAGAGGGCATATGTGATGGTGGTTTGCATATGAATGGTGGGTCCTACAGAGTTATATCAGGTAAGGGGATGAAATTGGAAGATGAGTCATCAGAACACATTGAAAGGGAGAATGTGCTTCTGGATCAAGGACTGGACATGTCAGTTGAACGGAAGTTGAAGATAGAGGAGgtatgtgatgatgatgatgatgatgatgaggtggaggaggaggaggaacaGAATGGTGTAAGCCATGGAAGCCCACATGACTCAGACAACGAAGGGAGCAACTGTGGATCAGTGACACGCAGTCCAGATGATGAGGCATCAAGGGAGCGGAGAGCAGATGCTCGGTCAAGCTCAGATGAGGGTCATGATATTGGAAACAGACCTGTCGGAGAAGCCAGCAATCTTCTGCGAACTCTCATATCATGTCGGAAGTTAGGGATTACACCAACAGAAGCAGCAGCAAACAACCACATTGTTCCTATTGGTACTTCGCTCCAGCATTCATTAAAGTCGCGCAGTAAACTGTATTCTGCTATTCAGATATCATCACTTGCCTCCGAAACAAATGCGGAATCCCACTCAGCAGCTGTTCTAGGAAATCGAACTAATCTTCCTTCAACTGAAGAAATGCCATCAGCGTTTACAATAACAATGAAGTCAATGGAGAGAAGTGCAAGAGCAAACATGGCTCTTGTAGCCGTGAGTAAACAGGATGGTAACAGGAGGAAGCAAAGCTGTCCATCAAAATCAGATGCTTCGGTGATAAGAAGAAGCCCTGTTTCTCCGTATGTGCGTGGGGAAACTTTTCTACCAGATTTCACTGGTAACAATCCTTGGTGTAACATCTCTACTGTTAAACCAGGCAGGTTGGCAGCTCGACGCATGGATCTAGCATGCAGTAACTGTGGTACCATGACGACCACAATCTGGAGACGCAACCCAGAGGGTGAGATGGTCTGCAATGCGTGTGGGCTCTACTACAAACTTCACGGTGTTAACCGACCGGTCACAATGCGACGTGACACCATACATACTAGACGTAGACGGCCCAAAGGAGAGAAGGGTAGCGGACGGCATAGGAATAAATCAGGTAACAGTGGCAGCAGTAATGAAGATCCAGTGGATATGTTGGCAGCCTTGCGGAGACAGATTCAACCACACTTAATGCTGGCGCTGCAAGCAGCACCTGAGAGTAGTAAAAGCATCTCGGGTAACCACAGTCACCTTCCTCCTGCAGTCAGCGTACCTTCAGCGTACGCCATGGTGCAGGTGAAAACAGAGCCGATGGAGTCTGCGGGAGAAGAAGAGGATGAAGATGAAAACATGGCTGACTTGCCTCTGAATCTTGTTTCTACAACACTTTCAGAACCATCATCTCAGTGA
- Protein Sequence
- MCNIPPKFYELCRLCLSCDGVKSSIFDDEGTQRNFPLKIMTCLSILVSERDLLPPSICHRCVYKLDVLYDFREVSRKSDVILKQYLSYPGHLANTTQVSVKKETENLVDCSIKKADQNGVQDETTSASPCSERSIDKEAQEMVAALELRIKEEPLDEEEVQEEEGEEDRAEGGEGICDGGLHMNGGSYRVISGKGMKLEDESSEHIERENVLLDQGLDMSVERKLKIEEVCDDDDDDDEVEEEEEQNGVSHGSPHDSDNEGSNCGSVTRSPDDEASRERRADARSSSDEGHDIGNRPVGEASNLLRTLISCRKLGITPTEAAANNHIVPIGTSLQHSLKSRSKLYSAIQISSLASETNAESHSAAVLGNRTNLPSTEEMPSAFTITMKSMERSARANMALVAVSKQDGNRRKQSCPSKSDASVIRRSPVSPYVRGETFLPDFTGNNPWCNISTVKPGRLAARRMDLACSNCGTMTTTIWRRNPEGEMVCNACGLYYKLHGVNRPVTMRRDTIHTRRRRPKGEKGSGRHRNKSGNSGSSNEDPVDMLAALRRQIQPHLMLALQAAPESSKSISGNHSHLPPAVSVPSAYAMVQVKTEPMESAGEEEDEDENMADLPLNLVSTTLSEPSSQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00370641;
- 90% Identity
- -
- 80% Identity
- -