Cfor009244.1
Basic Information
- Insect
- Coptotermes formosanus
- Gene Symbol
- pnr
- Assembly
- GCA_013340265.1
- Location
- BLKM01000192.1:79873-111412[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7 1.2e+04 -6.9 4.2 21 26 13 18 11 18 0.80 2 2 1.9e-18 3.5e-15 54.8 3.7 1 35 451 484 451 485 0.98
Sequence Information
- Coding Sequence
- ATGTGTAACATACCGCcgaaattttatgaactttgtCGTCTTTGTTTATCGTGTGATGGTGTGAAATCGTCTATTTTCGATGACGAAGGAACTCAGCGTAACTTTCCACTTAAAATAATGACGTGTCTGTCTATATTGGTTTCCGACAGGGATCTTCTGCCATCATCAATATGTCATCGATGTGTGTACAAGTTGGATGTATTATATGACTTCAAGGAAGTATCAAGAAAATCAGATGTCATCTTAAAGCAATACTTAAGCTACACAGAGCATTTAGCCAGTAGACAACAGGCACCAATgaagaaagggactgaaaatttcatggactgtaacattaaaaaggcTGAGCAGAATGGTGTTCAAGATGAGAGAACATTATCGCCATTCAGTGAGAGGAGCATGGATAAAGAGGCACAGGAGATGGTTGCTGCTTTAGAAATGCGGATCAAGGAGGAGCCagaagatgaggaggaggaagaagacagGATAGCAGGAGAAGAAGACATGTGTGATGGTAGCCTGCATATGAATGGTGAATCTCACAAATTTAAATCAGATGACAGAATTGAACTGGGTAACAAGTCATCAGAATGTGGAGGACGGGAAAAAATGGATCATGATCAAGGACTGGATATGTCAGTTGAACGGAAGTTGAAGGTTGAGGAAGCACTAGGGGAGGAGAAACAGAATGGGACAAGCCATGGAAGTCCTCACGAGTCAGACAATGAAGAGAGTAACTGTGAATCAACAGCCTGCAGCGCAGATGATGAGACAGCGGGGAGGTGGAGGGCAGATGTCCGGTTCAGCTCAGATGAGTGTCATGATGTTGGAAGCAGACCTGTTGGAGAAGCCAGCAATCTTCTAAGAACATTAATTTCCTGTCGGAAGTTAGGGATTACACCatcagaagcagcagcaaacaacCGTGTTGTTCCTATTGGTACTTCACTCCAACATTCATTAAAATCCCGTAGTAAACTGTATTCCACTAATCAGGGCTCCCCAGTTGTCCCCGAAACAACTGCGGAATCCCACTCAGCAGCTGTTCTAGGAAATCGAACTAATCTTCCTTCAGCCGAGGAGATGCCTTCAGCATTTACACTAGCAATGAAGTCAATGGAAAAAGCTGCAAAGGCAAATATGACTCTGGTAGCAGTGAGTAAACAGGACAATAACAGGAGGAAGCAAAGCTGTCCATCAAAAGCAGATGCTTCAGCAATAAGAAGAAGCCCTGTTTCTCCATATGTTCATGGAGAGACCTATCTGCCGGACTTCACTGGCAACAATCCTTGGTGTAACATCTCCGCTGTTAAGACAGGAAGGTTGGCAGCTCGCCGCATGGACCTAGCATGCAGTAACTGTGGTACCATGACCACCACAATCTGGAGACGCAACCCAGAGGGTGAGATGGTCTGCAATGCCTGTGGGCTCTACTATAAACTTCATGGTGTTAACCGACCTGTTACAATGCGGCGTGACACCATACACACCAGACGCAGGCGGCCTAAAGGAGAAAAGGGCAGTGGACGGCATAGGAACAAATCAGGTAATAGTGGGAGCAGTAATGAAGATCCAGTGGATATGTTGGCTGCGCTTCGGAGACAGATTCAGCCTCATCTCATGCTGGCTCTGCAAGCAACTCCTGAAAGCAGTAAAAGTATCTCCTTGTCCACATCAGGCAACCACAATCACCTGTCTCAAGTAGTCAGTGTACCTTCAGCATATGCCATGGTGCAGGTGAAGGCAGAACCTATGGAGTCTGCAggtgaagaagatgaagatgaagatgaagatgagaatATGGCTGACTTGCCTCTGAATCTTGTTTCTACAACACTCTCAGAACCATCATCTCAGTGA
- Protein Sequence
- MCNIPPKFYELCRLCLSCDGVKSSIFDDEGTQRNFPLKIMTCLSILVSDRDLLPSSICHRCVYKLDVLYDFKEVSRKSDVILKQYLSYTEHLASRQQAPMKKGTENFMDCNIKKAEQNGVQDERTLSPFSERSMDKEAQEMVAALEMRIKEEPEDEEEEEDRIAGEEDMCDGSLHMNGESHKFKSDDRIELGNKSSECGGREKMDHDQGLDMSVERKLKVEEALGEEKQNGTSHGSPHESDNEESNCESTACSADDETAGRWRADVRFSSDECHDVGSRPVGEASNLLRTLISCRKLGITPSEAAANNRVVPIGTSLQHSLKSRSKLYSTNQGSPVVPETTAESHSAAVLGNRTNLPSAEEMPSAFTLAMKSMEKAAKANMTLVAVSKQDNNRRKQSCPSKADASAIRRSPVSPYVHGETYLPDFTGNNPWCNISAVKTGRLAARRMDLACSNCGTMTTTIWRRNPEGEMVCNACGLYYKLHGVNRPVTMRRDTIHTRRRRPKGEKGSGRHRNKSGNSGSSNEDPVDMLAALRRQIQPHLMLALQATPESSKSISLSTSGNHNHLSQVVSVPSAYAMVQVKAEPMESAGEEDEDEDEDENMADLPLNLVSTTLSEPSSQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01567499; iTF_00396946;
- 90% Identity
- -
- 80% Identity
- -