Basic Information

Insect: Zootermopsis nevadensis
Gene Symbol: -
Assembly: GCA_000696155.1
Location: NW:281909-298688[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3.9 1.4e+02 2.6 0.3 3 12 499 508 498 517 0.84

2 15 6.4 2.3e+02 1.9 5.0 1 19 525 543 525 547 0.90

3 15 0.0051 0.18 11.7 0.7 2 19 563 580 562 582 0.92

4 15 0.00014 0.0049 16.7 0.7 1 23 589 611 589 611 0.97

5 15 6.3e-06 0.00023 20.8 0.5 2 23 618 640 617 640 0.95

6 15 4.9e-05 0.0018 18.1 1.3 1 23 646 668 646 668 0.98

7 15 0.00083 0.03 14.2 0.1 1 23 674 696 674 696 0.97

8 15 2e-05 0.00072 19.3 3.3 1 23 702 724 702 724 0.97

9 15 6.9e-05 0.0025 17.6 1.8 1 23 776 798 776 798 0.95

10 15 0.00034 0.012 15.4 3.6 3 23 806 826 804 826 0.98

11 15 7.1e-06 0.00026 20.7 1.0 3 23 834 854 832 854 0.98

12 15 0.013 0.46 10.4 0.5 1 23 860 882 860 882 0.97

13 15 3.4e-05 0.0012 18.5 2.3 1 20 888 907 888 910 0.94

14 15 6.5e-08 2.3e-06 27.1 0.2 1 23 916 938 916 938 0.98

15 15 9e-05 0.0032 17.2 3.9 1 23 944 966 944 966 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3.9	1.4e+02	2.6	0.3	3	12	499	508	498	517	0.84
2	15	6.4	2.3e+02	1.9	5.0	1	19	525	543	525	547	0.90
3	15	0.0051	0.18	11.7	0.7	2	19	563	580	562	582	0.92
4	15	0.00014	0.0049	16.7	0.7	1	23	589	611	589	611	0.97
5	15	6.3e-06	0.00023	20.8	0.5	2	23	618	640	617	640	0.95
6	15	4.9e-05	0.0018	18.1	1.3	1	23	646	668	646	668	0.98
7	15	0.00083	0.03	14.2	0.1	1	23	674	696	674	696	0.97
8	15	2e-05	0.00072	19.3	3.3	1	23	702	724	702	724	0.97
9	15	6.9e-05	0.0025	17.6	1.8	1	23	776	798	776	798	0.95
10	15	0.00034	0.012	15.4	3.6	3	23	806	826	804	826	0.98
11	15	7.1e-06	0.00026	20.7	1.0	3	23	834	854	832	854	0.98
12	15	0.013	0.46	10.4	0.5	1	23	860	882	860	882	0.97
13	15	3.4e-05	0.0012	18.5	2.3	1	20	888	907	888	910	0.94
14	15	6.5e-08	2.3e-06	27.1	0.2	1	23	916	938	916	938	0.98
15	15	9e-05	0.0032	17.2	3.9	1	23	944	966	944	966	0.95

Sequence Information

Coding Sequence: ATGAAGATAGTATTAAAAAATGTGAGTGGTGAAAGCATCACAATTGATGTCAAGCCTGATGATACTTTCTATGACCTAAAgacaagaattcaaaatgaatCAGGCATTCAGCTTGATCTTCAGcaattgaattttaaagggaAGAAAATAACAGATGACCAAATCgttgcagaatatttttttgaCGaTATTGGTGCTGCTGAAGAAAATGGaccaaaatatgaagatgaagatgCTAGTGTTGTGCAGTCATTGCAGTGTGCTGTACCTGGATGCAATAATGTTGAGGCCTCATgtccaaataaaagttttttccATTTTCCAGTTTCTGAGGACAGGTGCCGGCATTGGCTGTTGGTTTGTAGACGGCTTGACTTATTGGATAAGCCATGTGCCTTAGTGAGTCAGCATTATGTTACATGTTCTGATCATTTCATAGCCAGTGAGTTTGTTGATGATACTAAACAAAGACTGAAAAAGAGAGCTATTCCAACATTATTTGACTTCAGTAGTCAGAATGGTGTTCCTATAGAAATAATAGATGGCGATCAAATCATCGTAGAAGAAAACTGTGAAGTAGTGATCAAGCAAGAACGAGGATCGATGCCACAGGTTGAAATTGATTATGACAGTGACCTTGAAGGGGTGGTTGAAGAATTAGTACCAGAACTTCCAGGCCAACTCTGCCGACTCTGTGCATCTGCTATTAAGGAAGTAGTGTACATTTTCAGTGCCACTGGGAAGGAACAACATATTGCtgagaaaattaatacatgTTTACCTGTAACGGTTAAAAGTACAGATCCGCTGCCAAAACAACTGTGTACAACTTGCATCAACAAGTTGAACATGTGTCACGAATTTGCTGAATCTTGCATTCAGGCAGAAAATAAACTGCTTGAATTGAATGAAAGGAAGCACTTCAGGTCACGTGCTGTATATAACATGGAAGACAGTAAAGCAGATGTTGCTATTATAGCCATCAAATCTGAACATGAGCTTGAAAATGCTGGTAAAGGTCAACTGAATGGTATAGACAGCAGCTTTGTCAGTGGAAGTGTGACATATTGCACAAGAACAAAACAGGGATCAGCCATTAATGGTATTCAGGAAGCTAGTTGTATCGAGGAAATCTATAGAGCACAAAGTTCTTTTTTCTGTCCTCTTTGTTGCGATGGCAATATGTCAATTCAAAGTGACACACCTGAAGGTTGTGGAAATGGTGATTTGGCATTATTAAAGGAGATTGGggcaaaaatatataagaaaaaccATGTGCATCACTCAGAAGAATTTAATACTGTTCATgacatattaatacaaaatgctgAAACCAGTGAGGACAGTAGTAATATATGGGATGAGAGTGGGCCAATGGATAATGTTACTTTGGGAAATATTTCAcaagaagacaaaattataagcaaagataaaatatatggtGTGGTAGACGGAACTGTAACCTTATTGCACCCAAAGATAGAATTTCCCAGCTGCCGTCTTTGTGGCGAGACATTCGCGGACATAGATCTCTGTTTGGACCATGCCAAGTGTCACGTGGAGTCAGATCTTTACCCTTGTAGTCTCTGTGAGTTGTGTTTCACAAGTGAATTATGCCTGGTAAGTCACTGTGAGGAACACAAAGCGGAAGAGAGGCAGTTACGACCCAAAGGCTCCAAGCGTCTGGTCTGTCCCACATGTGGGAGAAGGTTCAACAATTCCAGGACATTGGCTGGACATAATTGTTTCAGTGCAACACGACCTTTCAAGTGTCCAGAATGTGGTAAATTTTTCCGCACCGAGGCCAGACTCGAATTTCATCAGCAGGTCCATGAAGGTGGTAGTCCTGTGGTTTGTGAGCACTGTGGTAAGGAATTCAGTAGAGAAAACAATCTTTTCGATCATGTGCGTTTGGTGCACATGGGTGAGAAAGCACATAGATGTGAACAGTGTGGGAAATCCTTCCAGCTGAAGGCACGTCTCATTGCCCATCAACGTGTACATACCGGTGAACGTCCctttgtttgtgatatttgtggAGGAAAATTCTATGACAATGCCACACTTAAGGGCCATCGAGTCACACACATGGATGTGAAACCTTTTCAGTGCGATAAATGTGGGCGTTGTTTTGCTCGCAAGACGTTATTTAAACAACATGTTATGGCACATGTAGATGAGAACAAACAGCCCAGAATGTACAGTTGCAAGTTGTGCATGGATGCTGTCTTCCCTACTTATGCCAAACTTGTTGAGCACAGGAAAGATTCACATCCTTTAGTTAAAGCTTTTGAGGATGATGCAACTCCACACAATACAAAACCATTTAAGTGTGAGGACTGTGGAAAGTCATTTGCATATCGTGTAACTTTAGTGGCACATTGTAGGAATCATACTGGAGAGTTGCCGTTTGGCTGCGATTTCTGCGAAAAAAGATTTTCTCAAAAACGTTCCTTAGTGCTGCATCATCGTACACATACAGGGGAGAAGCCATTTGGTTGTGACATATGTGGTAAGCGGTTTGTTCAGAGTGCCCACCTGTACTCACATCTTCGTTTACACACAGGTGAAAAACCCTACCAGTGTGAAGTATGTGGTAATCGCTTCAGACTAAAAGATGTGCGTGATGCTCACCTCCGTAAACACACCGGCGAACGCCCTTTTAAATGCAATGTATGTGGAAAAGCATTCAGAACGAGTCATTCTTATTATCAACACATGTGGATCCACCAAGGCAAAAAGCCATACCCCTGTGAATATTGTGGAAAAGCATTCCGTAGGTCAAATGGGCTTAAAATTCATATCCGAATTCATACAGGTGAAAAACCACATGCCTGTGATATATGTGGTCGTTGCTTTGCACAGAAGCAAGATATGAAAAAACATAGAAACTTGCATGTTGCAGGGAAATTGTAA
Protein Sequence: MKIVLKNVSGESITIDVKPDDTFYDLKTRIQNESGIQLDLQQLNFKGKKITDDQIVAEYFFDDIGAAEENGPKYEDEDASVVQSLQCAVPGCNNVEASCPNKSFFHFPVSEDRCRHWLLVCRRLDLLDKPCALVSQHYVTCSDHFIASEFVDDTKQRLKKRAIPTLFDFSSQNGVPIEIIDGDQIIVEENCEVVIKQERGSMPQVEIDYDSDLEGVVEELVPELPGQLCRLCASAIKEVVYIFSATGKEQHIAEKINTCLPVTVKSTDPLPKQLCTTCINKLNMCHEFAESCIQAENKLLELNERKHFRSRAVYNMEDSKADVAIIAIKSEHELENAGKGQLNGIDSSFVSGSVTYCTRTKQGSAINGIQEASCIEEIYRAQSSFFCPLCCDGNMSIQSDTPEGCGNGDLALLKEIGAKIYKKNHVHHSEEFNTVHDILIQNAETSEDSSNIWDESGPMDNVTLGNISQEDKIISKDKIYGVVDGTVTLLHPKIEFPSCRLCGETFADIDLCLDHAKCHVESDLYPCSLCELCFTSELCLVSHCEEHKAEERQLRPKGSKRLVCPTCGRRFNNSRTLAGHNCFSATRPFKCPECGKFFRTEARLEFHQQVHEGGSPVVCEHCGKEFSRENNLFDHVRLVHMGEKAHRCEQCGKSFQLKARLIAHQRVHTGERPFVCDICGGKFYDNATLKGHRVTHMDVKPFQCDKCGRCFARKTLFKQHVMAHVDENKQPRMYSCKLCMDAVFPTYAKLVEHRKDSHPLVKAFEDDATPHNTKPFKCEDCGKSFAYRVTLVAHCRNHTGELPFGCDFCEKRFSQKRSLVLHHRTHTGEKPFGCDICGKRFVQSAHLYSHLRLHTGEKPYQCEVCGNRFRLKDVRDAHLRKHTGERPFKCNVCGKAFRTSHSYYQHMWIHQGKKPYPCEYCGKAFRRSNGLKIHIRIHTGEKPHACDICGRCFAQKQDMKKHRNLHVAGKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00370391;
90% Identity: iTF_01567023;
80% Identity: iTF_01567023;