Znev007060.1
Basic Information
- Insect
- Zootermopsis nevadensis
- Gene Symbol
- LZTR1
- Assembly
- GCA_000696155.1
- Location
- NW:93278-104031[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.3e-13 2.7e-11 43.0 0.2 2 107 362 496 361 499 0.85 2 4 0.042 5 6.7 0.2 69 108 491 529 490 531 0.85 3 4 4.6e-21 5.4e-19 67.8 0.1 8 97 590 679 584 693 0.87 4 4 0.42 50 3.5 0.1 76 100 692 716 682 725 0.82
Sequence Information
- Coding Sequence
- ATGGCAATTGCTCAGCCTGTAAATATGGATTTTCATCATTCTTGGCCAGAGAGTGCAGAATGCCTTACCCTGGATTTTGGACCATTTGAAACTGTTCATCGATGGAAAAGAATGCCAGAATGTGATGAATTTGTGGGGGCCAGGAGGAGTAAACATACAGTTGTGGCATATGAAGATGCAATCTACGTTTTTGGAGGAGATAATGGGAAGAGCATGTTGAATGACTTGCTTCGATTCGACGTGAAAGAAATGTCATGGGGCCGAGCCTTTGTCACAGGAACGCCACCTGCTCCAAGATACCATCACTCAGCTGTTgttCATGGTACGTCCATGTTTGTATTTGGCGGTTATACGGGTGACATCCACTCCAATTCAAATCTGACCAACAAGAATGATTTGCTGGAGTATAAGTTTCAAAATGGACAGTGGATTGAGTGGAAATTCATTGGCAGGACCCCTGTGCCCCGTTCGGCGCATGGCGCTGCTGTTTATGATGGCAAGCTTTGGATATTCGCAGGTTATGATGGCAACGCCAGACTTAACGATATGTGGACCATCTCATTGCTGGGAGACTCCAAGTCTTGGGAAGAGGTGGTACAGGCCGGGGATTGCCCCCCCACTTGCTGCAACTTTCCTGTAGCGGTGGCTCGAGAATCCATGTTTGTGTTCAGTGGACAAAGTGGGGCAAAGATAACGAACAGCTTGTTCCAGTTTCACTTCAAAGATAAGTGTTGGACACGAATATCAACAGAACACATCCTGCGTGGTGCCCCGCCCCCTCCTGCACGTCGCTATGGCCACACGATGGTGGCATTTGATCGCCACTTGTATGTGTTTGGAGGAGCAGCCGACAGCACTCTGCCAAATGACCTTCATTGCTATGACCTTGACACACAGACCTGGTCTGTCGTGACTCCGTGTCATGACTCACAGGTTCCTTCTGGACGGCTGTTCCATGCTGCGGCTGTCATAGGGGAGGCCATGTACATATTTGGGGGCACTGTGGATAACAATGTCCGCAGCGGGGAGATGTACAGATTCCAGTTCTCGTGCTACCCCAAATGCACATTGCATGATGACCTGGGCAAGCTGCTGGAGGGGCGTCAGTTCTGTGACGTGGAGTTTGTGGTGGGTGTTGAGGAGGTTAAGATTCCTGCGCATCTTGCTATGATAGCTGCACGGTCACAGTTCCTGCGCAGTCGTATAAGACAGGCGCGTGAGGCCAGAGACAAGCATCTTGAAAAGTTGTTTGGGACAACTGAAGTACCATTCAAGGATCTGCCCCTTCTTGAAGTACGGCTTCGTGATGCTGTCCCCGAAGCCTTCGACATGGTGTTGAACTACATATACACAGACCGCATTGACCCTACCCAGAAGACCGAAGACTCGATGAGTAATCGCATTGTGCTGCTCATGATGGACGTGTACAGACTCGCTGTGCAGTTCCACATGCGCCGGCTGGAGCAGTTGTGCGTGCTCTATCTGGAGGCCACGATCAATCACCGCAATGTGTTGGAGGCTCTTCACAATGCATCGCACCTTCAATTGTACTTCATCAAAGAGTTCTGTTTGAAGTTCATTGTGAAGGAGACAAATTACAATCAGATTGTGATGAGCAAGGAGTTTGAGACCCTTGAGCAACCCCTGATGGTCGAGATCATTCGACGACAACAGATGCCACAGATACGCTCCCTGCCAGAGCCTCAGTTTGACAGCACAGGCACAACACTTGAGCAGGATATGGAGGCGTTCTTGAACAGTGTCGGCAAGGAATTCAGCGACATCACTCTCATGGTTGATGGGCATCCCATCCCATCACACAAGGCTGTGCTGGCTGCGCGTTGCAGCTACTTTGAGGCCATGTTCCGTTCCTTCATGCCCGAAGACAACGTGGTGAATATCCAGATTGAGGAGATGATTCCATCACTGCAGTCATTTGATTCGCTTCTGCGCTACATATACTATGCCGCTGTGAACATGCCGCCCGAGGACTCGCTGTACCTCTTCAGCGTATCGCACTACTATGGTTTCACTAACAACCGTCTGCAGGCGTTCTGCAAGCAGAACCTTGAGATGAACGTGACGTTCGAAAATGTGATGCAGATCCTGGAGGCTGCCGACAGGATGCAGGCCACGGACATGAAGAAATACTCGCTGAACCTCATTGTTCACCACTTCCCAAAGGTCGCTCGCTTGCCAAAGTTCCAGACGTTAAGCCGAGAGCTACTGCTTGAAATTCTGGCTGCCCTGGCAGAAGAAATGAGCGATTCAAAGCTCTGTCAAGACATGTCAAGTACCAGCCTCAGCAGCGAGAGCTGA
- Protein Sequence
- MAIAQPVNMDFHHSWPESAECLTLDFGPFETVHRWKRMPECDEFVGARRSKHTVVAYEDAIYVFGGDNGKSMLNDLLRFDVKEMSWGRAFVTGTPPAPRYHHSAVVHGTSMFVFGGYTGDIHSNSNLTNKNDLLEYKFQNGQWIEWKFIGRTPVPRSAHGAAVYDGKLWIFAGYDGNARLNDMWTISLLGDSKSWEEVVQAGDCPPTCCNFPVAVARESMFVFSGQSGAKITNSLFQFHFKDKCWTRISTEHILRGAPPPPARRYGHTMVAFDRHLYVFGGAADSTLPNDLHCYDLDTQTWSVVTPCHDSQVPSGRLFHAAAVIGEAMYIFGGTVDNNVRSGEMYRFQFSCYPKCTLHDDLGKLLEGRQFCDVEFVVGVEEVKIPAHLAMIAARSQFLRSRIRQAREARDKHLEKLFGTTEVPFKDLPLLEVRLRDAVPEAFDMVLNYIYTDRIDPTQKTEDSMSNRIVLLMMDVYRLAVQFHMRRLEQLCVLYLEATINHRNVLEALHNASHLQLYFIKEFCLKFIVKETNYNQIVMSKEFETLEQPLMVEIIRRQQMPQIRSLPEPQFDSTGTTLEQDMEAFLNSVGKEFSDITLMVDGHPIPSHKAVLAARCSYFEAMFRSFMPEDNVVNIQIEEMIPSLQSFDSLLRYIYYAAVNMPPEDSLYLFSVSHYYGFTNNRLQAFCKQNLEMNVTFENVMQILEAADRMQATDMKKYSLNLIVHHFPKVARLPKFQTLSRELLLEILAALAEEMSDSKLCQDMSSTSLSSES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00087267;
- 90% Identity
- iTF_00209894;
- 80% Identity
- -