Zimm008927.1
Basic Information
- Insect
- Zonitis immaculata
- Gene Symbol
- SCRT1
- Assembly
- GCA_037414775.1
- Location
- JAZBGX010003234.1:1747-4703[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.00021 0.38 10.5 0.8 13 38 289 311 283 316 0.85 2 5 0.017 32 4.4 0.5 17 28 324 335 314 350 0.78 3 5 0.0027 4.9 7.0 0.2 17 28 350 361 338 373 0.81 4 5 0.00013 0.23 11.2 0.3 19 41 380 399 368 401 0.88 5 5 0.017 32 4.4 1.6 14 43 403 429 399 430 0.88
Sequence Information
- Coding Sequence
- ATGCCGCGCTGTCTTATGGCGAAAAAGTGGAAAGCTTATCCATGGCCGGAACGGCCTGAACTAACATCAACACAACATGATGACGAAGATGAGGAAATTGATGTTGTTGGAGATGCACCATCATGTTGGGGCCCGTCTAGTCCTACTGCCGGTGCTACAGCACCCAGTCCACCGCCGACATCGCCAAATGGAACCACACTCATCTACAACGGTTATCTACATGAACTATCACCTTCAAGCTACACTACAACATCTTCATTTATTCCCCGCAATGATTCATCATCTTTAACTGGCCAAAATCAGCCATCTTATGCTACATTAAGGACGGTTGTTGAGACGCAAGATCTTCGTACCGAATATGGCACGCCtacgtcatcatcatcagcaatTCCAACTACTACACCATTACGTACAAATAAAAAGTCTTTATCGATGACATTAAGTTGTGGTGCAACTTTATCATTACCGCCTAAAAAGAAAGATATCTACCGTCCATATTCATTGGATGATAAGCCAGTTGCAACTCCAATTCGAATACCAGCTGAAGAAGATCTACATGCAGCCCATGCAATTTTAGATTTGAGTACGTCAACGACTGTTTTCTTATCACCACCGCCGCcacctccaccaccaccaccacctccgccaccaccaccaccacctgtGTCTATTGagaataatcaacaacaacaacaacaacaaattgaaattgaggAGAATTTGAATTCGACTCAATTATCAGCGAAATCAGGCAAAACAATCGCTTATACATATGAAGCGTTTTTTGTTAGTGATGGCCGATCGAAGAAACGCTATCCAAATGAGGAAACAACCGGTATAATAGcaacaaaaccaacaacaactgaaAAACCGAAATATACATGTAGCGAATGCGGTAAACAATACGCTACATCGAGTAATTTATCAAGACATAAACAAACACATCGCAGTTTGGATTCACAATCGGCAAAAAAATGCATGACATGCGGTAAGGCATATGTTAGTATGCCAGCTTTGGCTATGCATGTATTAACACATAAATTAGCACATCGTTGTGGTGTATGTGGTAAACAATTTTCACGACCATGGCTATTGCAAGGCCATCTACGTTCACATACTGGTGAGAAACCATATGGTTGTGCCCATTGTGGTAAAGCATTTGCTGATCGTTCGAATTTACGTGCTCATATGCAGACCCATTCGGCtgataaaaatttcgaatgtCCACGTTGTCATAAAACGTTTGCATTAAAATCGTATCTTAATAAACATTTAGAATCGGCTTGTTTGAAagaagataataataacaataataataataatagtggggCAGTGTCGAGTTGTGGTGAAGAGTTAACTGATCGTGGAACTGTTGAAGATGTCTCAGTGCCCATTCGTGTTTATGCTGGATGA
- Protein Sequence
- MPRCLMAKKWKAYPWPERPELTSTQHDDEDEEIDVVGDAPSCWGPSSPTAGATAPSPPPTSPNGTTLIYNGYLHELSPSSYTTTSSFIPRNDSSSLTGQNQPSYATLRTVVETQDLRTEYGTPTSSSSAIPTTTPLRTNKKSLSMTLSCGATLSLPPKKKDIYRPYSLDDKPVATPIRIPAEEDLHAAHAILDLSTSTTVFLSPPPPPPPPPPPPPPPPPPVSIENNQQQQQQQIEIEENLNSTQLSAKSGKTIAYTYEAFFVSDGRSKKRYPNEETTGIIATKPTTTEKPKYTCSECGKQYATSSNLSRHKQTHRSLDSQSAKKCMTCGKAYVSMPALAMHVLTHKLAHRCGVCGKQFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSADKNFECPRCHKTFALKSYLNKHLESACLKEDNNNNNNNNSGAVSSCGEELTDRGTVEDVSVPIRVYAG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00842005;
- 90% Identity
- iTF_01566507;
- 80% Identity
- iTF_01566507;