Basic Information

Insect: Iselma pallidipennis
Gene Symbol: SCRT1
Assembly: GCA_037464855.1
Location: JAZBHA010001536.1:10228-13430[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.00047 0.6 9.8 0.8 16 38 285 304 278 309 0.88

2 5 0.023 30 4.4 0.6 17 28 317 328 306 343 0.78

3 5 0.0037 4.8 7.0 0.2 17 28 343 354 334 367 0.80

4 5 0.00017 0.21 11.3 0.3 19 41 373 392 361 394 0.88

5 5 0.024 30 4.4 1.5 14 43 396 422 393 423 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.00047	0.6	9.8	0.8	16	38	285	304	278	309	0.88
2	5	0.023	30	4.4	0.6	17	28	317	328	306	343	0.78
3	5	0.0037	4.8	7.0	0.2	17	28	343	354	334	367	0.80
4	5	0.00017	0.21	11.3	0.3	19	41	373	392	361	394	0.88
5	5	0.024	30	4.4	1.5	14	43	396	422	393	423	0.88

Sequence Information

Coding Sequence: ATGCCGCGCTGTCTCATGGCCAAGAAGTGGAAAGCTTATCCATGGCCTGAAAGGCCTGATCCAccagaagatgaagatgaggaAATCGACGTTGTTGGAGATGCACCGTCTTGTTGGGGACCGTCAAGTCCTACCGCCGGCGCCACAGCGCCCAGTCCACCGCCGACATCACCAAATGGAACCACACTCATATATAACGGATATCTTCATGAACTGTCACCTTCAAGCTATACTACTTCATCATTTATTCCGCGCAATGAACAATCCATCACCGGTCAATCTCAACCATCTTATGCTACCTTAAGGACGGTTGTGGAAACACAAGACCTTCGTACTGAATATGGAACACCAACACCAGTTCCTGCACCACCACCTCGTACGAATAAGAAATCATTATCTATGACTTTAACTAGTACTGGTGCAGCTTTATCTTTACCACCGAAGAAGAAAGACATTTATAGACCGTATTCGTTAGACGATAAGCCAATAATACCGCCAATTCAACCAACAACACTTCGTGTGCCCGCTGAGGAAGATCTTCATGCTGCACACGCAATTCTTGATTTGAGTACATCAACGACGGTTTtcttatcaccaccaccacctccaccaccaccaccgccaccccCACCAGTACCAGTACCGACTCATATGCCACCGACAGTTATAGAGAATAACATACAAGAACCGGAAGAAAATTTGAATCCATCTGTGGTTTCAGTGAAATCTGGCAAAACGATCGCTTATACGTATGAGGCATTCTTTGTAAGTGATGGTAGATCGAAAAAACGTTTTACTCCAGACGATGCAACAGGAGGATTAGCAGCTAAAGCTACAGTGAACGAGAAGCCGAAATATACGTGTAGCGAATGCGGAAAGCAGTATGCTACATCAAGCAACTTATCAAGACACAAACAAACACATCGTAGCCTAGATTCACAGTCAGCGAAAAAGTGTATGACTTGTGGTAAAGCATATGTTAGTATGCCCGCATTGGCAATGCATGTCTTAACACATAAATTAGCACATCGTTGCGGAGTCTGTGGTAAACAGTTTTCACGGCCTTGGTTATTACAAGGCCACTTACGTTCTCATACAGGTGAGAAGCCTTACGGTTGTGCTCATTGCGGTAAAGCATTTGCTGATAGATCGAATCTTCGAGCGCACATGCAAACACATTCGgctgataaaaattttgaatgtcCACGATGCCATAAGACGTTTGCATTGaaatcatatttaaataaacatctaGAATCGGCATGTTTGAAagaagagaataataataccaGTAACATTGGAGTTGGGGCTGTGACAAGTTGCGCTGAAGAAATTGCAAATCGGGGAACTGTCGGAGATGTCACAGTGCCCATTCGTGTTTACGCTGGATGA
Protein Sequence: MPRCLMAKKWKAYPWPERPDPPEDEDEEIDVVGDAPSCWGPSSPTAGATAPSPPPTSPNGTTLIYNGYLHELSPSSYTTSSFIPRNEQSITGQSQPSYATLRTVVETQDLRTEYGTPTPVPAPPPRTNKKSLSMTLTSTGAALSLPPKKKDIYRPYSLDDKPIIPPIQPTTLRVPAEEDLHAAHAILDLSTSTTVFLSPPPPPPPPPPPPPVPVPTHMPPTVIENNIQEPEENLNPSVVSVKSGKTIAYTYEAFFVSDGRSKKRFTPDDATGGLAAKATVNEKPKYTCSECGKQYATSSNLSRHKQTHRSLDSQSAKKCMTCGKAYVSMPALAMHVLTHKLAHRCGVCGKQFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSADKNFECPRCHKTFALKSYLNKHLESACLKEENNNTSNIGVGAVTSCAEEIANRGTVGDVTVPIRVYAG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00842153; iTF_01022491; iTF_01022382; iTF_00929852; iTF_00929740; iTF_00987292; iTF_00987372; iTF_01566399; iTF_01566507;
90% Identity: iTF_00842153;
80% Identity: iTF_00842153;