Basic Information

Gene Symbol
TRERF1
Assembly
GCA_037414775.1
Location
JAZBGX010000552.1:1-17361[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.4e-11 4.9e-08 32.7 0.4 2 46 1167 1211 1166 1211 0.96

Sequence Information

Coding Sequence
GGGAACGAGGCTGTTACAGCCACCTTCGATTTGTTTGATTCGTCAAGCGGCCCGGACCTAACATTGTCCCCACAGACATTCACCAACTCAACTGAGGCCTTTATCAACGACAACTCGAACAGCTTAGGAGTCCCAGCGGACAATGATGCAGttTCAACAACAACCGATGATAAAAAACCTACTAGTAACAATACATCATCGGATATAGTGAAGTTGACAGTGAAAAGAGCACGGCCAAAAGCTGCCTCACCAAATCGACAAGGTCCTCAACAATGTCAGgtGTGTGCTAAAGTCTTTGGTAACGCTTCAGCATTGGCAAAGCACAAACTCACACATAGCGACGAACGCAAATACGTTTGTACAATGTGTGGTAAAGCATTCAAACGTCAAGACCACCTCAATGGCCATATGTTGACACATCGCAATAAAAAACCGTACGAATGTAAAGCAGAAGGTTGTGGAAAAAGTTATTGTGATGCAAGATCATTACGACGACATACAGAAAATCATCATAcagcatcATCAAGTACAACATCATCAACGGCTGCTGTTAATAGTACAACAACAATGTCACCAGCACAGGGGGCGGCATCAGGTGATGCAGCATCACCGCATGGCTCTAGTTGTATTCAATAtgcaccaccaccaacaacatcatcatcaacaacaacaacaacaacaacaagcaatACGAATGGGAAAAGTCAACTGCAACAACTTTTAGCTAGCGAACCGGCAAAGgGCGATAATGGCGGTAATAATGATGGACtgactaaacaacaattagatttAATCCATCAAATTATGGAACAAACCCAACGACAATCGCAATCTACTAATAAAACGACAACAAAACCAACTACGAAAAGTGTTAATAAAACACCAGTTAAAGTACAACGAGTATGGACGTCGACGACGCAACAGACttcatcaaataaaacaagtgGGAGCGTTACGAGTCCGCAGGCGAAAGTAACTACAACAACCCCATCAACATCCCCAGCTGCAAGCTCATCATCTAGTGGCACTgccgccgccgccgccacTTCCACCACCACTTCTAATAAAGCCGAACCGAAGCCAGTTGAATGCAATCTATGccatagaaaatttaaaaatatcccAGCCTTGAATGGTCATATGAGATTGCATGGTGGTTATTTCAAAaagGATGCTGAGAATAAAAAATGCGAGAAAAAAGATGTTAATGGCCCGCCTTTACAGACCGCTTCAGTGAGTGTTCGAGCGCtgattgaagaaaaaatcatcaataaacgGATTACAAACCCACAATCAACAAATAGTACTAGCGACAATGACAATACGAAATCATCAGCACCACCATTGTTCCCATTAACAGTGCATTCCTCAGTCAATTCGAATGATTTAGATACAAAAATTACGTCCTTTGTTGTCCCAGCACCACCCCAACAACCACCTGAAAAAACAAGAAGACATTCCGATGCAGATGCTTTCAATAATACGTCTCGATCAATAGTAACAACGACAACATCAACTTCTAACCAATTATCAACTACACAACAAAAAGCTGAAGCTTTGGCTGATCTCATTTTGAAAAGAGATAAAGTCTCCGTTAAACGTACTACCTCTGATCCTGGACAATCCACATCACAAATCATACAATTCCAATCAAATGACTCATTCACATTAACTGGCGTTACTTACCAATCGGAAGATGGAGGATATTTATCGCCAAGTCTACAAGATGAGGTATTTACACAAGTACAAGATACAATGCTATTACAAGGTGTTGATCCACATCAACTTGCTTCTATACAATTTCAAACTGAAAGTCTTCTACAAGACCAAAACgaacaacaattacaagatATAACATTGGAAGATTATACCAATTTACAGGAGGCCGTTGTACAATCAAGTCATTCTGTGAATCAAGAATTACAAGCGGTTCTCGATTCACCATTACCTGAAAGTCTAGCTGAATTTAGTACATAccattcaacaacaaatctaGATATGCCATCACCATCCTATCAAACCCAATCACCAGCTCAATACACAGAATCACCACATACATCACTGACAGCCCAATCACCATTACAAAGTCCATTAATACGTCACGATTCACCCGGTTTTGCTTATCCAACACCACCTGCCAGTCATGAAGGACAAAGTCCATGCTTCAATCAAAATAGTCTATTACCAATGGTATCACCGAAACAAGAATTCGGTCAAGTAATTGAACGTGGTGTTGATGAACCACCACAAGcatcatcaccattatcaGCTGCATTCTTTACATCAACAATGTCTAGTTCGGCTGCTGTTGAAGAAGCTTTAGAAGAAGTTCTACCGGGTGAAAGTATTCCAAATGATATTTATCCATTAACTAATTCACCAACACCACAATCACCCTTATCAGTTGGATTAACTCCAGTCCCATCGCCATTATCGAATATTGTTAGTACATCAGTACCATCACCacatccaacaacaacattcacaCCATCACCAAATAATGTATCATATCCAATGTCGCCACATTATACGTTACAATCGCAAATGTTGCCAAATTCAGACGATCCATTATTATCGAGTAGTCCGAAAGATTTTGCTACAAgaaagaaatttgaatttaatggaattcCATTGAAAGTGATCAGCAATAATGGAATATTAGATTTGAATAGTTCGAATTTTACTGGAATTCTTGTTGATACAAATGgtgaaattaaattcattcaaaCTGGTGGTAATACATTACAAGCGAAAAATGTTTTCGTAACAAATACATCTTTAATGCCAATGAATTCAGATGATAAAGATCAAAAATACCATAAAGTTCTAAAGACTGTAACAATACCAACGAAACAAATTATAGCAAGGCCTAAAACTAACGATCAGAAAAAGGACGACAGCAACGATGTATTTCTAAGTCCTACAACaatacCAGCAAGTCCGGTAAAGGTTTCTAGAAAACGACCGAGAAATGAACCGTTACAACTTCCCGTTTTccatcaatcaaaattaagaGCCACACGCAGTAAGCCACAAGGATTCGCTCGTTATACACCACAACCAATTCTAAATCCACAACGGCCTAGTACTGGATTATATGCCAATTTGAAACCAAAATCAgATGAAGATTCCGCTAGTTGGAATAGTGATCCAATTCCAGAAAGTGATTCCACACCACATATAAATGTGGGAGCACAATTCCAATGCAATATTCCCCCTTTTACATCACCCCctaatcgaaataattctaaatcaaCGTATGAGGACCTACTATGGGATCCTGGTATCATCAACAATTGCACTGATGATGAAGTTGACATGTACTTGGATTTCGCCTGCTGCGCCGCAGTTCCCGGTGGTGGACGGAATAAGGAATATGCCATGCATTTGTTGCATCTCTGTGGTGGCAATATTCATGATGCAATGCTGAAATTGATGCAACCATCCCCATATCTACCATCCGATCATCATCTATTAGGATATTCATATAGTGAAAGTGAGAAATGGACATTAGCAGAAactgaaaatttccataaagcTTTATTGAAATACGAAAAAGACTTTCATAGTATTTCCAAAGaaattggAACCAAAACAATAAAGCAATGCGTACAATTCTATTATGTTTGGAAAAAAGTCTGTATTGATGAATATCGAAGATTGAAGCATGTACGGGAGCGGAGGAATAATCATTTGAAAGTAATGGAGTCTGATATGGACGATAAACCTTACCCAGATGCCAAATTATTAGGAATTATAGAAAGCGGTTCACCGATGCCAATTCAAGATACAAGAAGTTTTTCTTGTGAATTTCCCGATTGTTCGGCTAGTTTCAATTCACGTGCAGCATTAAATGGCCATATACGTATACATGGTGGTACAGCACGAAATTCACCAACACCATCAAATTTGATAACGGCCAAATGTGCCCCTATAGTAAGTTCATCTGTTTGTCATCCTGATTCAACTGAAGATTATCCATGTAAGATATGCGGGAAGGTGTTCACAAAAATCAAAAGTCGTAGTGCCCATATGAAATCACATCGTCCACCTGATGCAGAATCGATAAAACGACGTGAAAAAGATCAAACTAATATATGTACAAGTTTCGAACTTTCCGTGCCAAGCCCATATAGCACCTAG
Protein Sequence
GNEAVTATFDLFDSSSGPDLTLSPQTFTNSTEAFINDNSNSLGVPADNDAVSTTTDDKKPTSNNTSSDIVKLTVKRARPKAASPNRQGPQQCQVCAKVFGNASALAKHKLTHSDERKYVCTMCGKAFKRQDHLNGHMLTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHTASSSTTSSTAAVNSTTTMSPAQGAASGDAASPHGSSCIQYAPPPTTSSSTTTTTTTSNTNGKSQLQQLLASEPAKGDNGGNNDGLTKQQLDLIHQIMEQTQRQSQSTNKTTTKPTTKSVNKTPVKVQRVWTSTTQQTSSNKTSGSVTSPQAKVTTTTPSTSPAASSSSSGTAAAAATSTTTSNKAEPKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDAENKKCEKKDVNGPPLQTASVSVRALIEEKIINKRITNPQSTNSTSDNDNTKSSAPPLFPLTVHSSVNSNDLDTKITSFVVPAPPQQPPEKTRRHSDADAFNNTSRSIVTTTTSTSNQLSTTQQKAEALADLILKRDKVSVKRTTSDPGQSTSQIIQFQSNDSFTLTGVTYQSEDGGYLSPSLQDEVFTQVQDTMLLQGVDPHQLASIQFQTESLLQDQNEQQLQDITLEDYTNLQEAVVQSSHSVNQELQAVLDSPLPESLAEFSTYHSTTNLDMPSPSYQTQSPAQYTESPHTSLTAQSPLQSPLIRHDSPGFAYPTPPASHEGQSPCFNQNSLLPMVSPKQEFGQVIERGVDEPPQASSPLSAAFFTSTMSSSAAVEEALEEVLPGESIPNDIYPLTNSPTPQSPLSVGLTPVPSPLSNIVSTSVPSPHPTTTFTPSPNNVSYPMSPHYTLQSQMLPNSDDPLLSSSPKDFATRKKFEFNGIPLKVISNNGILDLNSSNFTGILVDTNGEIKFIQTGGNTLQAKNVFVTNTSLMPMNSDDKDQKYHKVLKTVTIPTKQIIARPKTNDQKKDDSNDVFLSPTTIPASPVKVSRKRPRNEPLQLPVFHQSKLRATRSKPQGFARYTPQPILNPQRPSTGLYANLKPKSDEDSASWNSDPIPESDSTPHINVGAQFQCNIPPFTSPPNRNNSKSTYEDLLWDPGIINNCTDDEVDMYLDFACCAAVPGGGRNKEYAMHLLHLCGGNIHDAMLKLMQPSPYLPSDHHLLGYSYSESEKWTLAETENFHKALLKYEKDFHSISKEIGTKTIKQCVQFYYVWKKVCIDEYRRLKHVRERRNNHLKVMESDMDDKPYPDAKLLGIIESGSPMPIQDTRSFSCEFPDCSASFNSRAALNGHIRIHGGTARNSPTPSNLITAKCAPIVSSSVCHPDSTEDYPCKICGKVFTKIKSRSAHMKSHRPPDAESIKRREKDQTNICTSFELSVPSPYST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01480056;
90% Identity
iTF_01566518;
80% Identity
iTF_01566518;