Basic Information

Insect: Zonitis immaculata
Gene Symbol: bab1
Assembly: GCA_037414775.1
Location: JAZBGX010000955.1:10730-15665[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 7.2e-12 9.5e-09 34.5 0.0 1 39 425 464 425 468 0.90

2 4 1.9e-13 2.5e-10 39.6 0.1 1 39 479 517 479 520 0.95

3 4 3.2e-19 4.2e-16 58.1 0.0 1 45 534 579 534 579 0.98

4 4 8.8e-17 1.2e-13 50.3 0.0 1 39 586 625 586 629 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	7.2e-12	9.5e-09	34.5	0.0	1	39	425	464	425	468	0.90
2	4	1.9e-13	2.5e-10	39.6	0.1	1	39	479	517	479	520	0.95
3	4	3.2e-19	4.2e-16	58.1	0.0	1	45	534	579	534	579	0.98
4	4	8.8e-17	1.2e-13	50.3	0.0	1	39	586	625	586	629	0.93

Sequence Information

Coding Sequence: ATGTCTGACCAACATTATTGCCTACGATGGAACAATTACCAAAGTAATATGACATCGGTTTTCCATCAACTATTACAAAATGAAGCTTTCGTCGATGTTACATTAGCATGTAACGACTTATCATTAAAAGCACATAAAGTAGTACTATCAGCGTGTTCATCTTATTTCCAAAagttattgttagaaaatccATGTAAACATCCAACGATTATAATGCCCCAAGATGTCTGCTATGCTGATTTAAAGTTCATCATAGACTTCGTTTACAAAGGAGAAATCGACGTTTCTCAAACTGAATTACAGtCCCTTTTACGAACGGCtgatcaattaaaaatcaaagGCTTATGTGAACCAACTGATGAGAAAGAAAATTCACCAACACCGATTCCACCACAATTTTTTGCTAGAACATTCTCAAGAAAATCACCGAAATGTTTACGTACacaagacaataataataagaaacggaagaaacataataaaaaaccTCAAATTGACAATACCGCAACAACCACAATTaatacaacagcaacaacaacaacaacaataacaaattcagATCGAGAAGATAATGGTAGTGTTGAAAACGGTAGTCATAATAATGATGTCAATGATAGTGATGATAGTAacgatgatgacgatgatgatgatgatgatgacgacgatGAGAATGACAATAGTAGAACATCTTTAAGTACAAAtgaccaacaacaaaaacgtaGTAGAAAAAACAGTGAAACGAGAACGAAAGATCAAGTAAAGCCACTAAACATGAGTAGTCATGGCATTATGACAGGCCAGacAATCTTCTCTCAATTTGGAGTAGATACAGATGATTTCCCACCAGAACCACCAGCACCGTCAGCCATACCAGTTGGTCATGTAGATATGCAAGAACACTCACCAACACGtacattattaacaaatacaaTCCATCGGACTGATTTATcagattctaataataaattttgcgatataaaaaaagaagTCGATGTAAAATTTGAAACGTTACGTTCATCATATGATCAAGATTCATTATTAGAGATGGATTCGCATATGTCTGGACCGGATCATTCAATGGATAGTCATGATGATGAACAAAGTATGCATCAAATGATGGTAACACCAGAACTGATGGGTATTATGCCCGGTGTTTCTAATCGTTTAGATTTAAGTAGTAACGAAGTACCtgcaattataaaaaataatggacATAATGATAATTCCCATCATACGTCGTCTAGATCGCATGGTGGTGGTCCAAAAACATGGACTCAGGAAGATATGGATATGGCCTTAGACGCTTTACGAAACCACAACATGAGTCTAACTAAaGCGTCAGCGACTTACGGTATTCCCTCCACTACCCTTTGGCAACGCGCCCATAGATTAGGTATAGATACACCAAAGAAAGAAGGACCTACGAAATCGTGGACTGaagaaaatctaaataatgcTCTAGAAGCGCTTAGAACTGGAACAATATCCGCTAATAAAGCTAGTAAAGCTTAcgGAATTCCAAGTAgtactttatataaaatagcgaGACGTGAAGGTATCCGATTGGCGGCACCTTTCAATGCCGCCCCAACTACATGGACACCGGAGGATTTAGAAAAAGCTTTAGAATCGATACGTTCCGGTCAAACGTCGGTACAGAAAGCTTCAACTGAATTTGGTATACCAACTGGTACTTTATATGGGCGATGTAAACGTGAAGGTATTGAATTGTCAAGATCAAATCCGACACCATGGTCTGAAGATGCTATGGGTGAAGCTCTAGAAGCTGTtagATTAGGACATATGTCGATTAATCAAGCAGCTATACATTATAATTTACCATATTCATCGTTATATGGTAGATTTAAACGTGGCATTAAATACGAATCGGATAATATCGATGCAAATTCGGATAGTCAATCGCAATTAGATGGACATTCATTTGGCGGTATCGATTATGGTAATAATACAGCAACAcatcaacaaattcaatatcaaaatcAAACGACTAGCTGA
Protein Sequence: MSDQHYCLRWNNYQSNMTSVFHQLLQNEAFVDVTLACNDLSLKAHKVVLSACSSYFQKLLLENPCKHPTIIMPQDVCYADLKFIIDFVYKGEIDVSQTELQSLLRTADQLKIKGLCEPTDEKENSPTPIPPQFFARTFSRKSPKCLRTQDNNNKKRKKHNKKPQIDNTATTTINTTATTTTTITNSDREDNGSVENGSHNNDVNDSDDSNDDDDDDDDDDDDENDNSRTSLSTNDQQQKRSRKNSETRTKDQVKPLNMSSHGIMTGQTIFSQFGVDTDDFPPEPPAPSAIPVGHVDMQEHSPTRTLLTNTIHRTDLSDSNNKFCDIKKEVDVKFETLRSSYDQDSLLEMDSHMSGPDHSMDSHDDEQSMHQMMVTPELMGIMPGVSNRLDLSSNEVPAIIKNNGHNDNSHHTSSRSHGGGPKTWTQEDMDMALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNNALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRSGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGIKYESDNIDANSDSQSQLDGHSFGGIDYGNNTATHQQIQYQNQTTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00841760;
90% Identity: iTF_01366443;
80% Identity: iTF_01566359;