Ztra009537.1
Basic Information
- Insect
- Zhengitettix transpicula
- Gene Symbol
- lrrfip2_1
- Assembly
- GCA_037074705.1
- Location
- CM073590.1:209613232-209627885[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.37 2.1e+04 -3.9 1.1 75 75 64 64 19 106 0.50 2 3 2.6e-112 1.5e-107 361.0 30.7 1 300 129 438 129 438 0.90 3 3 0.005 2.8e+02 2.2 3.7 120 172 436 488 435 495 0.91
Sequence Information
- Coding Sequence
- ATGTCTGCCGATGATACAGACGAAAGCTCCTCCGGCTCTGTAGTCGGAGATGAAGTTTCCGAAGAGGTTGAACAAACTAACACCTCCGTCGACGAAGTGAACGACGGTGAAAGTGCCGAAGGTGCAGGCGAGCCGGGAAAATTAACTGGCCAGGATGCTCGCAACTCGACTGAAAGTGAAATAAGCGATTCTCGGTGCAATAACGGCAGCGAGTCATTAGAGAACAATGACAGTTTCGGGAAAAGTGTTGAAGAAAATGCAAAAAAAGGTAGAATCGAACGCAGTAACAGTGGATCAGTGAGGGAGTCAACGTCGGAAACGGACGACAACGACACTCAACCTGATGACGGAATAATGCATTTTCTCGACAAAAGTAACAATGaagccgAAGCAAGACTAGCTGCCCGAAGACAGGCCAGAGCAGAAGCTCGTGAAATTCGGATGCGAGAACTTGAACGGCAGCAGAAAGAAATCGAAGAGAATGCAGACAAAGTGTATGACATGTATGCAGatACACCACCTAGAGCATCACGTGTGGGAACCAATGTTTCAGCCACTAGGTTGTCTACAGGCACAGGTTCCAATAGTTACCAATCCAGTCGTCGTAGTTCTGAAGATTCCTTGGAAGAAGGGATAAATCTTAGAGATGTTAGGCTTGAGCTTAAAGAATTGGAAGAAAAGTTTAGAAAGGCAATGATTCAAAATGCCCAACTGGATAATGAAAAATCATCACTAACTTATCAAGTAGAATTATTAAAGGATCGTCTGGAAGAACTAGAAGAGCAACATTCACAATTGCAGCGAGAGCATAGAGATAAATGCCGAGAACATGATCAACTGAAAAGGGCAGCTGCTAAACTGAAAGAAGACTTGGAGTGGTGCCGGTCTTTATTAGAAGAAAGAGATACTCTTATCAAGgAAGCTGGGTTGATGATAGTAGGTGATGACCATGTATCTAGTGATGATGAAAGCAGTGGTGGCAGTACAAATAATTCTACTTCTACAGCAAAAAAAGCTCCTCGTAAAGCACTTGTTTCTATAGAGTCTGCTGAACTTCTTAATTCTGTAGGAGAAGGTTCTCTTGaTGTACGATTGCGACGGTGTGCAGAAGAACGAAAtgagttgctggatgaagtaaGGCATTTGAAACTGGAATTAGAAGAAGCTCGTAGCCGAAATAAGCAACAGGATACTAGAGGGAGTGTGAATTTAAATGGTCCTGACATGGGACTCGCCGACCTGCAGCGAGAAGCTAACAAGCAACTGGGTGACTACAAGTTTAAATTGCAGAAAGCAGAACAAGATGTGTCAACATTGCAGGCCAATGTTGCTAGACTTGAAAGTCAAGTGATCAGGTACAAGTCAGCATCAGAATCAGCAGAGAAGGTTGAGGATGAGTTAAAGGTCGAGAAGAGAAAGTTACAACGTGAGCTCCGGGAAGCACAAGCAAGAGTGGAAGAATTAGAAACATCAAATACACACCTGCAAAGGCGACTAGACAAACTGAAAAGTGCCAAGTCTGCTTTACTGAAAGAGCTGTGA
- Protein Sequence
- MSADDTDESSSGSVVGDEVSEEVEQTNTSVDEVNDGESAEGAGEPGKLTGQDARNSTESEISDSRCNNGSESLENNDSFGKSVEENAKKGRIERSNSGSVRESTSETDDNDTQPDDGIMHFLDKSNNEAEARLAARRQARAEAREIRMRELERQQKEIEENADKVYDMYADTPPRASRVGTNVSATRLSTGTGSNSYQSSRRSSEDSLEEGINLRDVRLELKELEEKFRKAMIQNAQLDNEKSSLTYQVELLKDRLEELEEQHSQLQREHRDKCREHDQLKRAAAKLKEDLEWCRSLLEERDTLIKEAGLMIVGDDHVSSDDESSGGSTNNSTSTAKKAPRKALVSIESAELLNSVGEGSLDVRLRRCAEERNELLDEVRHLKLELEEARSRNKQQDTRGSVNLNGPDMGLADLQREANKQLGDYKFKLQKAEQDVSTLQANVARLESQVIRYKSASESAEKVEDELKVEKRKLQRELREAQARVEELETSNTHLQRRLDKLKSAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00678480;
- 90% Identity
- iTF_00678480;
- 80% Identity
- -