Basic Information

Insect: Zeuzera pyrina
Gene Symbol: -
Assembly: GCA_907165235.1
Location: OU015647.1:4507137-4509515[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 7.6e-06 0.00095 20.8 4.1 1 23 4 27 4 27 0.95

2 20 0.0019 0.24 13.2 1.2 2 23 33 55 31 55 0.92

3 20 1.1e-05 0.0014 20.3 0.2 2 23 64 86 64 86 0.97

4 20 9.7e-06 0.0012 20.4 1.5 2 23 95 117 94 117 0.94

5 20 0.00012 0.016 17.0 3.3 2 23 125 147 125 147 0.96

6 20 1.5e-06 0.00019 23.0 2.4 2 23 156 178 155 178 0.96

7 20 2.4e-06 0.0003 22.3 1.2 1 23 184 207 184 207 0.98

8 20 0.0057 0.72 11.7 1.7 1 23 215 238 215 238 0.94

9 20 3e-05 0.0037 18.9 1.0 1 23 259 282 259 282 0.97

10 20 0.00059 0.074 14.8 1.5 1 23 317 340 317 340 0.97

11 20 1.5 1.9e+02 4.1 0.7 2 21 348 367 347 368 0.91

12 20 0.0021 0.26 13.1 1.9 2 23 377 399 377 399 0.96

13 20 0.0035 0.44 12.4 5.3 1 23 422 445 422 445 0.97

14 20 5.2e-05 0.0066 18.1 0.7 2 23 452 474 451 474 0.96

15 20 6.9e-06 0.00086 20.9 1.7 2 23 481 503 480 503 0.94

16 20 0.0079 0.99 11.3 2.2 1 23 509 532 509 532 0.97

17 20 2.3 2.8e+02 3.6 6.2 2 23 540 562 540 562 0.95

18 20 5.5e-05 0.0069 18.1 0.2 1 23 569 592 569 592 0.97

19 20 0.0037 0.46 12.3 2.0 1 23 599 622 599 622 0.94

20 20 0.04 5.1 9.1 2.8 5 23 639 658 636 658 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	7.6e-06	0.00095	20.8	4.1	1	23	4	27	4	27	0.95
2	20	0.0019	0.24	13.2	1.2	2	23	33	55	31	55	0.92
3	20	1.1e-05	0.0014	20.3	0.2	2	23	64	86	64	86	0.97
4	20	9.7e-06	0.0012	20.4	1.5	2	23	95	117	94	117	0.94
5	20	0.00012	0.016	17.0	3.3	2	23	125	147	125	147	0.96
6	20	1.5e-06	0.00019	23.0	2.4	2	23	156	178	155	178	0.96
7	20	2.4e-06	0.0003	22.3	1.2	1	23	184	207	184	207	0.98
8	20	0.0057	0.72	11.7	1.7	1	23	215	238	215	238	0.94
9	20	3e-05	0.0037	18.9	1.0	1	23	259	282	259	282	0.97
10	20	0.00059	0.074	14.8	1.5	1	23	317	340	317	340	0.97
11	20	1.5	1.9e+02	4.1	0.7	2	21	348	367	347	368	0.91
12	20	0.0021	0.26	13.1	1.9	2	23	377	399	377	399	0.96
13	20	0.0035	0.44	12.4	5.3	1	23	422	445	422	445	0.97
14	20	5.2e-05	0.0066	18.1	0.7	2	23	452	474	451	474	0.96
15	20	6.9e-06	0.00086	20.9	1.7	2	23	481	503	480	503	0.94
16	20	0.0079	0.99	11.3	2.2	1	23	509	532	509	532	0.97
17	20	2.3	2.8e+02	3.6	6.2	2	23	540	562	540	562	0.95
18	20	5.5e-05	0.0069	18.1	0.2	1	23	569	592	569	592	0.97
19	20	0.0037	0.46	12.3	2.0	1	23	599	622	599	622	0.94
20	20	0.04	5.1	9.1	2.8	5	23	639	658	636	658	0.90

Sequence Information

Coding Sequence: atggATTCCTTCATCTGTGATTATTGTAGCCGCACATTCACCCGAAAATATAATCTTCAAACCCATATAGAAAATTGTCACTTAAATTCAacatgtcattgtgacatttGCCAACAGAGTTTCGGTAGCCCAGCAGGCTTACAACTCCATTTAAGCAGAGGCCATAACAGATATGGACAGCCTTTCCCCGAATGTGACATTTGTGGTAGAATCTTCACTAGAAAACAAAACATCATGTCACATATGATAACTGTGCATCTACAGGGTATTGGACCAGAAATCCGATGCAGATTATGCGACAAGACATTTACGACTGAACGTAATTTAAAAAGGCATGTACAGCAATTGCATAATCCTGATGTGGAATATCCCACATGCAACGAATGTCACAAAATTTTCAAAGGAAAGCATTCTTTGATTGCTCATATACAATCTAcccataatatatcaaataaaaccCTCATAAAATGCCATTTGTGCGACAAAGTGTATACGAATAATAGAAACTTGAAACGGCACATTGAAATGTTTCATGGAGAGAAAGGCGAATTTAGATGTGAACTTTGCCCAAAAGTGTACACTTCTAATCAAAGTCTTCGGAGACATGCACGCACAAGACACATGACAGATACAAATGAACAATATAAGTGTGATTACTGTGCAAAAACGATAAATGGAAAAGAGAATTTGGAGAGCCACATCCATTTTTATCATAGGCAGGACTTTCCTGTGTATGACTGTGAGGGTATGGATACTCAATACAAACTGTATACATTTGAATGTGAAACGTGCAACCAGTGCTTCGACGATGAACCACTTTTACGACGTCACATAAAAATGGAGCATTCATTTAACATCTTTTACGATTACTGCAAGAGATCGCTACTAAAGCAGGCTGCAACAAGTAATAAATTCTATGAAGATAAGCCCAGAAAACTGAATATTGTTTACAACTGCGAGTTTTGTAGTAATACTTTCTCAAGCGTTTACGAATTCAAGGACCATATGAGGATCAATCATGACAAGGAATACAGTCTTTCAACCTGCAATGTGTGCTTCAGCAAGTTCTACAGCAAAGAAACAATGTTGGAACACAAGAAAATTTGCTTACCTCCCGAAAACGTTAATTCATGTAGCCATTGCGACAAATTGTTCACTGACGTATCAAGTTTGGAGTTCCATATGCGAATTTTTCATCCCCAAGCACAATTAGCTGATTCTCACATAACGTCAACGAATTCTGAAGATTTGGAGATGGGTGCATTCAAATGTGTACACTGCGATAGGGTATATTACAGCGATAGGTCACTCAAACACcatataaaactaaaacataCAACAGACGAAGCCATGGAATGTGAATTCTGTGGAAAAATATGCAGCAATAAGTACTATTTGGCTTCCCACATCAAAATAGTTCACAGCAACGACTCTTGGTCGAAGTGCGACTATTGCGACAAAGTTTTTAAATCCAAAAGGAATATTCGACGGCATATAGAATATACCCACCTCGGCATGCAAAGGTACAAATGTATTGAATGTGAAACACTCTTCAAAGAGAAGAGGAGCTTACGAAAGCATGTCAGAACGAAGCACCCGAACTCCACAGCATTTCCGCAATGTCATTTCTGCTTCAAGAGATTTGAATCTGCCAAATCGTGCAAAATACATTTGAAACTGCTTCACTCATTCAATATGAATACGTTCCCATGCGATCTCTGTTCAGTATCTTTCAGTTCAAATGAAGCACTGAACATACATTTACAAACAAAGCATTTAGCTGAAGACGAGATTTATAAATGCGAGGAATGCAATTTAGTTTTCAGAGGCCAAGAGAAATTTGAACAACACAATGAAATGTGTCACGTTAATTTACTCCCAAATATCAAGCAAAAAGTTTTGCCTCGCTGTATTTTATGCATGAAGGATTTTAGCACACGCAAAACCCTCAAGCGTCACATCAAAAAGTTCCACAACGATTTTGATATAGATGAATTGGCTACTTTCGGCTCACGCAGAAGAATCTTCAACGTTGAATGTGAGGAATGTATTAAGAACTTTAATGACGATTACTACTTCAATATATATCAGAAACTGAGGCATTTACGTGATTCAGTCATATTTAAATGTGAGAATTGCAAATCGTCCTACAATTCTTTTGAATATTCGGTCCAAAGATACAAGTTAAATTTTGATGCGTCAAAAAGCAAGATGATTTTGAGTGAATTGTGTACAGCTGAAATGAGTGATGAGGAAATGAGCGGCTTCGGAGGTTTTAGCAAACTAATGGAGCCTCAAAGCACTACAGGGGGTATTAAAATTGAACTACCAGAGATAATGTCAGAGAGCAAAATTAAGACTGAACCGATGTCTCCTTGA
Protein Sequence: MDSFICDYCSRTFTRKYNLQTHIENCHLNSTCHCDICQQSFGSPAGLQLHLSRGHNRYGQPFPECDICGRIFTRKQNIMSHMITVHLQGIGPEIRCRLCDKTFTTERNLKRHVQQLHNPDVEYPTCNECHKIFKGKHSLIAHIQSTHNISNKTLIKCHLCDKVYTNNRNLKRHIEMFHGEKGEFRCELCPKVYTSNQSLRRHARTRHMTDTNEQYKCDYCAKTINGKENLESHIHFYHRQDFPVYDCEGMDTQYKLYTFECETCNQCFDDEPLLRRHIKMEHSFNIFYDYCKRSLLKQAATSNKFYEDKPRKLNIVYNCEFCSNTFSSVYEFKDHMRINHDKEYSLSTCNVCFSKFYSKETMLEHKKICLPPENVNSCSHCDKLFTDVSSLEFHMRIFHPQAQLADSHITSTNSEDLEMGAFKCVHCDRVYYSDRSLKHHIKLKHTTDEAMECEFCGKICSNKYYLASHIKIVHSNDSWSKCDYCDKVFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPNSTAFPQCHFCFKRFESAKSCKIHLKLLHSFNMNTFPCDLCSVSFSSNEALNIHLQTKHLAEDEIYKCEECNLVFRGQEKFEQHNEMCHVNLLPNIKQKVLPRCILCMKDFSTRKTLKRHIKKFHNDFDIDELATFGSRRRIFNVECEECIKNFNDDYYFNIYQKLRHLRDSVIFKCENCKSSYNSFEYSVQRYKLNFDASKSKMILSELCTAEMSDEEMSGFGGFSKLMEPQSTTGGIKIELPEIMSESKIKTEPMSP*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01564936;
90% Identity: iTF_01564936;
80% Identity: iTF_01564936;