Basic Information

Gene Symbol
-
Assembly
GCA_907165235.1
Location
OU015647.1:4507137-4509515[+]

Transcription Factor Domain

TF Family
zf-BED
Domain
zf-BED domain
PFAM
PF02892
TF Group
Zinc-Coordinating Group
Description
The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 0.016 9.1 7.7 1.3 18 43 5 27 2 28 0.92
2 15 0.00074 0.43 12.0 0.0 18 43 64 86 61 87 0.94
3 15 0.00089 0.52 11.7 0.4 17 44 94 118 92 118 0.92
4 15 0.0025 1.4 10.3 2.5 18 44 125 148 123 148 0.94
5 15 0.0011 0.63 11.4 2.9 14 43 152 178 149 179 0.90
6 15 0.03 17 6.8 0.4 17 43 184 207 180 208 0.89
7 15 0.008 4.7 8.6 0.7 17 40 215 235 209 239 0.81
8 15 0.11 62 5.0 0.1 17 43 317 340 304 341 0.78
9 15 0.073 42 5.6 0.1 14 44 373 400 368 400 0.88
10 15 0.23 1.3e+02 4.0 3.0 15 43 420 445 411 446 0.87
11 15 5 2.9e+03 -0.3 8.0 12 29 446 463 439 475 0.72
12 15 0.016 9.3 7.7 2.3 13 43 476 503 468 504 0.78
13 15 0.21 1.2e+02 4.1 0.8 17 44 509 533 505 533 0.85
14 15 9.3 5.4e+03 -1.2 0.1 34 43 583 592 568 593 0.68
15 15 0.00068 0.4 12.1 3.3 6 44 622 659 620 659 0.78

Sequence Information

Coding Sequence
atggATTCCTTCATCTGTGATTATTGTAGCCGCACATTCACCCGAAAATATAATCTTCAAACCCATATAGAAAATTGTCACTTAAATTCAacatgtcattgtgacatttGCCAACAGAGTTTCGGTAGCCCAGCAGGCTTACAACTCCATTTAAGCAGAGGCCATAACAGATATGGACAGCCTTTCCCCGAATGTGACATTTGTGGTAGAATCTTCACTAGAAAACAAAACATCATGTCACATATGATAACTGTGCATCTACAGGGTATTGGACCAGAAATCCGATGCAGATTATGCGACAAGACATTTACGACTGAACGTAATTTAAAAAGGCATGTACAGCAATTGCATAATCCTGATGTGGAATATCCCACATGCAACGAATGTCACAAAATTTTCAAAGGAAAGCATTCTTTGATTGCTCATATACAATCTAcccataatatatcaaataaaaccCTCATAAAATGCCATTTGTGCGACAAAGTGTATACGAATAATAGAAACTTGAAACGGCACATTGAAATGTTTCATGGAGAGAAAGGCGAATTTAGATGTGAACTTTGCCCAAAAGTGTACACTTCTAATCAAAGTCTTCGGAGACATGCACGCACAAGACACATGACAGATACAAATGAACAATATAAGTGTGATTACTGTGCAAAAACGATAAATGGAAAAGAGAATTTGGAGAGCCACATCCATTTTTATCATAGGCAGGACTTTCCTGTGTATGACTGTGAGGGTATGGATACTCAATACAAACTGTATACATTTGAATGTGAAACGTGCAACCAGTGCTTCGACGATGAACCACTTTTACGACGTCACATAAAAATGGAGCATTCATTTAACATCTTTTACGATTACTGCAAGAGATCGCTACTAAAGCAGGCTGCAACAAGTAATAAATTCTATGAAGATAAGCCCAGAAAACTGAATATTGTTTACAACTGCGAGTTTTGTAGTAATACTTTCTCAAGCGTTTACGAATTCAAGGACCATATGAGGATCAATCATGACAAGGAATACAGTCTTTCAACCTGCAATGTGTGCTTCAGCAAGTTCTACAGCAAAGAAACAATGTTGGAACACAAGAAAATTTGCTTACCTCCCGAAAACGTTAATTCATGTAGCCATTGCGACAAATTGTTCACTGACGTATCAAGTTTGGAGTTCCATATGCGAATTTTTCATCCCCAAGCACAATTAGCTGATTCTCACATAACGTCAACGAATTCTGAAGATTTGGAGATGGGTGCATTCAAATGTGTACACTGCGATAGGGTATATTACAGCGATAGGTCACTCAAACACcatataaaactaaaacataCAACAGACGAAGCCATGGAATGTGAATTCTGTGGAAAAATATGCAGCAATAAGTACTATTTGGCTTCCCACATCAAAATAGTTCACAGCAACGACTCTTGGTCGAAGTGCGACTATTGCGACAAAGTTTTTAAATCCAAAAGGAATATTCGACGGCATATAGAATATACCCACCTCGGCATGCAAAGGTACAAATGTATTGAATGTGAAACACTCTTCAAAGAGAAGAGGAGCTTACGAAAGCATGTCAGAACGAAGCACCCGAACTCCACAGCATTTCCGCAATGTCATTTCTGCTTCAAGAGATTTGAATCTGCCAAATCGTGCAAAATACATTTGAAACTGCTTCACTCATTCAATATGAATACGTTCCCATGCGATCTCTGTTCAGTATCTTTCAGTTCAAATGAAGCACTGAACATACATTTACAAACAAAGCATTTAGCTGAAGACGAGATTTATAAATGCGAGGAATGCAATTTAGTTTTCAGAGGCCAAGAGAAATTTGAACAACACAATGAAATGTGTCACGTTAATTTACTCCCAAATATCAAGCAAAAAGTTTTGCCTCGCTGTATTTTATGCATGAAGGATTTTAGCACACGCAAAACCCTCAAGCGTCACATCAAAAAGTTCCACAACGATTTTGATATAGATGAATTGGCTACTTTCGGCTCACGCAGAAGAATCTTCAACGTTGAATGTGAGGAATGTATTAAGAACTTTAATGACGATTACTACTTCAATATATATCAGAAACTGAGGCATTTACGTGATTCAGTCATATTTAAATGTGAGAATTGCAAATCGTCCTACAATTCTTTTGAATATTCGGTCCAAAGATACAAGTTAAATTTTGATGCGTCAAAAAGCAAGATGATTTTGAGTGAATTGTGTACAGCTGAAATGAGTGATGAGGAAATGAGCGGCTTCGGAGGTTTTAGCAAACTAATGGAGCCTCAAAGCACTACAGGGGGTATTAAAATTGAACTACCAGAGATAATGTCAGAGAGCAAAATTAAGACTGAACCGATGTCTCCTTGA
Protein Sequence
MDSFICDYCSRTFTRKYNLQTHIENCHLNSTCHCDICQQSFGSPAGLQLHLSRGHNRYGQPFPECDICGRIFTRKQNIMSHMITVHLQGIGPEIRCRLCDKTFTTERNLKRHVQQLHNPDVEYPTCNECHKIFKGKHSLIAHIQSTHNISNKTLIKCHLCDKVYTNNRNLKRHIEMFHGEKGEFRCELCPKVYTSNQSLRRHARTRHMTDTNEQYKCDYCAKTINGKENLESHIHFYHRQDFPVYDCEGMDTQYKLYTFECETCNQCFDDEPLLRRHIKMEHSFNIFYDYCKRSLLKQAATSNKFYEDKPRKLNIVYNCEFCSNTFSSVYEFKDHMRINHDKEYSLSTCNVCFSKFYSKETMLEHKKICLPPENVNSCSHCDKLFTDVSSLEFHMRIFHPQAQLADSHITSTNSEDLEMGAFKCVHCDRVYYSDRSLKHHIKLKHTTDEAMECEFCGKICSNKYYLASHIKIVHSNDSWSKCDYCDKVFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPNSTAFPQCHFCFKRFESAKSCKIHLKLLHSFNMNTFPCDLCSVSFSSNEALNIHLQTKHLAEDEIYKCEECNLVFRGQEKFEQHNEMCHVNLLPNIKQKVLPRCILCMKDFSTRKTLKRHIKKFHNDFDIDELATFGSRRRIFNVECEECIKNFNDDYYFNIYQKLRHLRDSVIFKCENCKSSYNSFEYSVQRYKLNFDASKSKMILSELCTAEMSDEEMSGFGGFSKLMEPQSTTGGIKIELPEIMSESKIKTEPMSP*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01564940;
90% Identity
iTF_01564940;
80% Identity
iTF_01564940;