Zpyr007098.1
Basic Information
- Insect
- Zeuzera pyrina
- Gene Symbol
- lrrfip2
- Assembly
- GCA_907165235.1
- Location
- OU015620.1:25233420-25252226[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.054 2.5e+03 -1.2 0.8 241 281 75 115 55 118 0.86 2 3 3.1e-79 1.4e-74 252.4 24.1 1 298 133 422 133 423 0.89 3 3 1 4.6e+04 -6.4 15.3 1 47 420 465 420 497 0.70
Sequence Information
- Coding Sequence
- ATGGGCAATCAGTCAAAACTGGCGACACCAGTGAACAGTGAAGAGGAGAGCGGCGAAGAATTCACTgatggtgattttggtgattCCGAAGAGGAAACTGTTGTTGAAAGAATCGAAGATTCAAAAACTTCTAAAATTCCTGTCAACGAAACTGTTAATACCGAGGTGAAAAAAGTAAATGTCAATATTGATACTGATAATACATCAGAGAATTGTTTAGACGATTTGAATAGTTCCACTGATGAAGTCAAAGTTAATGGACATAAATGTGATGACAATGTGCAATCCAATGAAGCGGATAATCACAAAGGCTATGAAATAACTGATGTTCGAAGGGATTCCCATAGCGAACAAAATCCTTCAATAGTCGGCATACTCGGCGATCAACAGAAccatGCGGAACAACGGCTGGCGGCGCGACGTGCAGCGCGGGCGGAGGCGCGGGAAATACGTATGCGTGAGCTAGAAAGGCAACAGAGGGAACAAGAGAATCATGCGGACAAAGCCTATGATATGTATGCAGAGACGGTGGGGAGGCGCGGGGGCGGGCGGTTGTCGGCCCTCAGCCCCGCCGGGCTGCATTCGCCGCGCCGTAGCTCCGAGGACTCCGCCGATGACAGCTTCAGTATTAAAGACCTCAGGCATGAATTAAAAGAAGTGGAGGAGAAGTTCCGCAAGGCAATGATATTGAACGCGCAGTTGGACAATGATAAAGCGGCACTGGGCTACCAGCTGGAACTGCTCAAAGACAGGATAGAGGAACTACATGAGGAATATGCACAGTTACAGCGCGAGCACAAAGAGAAGTGTTCGTCGCACGAGCGGCTGAAGAGGGAGCACGCGTCGTTAGAGCGAGAAGTcggcgcggcgcgggcggcCGTGCGCGCGAGGGACgcagccgccgccgccgccggctTCGCCTTCGTCGACGCCGAGGACGACTCCGTGTCCGACACGGCGCCCGGCACCGTGCCCGACACCGTGCCCGGCGCGCCCCGCCTCGCGCTCGTCTCGCACCAGTCCGAGCAGCTGCTCAACGACGCCGGCGAGGGCACGCTCGATGTCCGGTTGCAAAAATTATTAAGCTCGAAGCAGTCGTTGGAGTCTGAAGTCCGCAAACTGAAGTTACAGCTGAATGACGAGCGTGCAGCGAGACAGAACGGTGTCACCAATCACCACGATAGTGAATTAGAAATTGAACTGGAGGCGGTGCGCAAGTCGCTGTCGGAGGCGAAggcgcgcgcggcgcgcgcggaGGCCGAGGCGGCGCTGCAGGCGGCCGGCGTGGCGCGGCTGGAGGCGCAGGTGGCGCGGCTGCGCGCGCGCCAGGACCACCAGGACGAGCACGAGGAGGCGCTCAAGCACGAGCGGCGCCGCCTGCAGCGGGAGGCGCGGGAAGCACTCAATAGAGTGGAGGAATTAGAAACGGAGAATAGTCACCTGACGAAACGTCTCGACAAACTCAAGAACGCCAAGTCAGCGCTTCTCAAAGACCTGTGA
- Protein Sequence
- MGNQSKLATPVNSEEESGEEFTDGDFGDSEEETVVERIEDSKTSKIPVNETVNTEVKKVNVNIDTDNTSENCLDDLNSSTDEVKVNGHKCDDNVQSNEADNHKGYEITDVRRDSHSEQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQENHADKAYDMYAETVGRRGGGRLSALSPAGLHSPRRSSEDSADDSFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHKEKCSSHERLKREHASLEREVGAARAAVRARDAAAAAAGFAFVDAEDDSVSDTAPGTVPDTVPGAPRLALVSHQSEQLLNDAGEGTLDVRLQKLLSSKQSLESEVRKLKLQLNDERAARQNGVTNHHDSELEIELEAVRKSLSEAKARAARAEAEAALQAAGVARLEAQVARLRARQDHQDEHEEALKHERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -