Zpyr019425.1
Basic Information
- Insect
- Zeuzera pyrina
- Gene Symbol
- -
- Assembly
- GCA_907165235.1
- Location
- OU015629.1:1078813-1097751[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.3e-10 1.3e-07 32.5 0.0 4 39 150 186 147 190 0.90 2 3 4.2e-10 1.7e-07 32.2 0.1 4 39 204 239 201 242 0.90 3 3 2.1e-08 8.2e-06 26.8 0.1 2 32 257 287 256 289 0.95
Sequence Information
- Coding Sequence
- ATGCCGGGGCCGGACTTGTCTCAAGTGAAATGCGAGCCACCTTCTGACGAGGAAGACAGCAATTCGAGATTTCCGCTTAGCTATTTAAATAATCAGTCGAGCGGCCTGGAAGAGCTGGCCCCCTTGGCGCCGGCCGGCCCGGCCGCCACTCCGGTCTGCGTCAAACAGGAACCTGCGGAAGCGCCTCCCACCACTACACTCGAGACGCTCGAGCCATCATCACATAACAATaagggCAATATGCTCATCGATAGGCACATGGCTATGCTCAAATCAAACGAAGTGCCTGATTCATCGGACTTCGTTCCGTTGCTGACGGTGAAAGATGAGCCCTCGTCGGAGGGAGAGCAGCACCACAGCGGCGAGGACACGAGCGACTCGTGCGGCGGCGCCGGCGGGCTGGCGGAGGCGAGCGGCCGGCCTGGGCCCAAGAGCTGGACACAGCGGGACATGGACAACGCGTTGGAAGCGCTACGGAAACATAACATGAGTCTTACTAAGGCGTCGGCGCAGTTCGGCATCCCGTCCACGACGCTGTGGCAGCGCGCGCACCGGCTCGGCATCGACACGCCCAAGCGCGAGGGCGGCGCCAAGTCGTGGAGCGAGCGCGACCTGCGCGGAGCGCTACACGCGCTGCGCGCCGGACACATCTCCGCCAACAAGGCCAGCAAGGCCTACGGCATCCCCAGCAGCACGCTGTACAAGATCGCGCGGCGCGAGGGCATCCGTCTGGCGGCGCCGTTCAACGCCGCGCCCACGGCGTGGCGCCGCGCCGACCTGGAGCGCGCGCTCGCGTCCATCCGCTGCGGCGCCGCGTCCGTGCAGCGCGCCGCCTCGCAGTTCGGCATCCCCACGGGTACCGCCCACACCACGCCGCACTCTGCATACCGCATACCGCATACCGCACACTGCACACCGTACACTGCACACCGTACACccccacgaagtaaaaacgaagaggaggcgccgtaa
- Protein Sequence
- MPGPDLSQVKCEPPSDEEDSNSRFPLSYLNNQSSGLEELAPLAPAGPAATPVCVKQEPAEAPPTTTLETLEPSSHNNKGNMLIDRHMAMLKSNEVPDSSDFVPLLTVKDEPSSEGEQHHSGEDTSDSCGGAGGLAEASGRPGPKSWTQRDMDNALEALRKHNMSLTKASAQFGIPSTTLWQRAHRLGIDTPKREGGAKSWSERDLRGALHALRAGHISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLERALASIRCGAASVQRAASQFGIPTGTAHTTPHSAYRIPHTAHCTPYTAHRTPPRSKNEEEAP*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00007934;
- 90% Identity
- -
- 80% Identity
- -