Ztau024811.1
Basic Information
- Insect
- Zeugodacus tau
- Gene Symbol
- Aef1
- Assembly
- GCA_031772095.1
- Location
- CM062653.1:59231331-59232405[-]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.0057 82 4.1 0.1 22 48 193 219 189 223 0.86 2 4 1.7e-05 0.24 12.2 0.0 21 52 220 251 217 252 0.89 3 4 0.016 2.2e+02 2.7 0.0 21 48 248 275 246 279 0.85 4 4 8.9e-05 1.3 9.9 0.1 21 47 276 302 272 309 0.88
Sequence Information
- Coding Sequence
- ATGCACATCAAAAATTTGCAACATGCCCATGCGGCCTCCGCTGCAATGGGTAATTGTGAGATTGTCATTGTGTCATCGTCGCCGAATAATGCTGCAACgagtgccaacaacaataacaataataataatagcaacaacaataatgagaATAACGCGGGATCACAccatcagcagcaacagcaatcccagcaacaacaacaacagcagcaccagGCGCCAACTACAACAGAAATACCGATTCCGTTCAATATGCACCTGGCCGCGGCCAACACGGAAGCGCACGTTGCTGCCCAAGCAGCCGCAATGGCGGCAGCACAAGCGGCCGCTGCACAAGCTGTCGCTGCTGAGCAACAGCAAGCCTCGGGTGGCAGTAACGGTGCGAATGCCACAACAATTTTGCAGCAACATCCCTTAGCGCATCTGGTAGCGACAGCAGCTCACAGTCCAGCCTTGTCAGAGCATCACTTCGCTGCCGGTCGGGAAGTGGTTGCAAATGGACACAGTGCGGGCAGCAGTACGAatggtggcggtggcggcggcgccAATAGCAGCGGTAGTAGCGGTGGTGGTGGTCATGAAAAACCTTTTCTCTGCAGCGTTTGCGATCGGCGGTTTCGGCAATTGAGCACACTCACCAACCACGTGAAAATACATACAGGCGAGAAACCCTACAAATGTAACGTTTGTGATAAAACCTTTCGTCAATCGTCCACGCTAACGAATCACCTAAAAATACACACCGGTGAAAAACCATTTAATTGCACATATTGTCCGAAGAATTTCCGACAATTAAGTACCCTAACGAATCATGTGAAAATCCATActgGTGAGAAACCattcgaatgtgccgtttgtaaGAAACAATTCCGTCAATCAAGTACACTTAACAACCATATAAAGATACACGTTATGGACAAGGTGTACGTACCCGTTAAGATAAAGACGGAAGAGGAGGAGGGATGA
- Protein Sequence
- MHIKNLQHAHAASAAMGNCEIVIVSSSPNNAATSANNNNNNNNSNNNNENNAGSHHQQQQQSQQQQQQQHQAPTTTEIPIPFNMHLAAANTEAHVAAQAAAMAAAQAAAAQAVAAEQQQASGGSNGANATTILQQHPLAHLVATAAHSPALSEHHFAAGREVVANGHSAGSSTNGGGGGGANSSGSSGGGGHEKPFLCSVCDRRFRQLSTLTNHVKIHTGEKPYKCNVCDKTFRQSSTLTNHLKIHTGEKPFNCTYCPKNFRQLSTLTNHVKIHTGEKPFECAVCKKQFRQSSTLNNHIKIHVMDKVYVPVKIKTEEEEG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01358358;
- 90% Identity
- iTF_01564040; iTF_00082582; iTF_00081795; iTF_00082423; iTF_00081629; iTF_01563343; iTF_01563172; iTF_01189841; iTF_00191730; iTF_00191587; iTF_00193827; iTF_00190891; iTF_00193968; iTF_00190357; iTF_00193206; iTF_00190200; iTF_00191034; iTF_00193055; iTF_00192468; iTF_00192308; iTF_00083387; iTF_00083569;
- 80% Identity
- iTF_01564040;