Basic Information

Insect: Zeugodacus tau
Gene Symbol: -
Assembly: GCA_031772095.1
Location: CM062650.1:50352439-50355316[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 8.7 8.6e+02 1.4 0.4 2 23 226 247 225 247 0.89

2 12 0.00034 0.034 15.3 0.2 3 23 292 313 291 313 0.94

3 12 1.5 1.5e+02 3.8 2.7 2 23 368 389 367 389 0.96

4 12 1.8e-05 0.0018 19.3 2.1 1 23 395 418 395 418 0.96

5 12 0.47 46 5.4 0.8 2 23 435 455 434 455 0.95

6 12 0.015 1.4 10.1 3.4 1 23 469 491 469 491 0.94

7 12 8.7e-06 0.00086 20.3 1.6 1 23 500 523 500 523 0.96

8 12 0.00013 0.013 16.6 1.2 1 23 528 550 528 550 0.96

9 12 3.3e-05 0.0032 18.5 3.3 2 23 556 577 555 577 0.97

10 12 0.0066 0.65 11.2 2.3 1 23 583 605 583 605 0.97

11 12 0.0008 0.08 14.1 3.2 1 23 610 632 610 632 0.95

12 12 0.079 7.9 7.8 1.4 1 23 637 661 637 661 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	8.7	8.6e+02	1.4	0.4	2	23	226	247	225	247	0.89
2	12	0.00034	0.034	15.3	0.2	3	23	292	313	291	313	0.94
3	12	1.5	1.5e+02	3.8	2.7	2	23	368	389	367	389	0.96
4	12	1.8e-05	0.0018	19.3	2.1	1	23	395	418	395	418	0.96
5	12	0.47	46	5.4	0.8	2	23	435	455	434	455	0.95
6	12	0.015	1.4	10.1	3.4	1	23	469	491	469	491	0.94
7	12	8.7e-06	0.00086	20.3	1.6	1	23	500	523	500	523	0.96
8	12	0.00013	0.013	16.6	1.2	1	23	528	550	528	550	0.96
9	12	3.3e-05	0.0032	18.5	3.3	2	23	556	577	555	577	0.97
10	12	0.0066	0.65	11.2	2.3	1	23	583	605	583	605	0.97
11	12	0.0008	0.08	14.1	3.2	1	23	610	632	610	632	0.95
12	12	0.079	7.9	7.8	1.4	1	23	637	661	637	661	0.97

Sequence Information

Coding Sequence: ATGGTAAACCAATGTCGCGTCTGCCTCAATTCGAAAGACATCGCCTTTATACGTATGGAGACGCACATAGCTGAtggtttcgatttttttacttGCTTCAGTCTATGCACCCAACTGGAAGCGGGACTTGATGATGGCCTGCCAGGAGTATTATGCACACATTGCTCTCAGGATCTCGAAATCTCCTTTAATTTCATGCAAAATGCCAGACAGGCTGATGGTATACTCCGAGAGAGCATGTCCCAAAAGTACTTGTCCGATGAAATTGAAACATTGGAGACCGAAATTGGTGATACAATAATGGAGCCATTGGAAGTTGTAGAAGATAGTGAAGTAGAAGATTGTGTAGTGGAGGAACTTATAGAAGATGTACTTGTACCAGGAGACGTCGCCGAAGAGCGTGATGAAAGCGGTGTGGTTGAAATAATGGAGGTTGAGAAAGATGAGCTAAACATTTGTGAAAGTTCTCTGGATGAAATAGAACTTGTAGAAAACCACTATGTGGATCAAACTGTTGAGACCGCTGAGGTTGAGTTGGACGAAGAATATGAATCACAGAGAAAAACAGGAGAGTATTATGCAGAAGATGAGGGTGACGAAGTATACCTAAAAGAGTACAAAGAAAATGTGGAGCAATCGGATGCAGAAAATCCGAGCTCAAAAGGAGGAAAATGGAAATGTATAGAGTGTAAACGTGTTTTGTGTGGCGATGTCTCTTATGAAGGCCATATGAACATGCACCGCTCATTGCGACCATACAAATGTAcgttatgtatgtgtgcattccGTTGCAAAAATAAACTGGACCAACATATACAGCTGCGTCACGAACAACCGCCAAATGAGACGCAAAACACGAATCCTAGCAACAATTGTCagaaatgtacaaaaattttCGAGACACCCGAGGAATTACAAGAGCACCAAGAATTAATACATCCCGATAGTTATCCTGTACAATGTAGACGCTGTCCGCTACTAGCACCATTTGCGCGCACAAAACTAATGGAACACTTTCGCAATGAACATCCAACGGaacatcgaaaatattttcccaCAGTGGGTAGACCACCAAACGAACCAGCCAAACCAACACCATGGCAATGTGAAGTGTGTAAATGTTATATGCGATCAGAGGCAGCTTTGCGTGATCACCGGCACACTCACCAGCATGAACGGCCACATGAGTGCCAATTTTGTGCGAAACGTTTTGTTACTACAAGTAATTTACGCCAACATATGCGCGGCGTACACACCGAGGAATATGAGAAGTTGGTGAGTGAAGGCGGCGATACGATAGTGCAAtgtgaaatgtgtaaaaaacaacTACTTCGACGAAATCTCGATAAACATATGGCCTTACATGTGAGAAAGGAGCGTGAGGCGAAGGAGACGCAAACGAAATTTCTTTGTGCCTACTGCTCACGCGAGTGTAAAAGTCAAAAATCCCTCAACCAACACGAGAAACTGCATCAGGGAGCCTCGCCTGATGTTATATACATTTGCAACGACTGTGATCGTTCCTATGCGACACAACACTTGTTGCAGCAACATCGTAAGCAAGCGCACAAGGAACGGGATCACTTCTGTCCGATATGTGGCAATGGTTTCAAGCTCAAGAATCAATTGGTGAATCATATGAAATTGCATTTGGAAAAGAATATCAAATGTCCGCATTGTGAGAAATGTTATGCGCGAAAATTCGATCTGGATGTGCATTTGCGCAGTCACACGGGAGAGCTACCATTCGCGTGTCACCTGTGTGAGAAACGTTTTGCGATAAAGGTACGCCTGACCTACCATTTACAGAAGCACTATGGCATAAAGCATCGTTGCAAGGATTGTGGTGCGGAATTCAATTCGAAACAGAAACTAAAAGCGCATAGTTTCAAACATACTGGCATGCCATATAGGTGTGAGCGATGTGATGGACATGGCTTCGCCAATCGTGATGTcTTCAAACGACATTTGCAGCGCGTGCATTGCGCTAGTATGAGCGATGAGGAGTTGGTGGCCATGTTCCAGCAAAACACTGGCAAGGCCACACGCATACGGCAGGTTGAATATTTTGAGGATAATTCGCAAGAAGAGCCTACAAAGAACGCTGCGGAAACGGACAACACTTTGATTAACGCAGATGAGATTGCACTGGAATCGGAAGTGATACACAGCTGA
Protein Sequence: MVNQCRVCLNSKDIAFIRMETHIADGFDFFTCFSLCTQLEAGLDDGLPGVLCTHCSQDLEISFNFMQNARQADGILRESMSQKYLSDEIETLETEIGDTIMEPLEVVEDSEVEDCVVEELIEDVLVPGDVAEERDESGVVEIMEVEKDELNICESSLDEIELVENHYVDQTVETAEVELDEEYESQRKTGEYYAEDEGDEVYLKEYKENVEQSDAENPSSKGGKWKCIECKRVLCGDVSYEGHMNMHRSLRPYKCTLCMCAFRCKNKLDQHIQLRHEQPPNETQNTNPSNNCQKCTKIFETPEELQEHQELIHPDSYPVQCRRCPLLAPFARTKLMEHFRNEHPTEHRKYFPTVGRPPNEPAKPTPWQCEVCKCYMRSEAALRDHRHTHQHERPHECQFCAKRFVTTSNLRQHMRGVHTEEYEKLVSEGGDTIVQCEMCKKQLLRRNLDKHMALHVRKEREAKETQTKFLCAYCSRECKSQKSLNQHEKLHQGASPDVIYICNDCDRSYATQHLLQQHRKQAHKERDHFCPICGNGFKLKNQLVNHMKLHLEKNIKCPHCEKCYARKFDLDVHLRSHTGELPFACHLCEKRFAIKVRLTYHLQKHYGIKHRCKDCGAEFNSKQKLKAHSFKHTGMPYRCERCDGHGFANRDVFKRHLQRVHCASMSDEELVAMFQQNTGKATRIRQVEYFEDNSQEEPTKNAAETDNTLINADEIALESEVIHS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00190210;
90% Identity: iTF_01563206;
80% Identity: -