Basic Information

Insect: Zeugodacus tau
Gene Symbol: -
Assembly: GCA_031772095.1
Location: CM062651.1:7818165-7820013[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0036 0.35 12.1 4.4 1 23 265 288 265 288 0.98

2 8 0.0017 0.16 13.1 1.0 2 23 292 313 291 313 0.96

3 8 4.5e-05 0.0045 18.0 1.5 1 23 317 340 317 340 0.95

4 8 0.00019 0.019 16.0 0.1 1 23 346 368 346 368 0.98

5 8 2.7e-07 2.7e-05 25.0 5.1 1 23 374 396 374 396 0.98

6 8 5.6e-05 0.0056 17.7 0.7 1 23 400 422 400 422 0.96

7 8 1.6e-05 0.0016 19.4 2.2 1 23 428 450 428 450 0.96

8 8 0.3 29 6.0 3.8 1 12 456 467 456 479 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0036	0.35	12.1	4.4	1	23	265	288	265	288	0.98
2	8	0.0017	0.16	13.1	1.0	2	23	292	313	291	313	0.96
3	8	4.5e-05	0.0045	18.0	1.5	1	23	317	340	317	340	0.95
4	8	0.00019	0.019	16.0	0.1	1	23	346	368	346	368	0.98
5	8	2.7e-07	2.7e-05	25.0	5.1	1	23	374	396	374	396	0.98
6	8	5.6e-05	0.0056	17.7	0.7	1	23	400	422	400	422	0.96
7	8	1.6e-05	0.0016	19.4	2.2	1	23	428	450	428	450	0.96
8	8	0.3	29	6.0	3.8	1	12	456	467	456	479	0.89

Sequence Information

Coding Sequence: ATGTCGGATATTGAATTGAATCAAAAATATCCCTTGGTACTTGAGGAAACCAATCCTTTCATTGAGGAATGGAAACGTTGGTGTCGGCTCTGTGCAAAGGCTGATGTACAATGTATTAATGTTTTATCAGGACACTGTGTGCAATCCACTCTCGCAAGTGATAATTACAATTCTTTAAACATACTTGCCGCTATAGAAGAATTTTTTCACGTACAAATTAAAGAAGATGAGAAGCTCTCACCTTTTGTATGTGCTGAGTGTTACGAGGTGGTAACATCGTTTGTTAAATTTAATGCTAACATCAAAAAGGTCCAGCAATTGTACGATGAGCTTTTGCATAGCGATGATAAAACCAAACTCAATTTATCAGCTTTATATGATAAGTATGGTCTATTCCGGGATGAAGCTATTTTGACACAAAGCAGTACCAAACTACCAGTGGAAGAAATTTTCATTGCTGATTCACCAGTGCCGAAGTGTTCTAATTTTtcgatacaaataaaaaatgaaagatCGGATGAATTCCCAGCAGAAGTATTCATTAAAGAATTTGACAAAAAAGAAGAATTTCAAGATCCATTTGGTGAAGAGGAAGTACTTACTGGTATGCAAAACAATTCTCCACTAAATGAAGACGAAAATAATAGCAGAAGTGAAGACTTGAATGTGCCAATGGATACCGAAGATTCAGATGAAGacgtagaagaagaagaggaagttTGTACAAACAATAGAATTAATAATGACAGTGTGGAATCGGAAGATTCTACCGAAATATCCAAAGGAACTGAATATACTTGTAGTATTTGTTTAATGCGTTTTCATCGTAGAAGTAACTATTCGGTACATGTAAAGAAAAAGCATGATAAAATTGTATGCACGCATTGTCCAAGCTTATTTGATAGTAAACCAAGTTTAAAGCAACACATGAAAGATCATCGACAATTATTCCCCTGCCCGCACTGCGATCGAAAGTTCGTAACAAAAGAATATGTATCGCAacacataaaatttatacatGATGATGAACGCCCATTCATTTGCGAGACGTGTGGTGATGCCGTGCGCACGAAAGGACAACTTAAAGAGCACATGTTGACCCACACAGACTATTCTCCCTTTGAATGCAAAGAATGTGGCAAATGTTTCAAGCAAAAGCAACGTTTAAAGCGGCATATGCAGATACACGGAGACAAGCATATCTGTACGGAATGTGGCAAGCAACTAAGCACGCGCGCTACACTAAATAGTCACCTACTAGTGCATTCCGACAAGATGCCACACAAATGTGATTATTGTGGACGGCTTTTCAAACGGGCTAAAACgcttaaaaatcatttaattgcACATACTGGCCTTAGACCTTATTCATGTGACTTTTGTGACAAAACCTTTTCAACTGGACCGAGCTGTCGTTTTCACAAGAAAACTATGCATCCAGTTGAATTGGCTGCACAAGAGGCGGCAGGCGTGAAAACATATACGAAGAATATACCAAATTTAGATGTTTTAAAGGCCgtTTCGCGAACTGCAGAGAATCTTACTCCTCTAGCATCGAAACAAAACGGTTATGCTACATTCGATAGAAAGAAAGAGCCGCCAAAAGCGGATATTGAAACAAAAACGAACGAAGCAATTATGGCAGTTGATGCATAA
Protein Sequence: MSDIELNQKYPLVLEETNPFIEEWKRWCRLCAKADVQCINVLSGHCVQSTLASDNYNSLNILAAIEEFFHVQIKEDEKLSPFVCAECYEVVTSFVKFNANIKKVQQLYDELLHSDDKTKLNLSALYDKYGLFRDEAILTQSSTKLPVEEIFIADSPVPKCSNFSIQIKNERSDEFPAEVFIKEFDKKEEFQDPFGEEEVLTGMQNNSPLNEDENNSRSEDLNVPMDTEDSDEDVEEEEEVCTNNRINNDSVESEDSTEISKGTEYTCSICLMRFHRRSNYSVHVKKKHDKIVCTHCPSLFDSKPSLKQHMKDHRQLFPCPHCDRKFVTKEYVSQHIKFIHDDERPFICETCGDAVRTKGQLKEHMLTHTDYSPFECKECGKCFKQKQRLKRHMQIHGDKHICTECGKQLSTRATLNSHLLVHSDKMPHKCDYCGRLFKRAKTLKNHLIAHTGLRPYSCDFCDKTFSTGPSCRFHKKTMHPVELAAQEAAGVKTYTKNIPNLDVLKAVSRTAENLTPLASKQNGYATFDRKKEPPKADIETKTNEAIMAVDA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00191626;
90% Identity: iTF_00192293;
80% Identity: -