Basic Information

Insect: Bactrocera minax
Gene Symbol: -
Assembly: None
Location: JAPVRH010003406.1:28825-30680[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0074 0.57 11.0 2.6 1 23 261 284 261 284 0.98

2 8 0.00058 0.044 14.5 1.2 2 23 288 309 287 309 0.96

3 8 4.4e-05 0.0034 18.0 1.5 1 23 313 336 313 336 0.95

4 8 0.00019 0.014 16.1 0.1 1 23 342 364 342 364 0.98

5 8 2.6e-07 2e-05 25.0 5.1 1 23 370 392 370 392 0.98

6 8 5.5e-05 0.0042 17.7 0.7 1 23 396 418 396 418 0.96

7 8 1.6e-05 0.0012 19.4 2.2 1 23 424 446 424 446 0.96

8 8 0.29 22 6.0 3.8 1 12 452 463 452 475 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0074	0.57	11.0	2.6	1	23	261	284	261	284	0.98
2	8	0.00058	0.044	14.5	1.2	2	23	288	309	287	309	0.96
3	8	4.4e-05	0.0034	18.0	1.5	1	23	313	336	313	336	0.95
4	8	0.00019	0.014	16.1	0.1	1	23	342	364	342	364	0.98
5	8	2.6e-07	2e-05	25.0	5.1	1	23	370	392	370	392	0.98
6	8	5.5e-05	0.0042	17.7	0.7	1	23	396	418	396	418	0.96
7	8	1.6e-05	0.0012	19.4	2.2	1	23	424	446	424	446	0.96
8	8	0.29	22	6.0	3.8	1	12	452	463	452	475	0.89

Sequence Information

Coding Sequence: atgtcGGATATGGAACTGAATAAAAGATATCCCTTGATTCACGAAGAAAGTAACCCTTTCATTGAAGAATGGAAACGCTGGTGTCGGCTCTGTGCAAAAGCTGATATACAATGTATTAATGTTTTATCAGGACACTATATGCAATCTACACTCGCAAGTGATAATTGTAACTCTTTAAACATACTTGCTGTTATAGAAGAATTTTTTCACGTACAAattaagGAAGATGAGAAGCTCTCACCTTTTGTATGCACTGTATGTTACGATGTGGTAACATCATTTGTTAGATTTAATGATAACATTAAAAAGGTTCAGCAATTCTACGATGAGCTTTTGCATAGCGATGATAAAACCAAACTCAATTTACCAGCTTTATATGATAAGTATGGTCTATTcagagaagaaaatatttcgacacAAACCAGTACCAAACTTCCGGtggaagaaattttcattgccGATTCGCCCGTGCCGAAGTGTTCTAATTTATcgattcaaataaaaaatgaaagatCTGATGAATTTCCTGcagaagtttttattaaagagtTCGAGAAAAAGGAAGAATTTCAAGATCCCTTCGGTGaagaggaagtatttactgATATGCAAAGCAATTCGCCTGTAAATGAAGAGGAAAATAATAGCCGAAGTGAAGATTTTAATTTGCCAATGGATACTGAAGATACAGATGAAGACGATGAAGTTTGTACAAACAATAGAATTAATAATGACAGCGTGGAGTCGGAAGATTCTACGGAACTATCCAAAGGAGCTGAATATACTTGTAGCATTTGTTTAATGATTTTTCATCGAAGAGGTAACTATTCGGTTCACGTAAAGAAAAAGCATGGTAAACTCGTATGCACGCATTGCCCAAGCTTATTTGATAGTAAACCAAATTTAAAGCAACATATGAAAGATCATCGACAATTATTTCCCTGCCCGCACTGCGATCGAAAGTTCGTAACAAAAGAATACGTATCTcaacacataaaatttattcatgatGATGAACGCCCATTCATTTGCGAAACCTGCGGTGATGCCGTCCGCACGAAAGGACAACTTAAAGAGCATATGTTGACACACACGGACTATTCTCCCTTTGAATGCAAAGAATGTGGAAAAtgctttaaacaaaaacaacgttTGAagAGACACATGCAGATACATGGtgacaaacatatttgtacaGAATGCGGCAAGCAACTGAGCACGCGCGCTACACTAAATAGTCACCTACTAGTGCATTCCGACAAGATGCCACACAAATGTGATTATTGTGGACGACTTTTCAAACGTGctaaaacacttaaaaatcatttaattgcACATACTGGCCTTAGACCTTATTCATGTGACTTTTGTgacaaaacattttcaacgGGACCAAGCTGTCGTTTTCACAAGAAAACTATGCATCCAGTTGAATTGGCTGCCTTAGAGGCATCAGGGgtgaaaacatatacaaaaaatataccaaatttagaTGTTTTGAAGGCCGTATCGCGAACAGCGGAGAATCTTACGCCTCTGGCATCCAAACAAAATGGTTATGCCACATTTGACAGAAAAAAAGAACCGCCAAAAGAGGACGTAGAATCAAAATCGAACGAAACAATCCGGGCAATCGATGCATGA
Protein Sequence: MSDMELNKRYPLIHEESNPFIEEWKRWCRLCAKADIQCINVLSGHYMQSTLASDNCNSLNILAVIEEFFHVQIKEDEKLSPFVCTVCYDVVTSFVRFNDNIKKVQQFYDELLHSDDKTKLNLPALYDKYGLFREENISTQTSTKLPVEEIFIADSPVPKCSNLSIQIKNERSDEFPAEVFIKEFEKKEEFQDPFGEEEVFTDMQSNSPVNEEENNSRSEDFNLPMDTEDTDEDDEVCTNNRINNDSVESEDSTELSKGAEYTCSICLMIFHRRGNYSVHVKKKHGKLVCTHCPSLFDSKPNLKQHMKDHRQLFPCPHCDRKFVTKEYVSQHIKFIHDDERPFICETCGDAVRTKGQLKEHMLTHTDYSPFECKECGKCFKQKQRLKRHMQIHGDKHICTECGKQLSTRATLNSHLLVHSDKMPHKCDYCGRLFKRAKTLKNHLIAHTGLRPYSCDFCDKTFSTGPSCRFHKKTMHPVELAALEASGVKTYTKNIPNLDVLKAVSRTAENLTPLASKQNGYATFDRKKEPPKEDVESKSNETIRAIDA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00191626;
90% Identity: iTF_01564024; iTF_01563176;
80% Identity: -