Ztau009779.1
Basic Information
- Insect
- Zeugodacus tau
- Gene Symbol
- -
- Assembly
- GCA_031772095.1
- Location
- CM062650.1:50334959-50336965[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.02 1.9 9.7 2.6 1 23 234 257 234 257 0.96 2 10 0.00068 0.067 14.3 1.0 1 23 264 287 264 287 0.96 3 10 0.28 28 6.1 2.2 3 23 295 314 294 314 0.95 4 10 0.00017 0.017 16.2 3.6 1 23 319 341 319 341 0.94 5 10 1.4e-06 0.00014 22.8 1.6 2 23 350 371 349 371 0.97 6 10 2.5e-05 0.0025 18.8 1.0 1 23 380 402 380 402 0.98 7 10 1.5e-06 0.00015 22.6 1.6 3 23 409 429 407 429 0.97 8 10 0.0012 0.12 13.5 2.7 1 23 435 457 435 457 0.98 9 10 1e-05 0.001 20.0 0.4 1 23 462 484 462 484 0.97 10 10 0.00037 0.036 15.2 0.7 2 23 490 512 489 512 0.95
Sequence Information
- Coding Sequence
- atgaatTCACCGAGCCGCGCTGAAATCCACTTTGAAGACATGCGTTGCTGTCGTTCCTGCCTCTCAGTGGCTTCGGAAGATGAGCTTGAAGATTACATTGATCTGCTGGAGACTATAACTGTTGACTGTGGAACGATCACATTACTAGAATCGTTCAATAAATGCACTTCATTAAATGTTGTGATAGAAGAATTTGTTATTGAAGGATATCCGTCTTGTCATTATATATGTGGACGTTGTCGGTTAGAACTCAAGCAAGCTAATGAGTTCATAAACCGAGCACAATTAAATAATCAGTTATTAAAGGAACAATATacacataccaaatttttacATTCTCCACTGAGTGATGCTGAGGTACATGAAATCGAAATAAGCAACGAACTTAATTGTGAAGCATCAGAAAATGAGGAGGAATTAAAACCTGTGTGTTTTACAGAGATCGAGTATGAGCAACAGATTTCACCAGTGATGACAGCCAGTGAAATTAATGAGCCACTGGAGGAAGTTATACAAGAAGACAACGAAATCCCAGCAACTACACTAATAAGTGTAGAACGTGTATTTTGTAATGATGGCAAAAATGTAGACAATAATTCGCCGACATCAATGGAAAATAACGAACTAATTATTAGTGCTAACACCAGCCGAAATGAAGAAGACACAGATATTGAAGAAACagataaaacattttttgaatttaaatgcgAGTTTTGTACATGCATATTTGAGTTTCAAAGGGATTTACTGCAACATTACGAAATAGATCACGCGGATCAAACACTTAATTTTCCCTGTGATTTTTGCCAAAATCGATTTGTAACGAAAAATGCGCTGCGGCTGCACCGACGTCAGGTGCATCAGAAAGATGAATATCAGGATTGTGAGCATTGTGGACGTACTGTGCTAAAAACTTTCTATACTGTGCACTTGCGGCGACACAAACAACTCAAATTCTTGTGCAGCAAATGCCcaaAAAGATGTGCTTCACGTTATACGCTCAAAAAACATATGGAATTGCATTCGGACGAACGTGATCGCAATATTGAATGTAACGATTGTGGCAGATGTTTCTATACGCTCGAAAATCTACAATTACATCAAACCACACACATTTCACCCGAAGATCGTGCAATATTCGAATGTACCGTTTGTTCCAAGACATTCTTGCGCAAATCTAATCTCGGTTTACACATGCAAATGCATCGTGGCGAGACAATGGATTGTCCGCATTGTGACAAGAAGTTTGTGCGACGTAAAgatttagaaatacatatacgTTTCCATACTGGCGACTTTCCATACTCATGTTCGATGTGTGAGCGGAAATTCGCCATTAAAGGACATCTGAACTACCATGAGAAGCGGCATCTGGGTGTGCGTTACAAATGCGATGAATGCgagaaaacatttataaatctGGCCGGTTTGCGGCAACATCAGTATGAGCATACGGGTATGCCATTAATGTGTGATGTTTGTCAGCGTGGCTTTGCAACTAAATTTAAGGTTCGCCGTCATTTGCGCAACGTACATAAGCATCTCTTTAAGAAAACTGGCTTCACAGATGCTTTGGCGAAAAAGTACATTATCGTAAAGAACAAGTCGACGCAAGCAATAAAGAAAGTAACCGAGTTAGTCGATGTACCTGAAGACACAATCGAAATGCTGGAAGAACATGCCGAAGACATTCCACTAAATATGCTAACGGTTTAA
- Protein Sequence
- MNSPSRAEIHFEDMRCCRSCLSVASEDELEDYIDLLETITVDCGTITLLESFNKCTSLNVVIEEFVIEGYPSCHYICGRCRLELKQANEFINRAQLNNQLLKEQYTHTKFLHSPLSDAEVHEIEISNELNCEASENEEELKPVCFTEIEYEQQISPVMTASEINEPLEEVIQEDNEIPATTLISVERVFCNDGKNVDNNSPTSMENNELIISANTSRNEEDTDIEETDKTFFEFKCEFCTCIFEFQRDLLQHYEIDHADQTLNFPCDFCQNRFVTKNALRLHRRQVHQKDEYQDCEHCGRTVLKTFYTVHLRRHKQLKFLCSKCPKRCASRYTLKKHMELHSDERDRNIECNDCGRCFYTLENLQLHQTTHISPEDRAIFECTVCSKTFLRKSNLGLHMQMHRGETMDCPHCDKKFVRRKDLEIHIRFHTGDFPYSCSMCERKFAIKGHLNYHEKRHLGVRYKCDECEKTFINLAGLRQHQYEHTGMPLMCDVCQRGFATKFKVRRHLRNVHKHLFKKTGFTDALAKKYIIVKNKSTQAIKKVTELVDVPEDTIEMLEEHAEDIPLNMLTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00192251;
- 90% Identity
- iTF_01563129;
- 80% Identity
- -