Bmin001795.1
Basic Information
- Insect
- Bactrocera minax
- Gene Symbol
- -
- Assembly
- None
- Location
- JAPVRH010001154.1:34934-37000[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.019 1.5 9.7 2.6 1 23 230 253 230 253 0.96 2 10 0.00043 0.033 14.9 0.6 1 23 260 283 260 283 0.96 3 10 0.075 5.8 7.9 0.6 3 23 291 310 289 312 0.82 4 10 0.00025 0.019 15.7 3.2 1 23 315 337 315 337 0.94 5 10 7.2e-06 0.00056 20.5 0.3 2 23 346 367 345 367 0.96 6 10 2.4e-05 0.0019 18.9 1.0 1 23 376 398 376 398 0.98 7 10 1.5e-06 0.00012 22.7 1.6 3 23 405 425 403 425 0.97 8 10 0.00034 0.026 15.2 2.8 1 23 431 453 431 453 0.98 9 10 1e-05 0.00077 20.1 0.4 1 23 458 480 458 480 0.97 10 10 0.00074 0.057 14.2 0.5 2 23 486 508 485 508 0.95
Sequence Information
- Coding Sequence
- ATGACTTCACAAAGTCGCGCTGAAATCTACTTTGAAGACATGAGATGCTGTCGTTCTTGTCTATCCGTGGCTTCAGAAGACGAGCTTGAGGATTATATTGATCTGTTGGAGACATTTACCGCTGAATGTGGAACTATCACATTTTTAGAGTTGTTCAATAAATGTACTTCATTGAATGTTCTGATAgaagattttattattgaaggATATCCGCCTTGCCATTACGTATGTGGACGTTGTCGTTTAGAACTCAAACAAGCTAATGAGTTTATAACCCGAGCTCAATTAAATAATCAGTTATTAAAAGAACAATATACCCGTTCCAAATCTTTACATTCACCAATAAGTGATACCGAGTTACacgaaatcgaaaataaaaacgagTCCATTCGTGAAGAATcagaaaatgatgaaaataaaGAGGAATTAAAAAAGGGGagtTTTACAGATATCGAGTTTGTCAACCAGAATTCACCAGTGATGGATGCCAGTGAGATCAATGAGCCGCCTGAAGAAAATAACGAGATCTTGCCAACAACCCTAATAAGTGTAGAGCGTGTATTTTGTGATGATGAAACAAATGATGTAAATAATTCGCAGATATCAAAGAAATCTATATTAGGCACAAAGAACTCCCGAAACAAACAGGACgcaaatattgaagaaacaGACAAGACAtactttgaatttaaatgcgaGTTTTGCACTTGCATATTCGAGTTTCAAAGAGATCTACTGCAACATTATGAAATCGACCACGctgataaaacacttaattttccCTGCGACTTGTGCCAAAATCGATTTGTAACGAAAAATGCTCTGCGACTCCATCGACGCCAGGTGCATCAGAAAGACGAATACCTGGATTGTGAGGATTGTGGACGTACTGTATTGAAAACATTCTATAATGTGCACTTGAGGCGACATAAACAGCTTAAATTCTTATGTAGCAAATGCCCAAAAAGATGTGCTTCACGTTATACACTCAAAAATCACATGGAATTACACTCCGATGAGCGTGATCGCAATATTGAATGTATGGATTGCGGTAAACGTTTTTATACACTTGAAAATCTCCAATTACATCAAACAATACACATTTCCCCCGAAGATAGAGCAGTTTTTGAATGTACTGTTTGTTCCAAAACTTTCTTGCGCAAATCTAATCTTGgtttgcatatgcaaatgcatCGTGGCGAGACTATGGACTGCCCACATTGCGACAAAAAGTTTGTAAGGCGTAAGGATCTAGAAATACATATTCGTTTCCATACTGGGGACTTTCCATACTCATGTTCCATGTGTGACCGGAAATTCGCCATTAAAGGACATCTTAACTACCATGAGAAACGTCATCTGGGTGTGCGTTACAAATGTGACGAATGcgagaaaacatttataaatctGGCTGGCTTGCGACAACATCAGTATGAACATACGGGTATGCCATTAATGTGTGGTGTTTGCCAGCGTGGCTTTCCAACTAAATTTAAGGTACGACGTCATTTGCGCAACGtacataaaaatctttttaaaaaaacggGCTACACGGAAGCATTAGCAAAAAAGTACATAATCATAACGAAAACGTCAAATCAAGCAATAAAGGAAGTAACCGAGTTAGTAGATGTACCTGAAGACACAATCGAAATGCTGGAAGAGCATGCCCAAGACATTCCATTGAATATGCTATCTGCTTAG
- Protein Sequence
- MTSQSRAEIYFEDMRCCRSCLSVASEDELEDYIDLLETFTAECGTITFLELFNKCTSLNVLIEDFIIEGYPPCHYVCGRCRLELKQANEFITRAQLNNQLLKEQYTRSKSLHSPISDTELHEIENKNESIREESENDENKEELKKGSFTDIEFVNQNSPVMDASEINEPPEENNEILPTTLISVERVFCDDETNDVNNSQISKKSILGTKNSRNKQDANIEETDKTYFEFKCEFCTCIFEFQRDLLQHYEIDHADKTLNFPCDLCQNRFVTKNALRLHRRQVHQKDEYLDCEDCGRTVLKTFYNVHLRRHKQLKFLCSKCPKRCASRYTLKNHMELHSDERDRNIECMDCGKRFYTLENLQLHQTIHISPEDRAVFECTVCSKTFLRKSNLGLHMQMHRGETMDCPHCDKKFVRRKDLEIHIRFHTGDFPYSCSMCDRKFAIKGHLNYHEKRHLGVRYKCDECEKTFINLAGLRQHQYEHTGMPLMCGVCQRGFPTKFKVRRHLRNVHKNLFKKTGYTEALAKKYIIITKTSNQAIKEVTELVDVPEDTIEMLEEHAQDIPLNMLSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01563129; iTF_01563979;
- 90% Identity
- -
- 80% Identity
- -