Basic Information

Insect: Zeugodacus tau
Gene Symbol: -
Assembly: GCA_031772095.1
Location: CM062650.1:50344872-50348187[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.47 46 5.4 3.3 1 23 175 198 175 198 0.90

2 17 0.1 10 7.4 0.0 3 23 204 225 202 225 0.90

3 17 0.011 1.1 10.5 0.8 1 23 231 253 231 253 0.97

4 17 0.033 3.3 9.0 0.0 1 23 276 298 276 298 0.96

5 17 0.0034 0.34 12.1 0.8 1 23 300 323 300 323 0.96

6 17 6 5.9e+02 1.9 0.2 2 20 425 443 424 445 0.87

7 17 0.0012 0.12 13.5 1.5 1 23 539 562 539 562 0.97

8 17 1.1 1.1e+02 4.3 0.7 2 23 572 593 571 593 0.92

9 17 0.0048 0.47 11.7 0.6 2 23 600 621 600 621 0.95

10 17 0.00014 0.014 16.5 0.1 2 23 628 649 627 649 0.96

11 17 0.0042 0.41 11.8 2.3 1 23 743 766 743 766 0.97

12 17 1.7 1.7e+02 3.6 0.6 2 23 776 797 775 797 0.89

13 17 0.0048 0.47 11.7 0.6 2 23 804 825 804 825 0.95

14 17 1.7e-05 0.0017 19.3 0.2 2 23 832 853 831 853 0.97

15 17 0.0042 0.41 11.8 3.9 1 23 859 881 859 881 0.97

16 17 5.3e-05 0.0052 17.8 1.5 2 23 887 908 886 908 0.92

17 17 0.0072 0.72 11.1 1.6 1 23 914 937 914 937 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.47	46	5.4	3.3	1	23	175	198	175	198	0.90
2	17	0.1	10	7.4	0.0	3	23	204	225	202	225	0.90
3	17	0.011	1.1	10.5	0.8	1	23	231	253	231	253	0.97
4	17	0.033	3.3	9.0	0.0	1	23	276	298	276	298	0.96
5	17	0.0034	0.34	12.1	0.8	1	23	300	323	300	323	0.96
6	17	6	5.9e+02	1.9	0.2	2	20	425	443	424	445	0.87
7	17	0.0012	0.12	13.5	1.5	1	23	539	562	539	562	0.97
8	17	1.1	1.1e+02	4.3	0.7	2	23	572	593	571	593	0.92
9	17	0.0048	0.47	11.7	0.6	2	23	600	621	600	621	0.95
10	17	0.00014	0.014	16.5	0.1	2	23	628	649	627	649	0.96
11	17	0.0042	0.41	11.8	2.3	1	23	743	766	743	766	0.97
12	17	1.7	1.7e+02	3.6	0.6	2	23	776	797	775	797	0.89
13	17	0.0048	0.47	11.7	0.6	2	23	804	825	804	825	0.95
14	17	1.7e-05	0.0017	19.3	0.2	2	23	832	853	831	853	0.97
15	17	0.0042	0.41	11.8	3.9	1	23	859	881	859	881	0.97
16	17	5.3e-05	0.0052	17.8	1.5	2	23	887	908	886	908	0.92
17	17	0.0072	0.72	11.1	1.6	1	23	914	937	914	937	0.97

Sequence Information

Coding Sequence: atgcaCTGTCGTGCCTGTATGCAAGTAGATTGTGAGAAGGTTGTGGATATGAATTATGCCACATCTGGAGATGATGGTAAAACTTTATACGATTACTTCAATGAGTGCACGCAACTACAAGCAACATCGAATGATGAACTTCCACAAATATTATGCAGTACCTGCATAGAAGATCTATATGATGcctataattttataaacaggGCTCGTACATCAGATGGAGAACTTAAAAAGTTGCTGACATTACAAAAAGCCGACACAGACATATATACTACTACTCAAACTACACAGTATGTAGTGGAATGCATAAATGATCCCTTAGCGTCGCCGGAACGACAAATTGCCGTAACTGAAACTTTCATCACTGCAGAGGGCGCTGAAATGGCTATACCCGCCtcagaaataaaaatagagcTGGAGCTGCCTGAAGATTTTGATAACACAGTTGAGGATCATGTTGTAAAAAGTTACTCCGATTCTTCACTACAGGGTAACAGTGACGTTGTCATGCCTGGAGTAACTCATTCTTGTGAATTATGCGATTGTACTTATTTAACGCAGAAGGAACTAAAAGATCATATATTTGATATGCACAAGTCTGATATAATCTGCATGAAATGTCCGAAAGTATATGAGCTTCCTACGGAACTACGGCTACATGAATCACTTGTACATAGCACGGAAACATCATTTCAATGTGTATGGTGTAAGGAATCTTTTCAACGTGAAGAACTACCTAAACACATACGGAAGAAGCATAgacattattatttaaaatattttccgcgCATAAGAATCCATTCTAATAATGACAAGACGAATAGTTTTCGTTGTGATGACTGTTATATAGCCTTTCCATCCATACTAGAGTTAGCCTCCCATGTAAAGGATCATAAATTTGACTGTCCATTATGTCTGATGAGCTTTACAAAATATGGTTCGTATCGGGCGCATGTTAAACGCACACATAACCATTCGATAAGTAGTTTAAAAGCTGCGGTAGAAACTTTGCTTGTAGAACCTTTGATGGAATTTCCAAATGGAACTATTTCTGTAGAAAAATCATGTAAATCTCCAAATCCATCGTTTGAGGAAGCGCAAATGGAAATAGTAAAGGAAGTCGCACCAGTGACCATCACAGAACCACAAGATACCTCATTGCAGACCAAAGATAAACAGACAAATGTAGTCACGACAAATGACTCTGTAAATAATTGTACAGGAAGCTTATTTAGATCGTTAGTTGTCGATGAAGGTGAAGATAAACCAATTGAATGTAAACCTTGCAACAAAAGCTCTACAAGATTAGGCTCAAACAATTATCACAAAATAACTGAATCAACCGATATAAATGATATGGAAGAAACTACGGATAATGAAATTGTGGATATTCTGGATATTGAAGCATATAAAGCGTCGATAGCTAAAACAGAATCGGAACAGAGCCCCTCACTTGCAGATTTAGCGTGGGAAGCAGAATCCAAAAAAGTTGAATCcgatgaaaatattttaggaaGTGAAGAAAATAACGTTTTTGATCAAGTGCCAAAGGAATCggttaaaaagcaacaacaaaagcagaaaaCTATTCCACAGTCAAAGGGAAAAAAGGGgtatttttgttcattttgcCCACGTGTGTTAACTTCAAATAGGTCATTGCAAACACACGAAAAAACTCAGCATCTCGGTAGAAAAAAAGATATTATGAAAGAGTGTCCCATCTGtcggaaaaaaatgtatacggACTACATTAAGAAACATATTAGAATGGTGCACATAGGGGAACGTAATAACGTTTGCGATATTTGTGGCGGCAGATACAAGACATTTAATACACTCCAACGGCACAAACTGTTGCATATTGCAGATCGCCAATGGCAATGCAGTGCATGTGATATGAAATTTGCGGAAAAATCTGCActcaatatacatatgcgtCTTCATACAGGCGAAATGCCCTTAAATGATATGGAAGAAACTACGGATAATGAAATTGTGGATATTCTGGATATTGAAGCATATAAAGCGTCGATAGCTAAAAAAGAATCGGAGGAGATCCCCTCACTTGCAGATGTTACGTGGGAAGCTGAATCTAAAAAGGTTGAATCcgatgaaaatattttagaaagtgaACAAAATGTTGTTGATCAAGTGCCAAAGGAATCGGTTAAAAAggaacaacaaacaaagaaaaccaTTCCACAGTCAAAGGGAAAAAAGGGGTATTTCTGTTCATTTTGCTCACGTGTGTTAACTTCCAATAGGTCGTTGCAAACACACGAAAAAACTCAGCATCTCGGTAGAAAAAAAGATATTATGAAAGAGTGTCCCATCTgtcagaaaaaaatgtatatggacTACATTAAGAAACATATTAGAAATGTACACGTAGGGGAACGTAATAACGTTTGCGATATATGTGGCGGCAGATACAAGACATTTAATACACTCCAACGGCACAAACTGTTGCATATGGCTGATCGCAAATGGCAATGTAGTGCATGTGATAAGAAATTTGCGGAAAAATCTGCACTCAATATACATATGCGCCTTCACACAGGCGAAAAGCCATTTGCTTGTCATCTATGTGACCGACGATTTCGCATAGGAAGTCATCTCACCTATCATTTAGAGAGACATGctaatataaagaaaaagtgCAACGTTTGTGGCAAAGAATTCACCAGCGCTACATCATTGCGAAAACACTCATTCCTGCATACTGGCGATATGCCGTATAAATGCACTGATTGCGACTATGAAACGGCTAAACGTGAATATTTTATAAGCCATACGCTGCGAAAACATGACCGAAATATGACTGAagatgaattatttttaatgttcaaAAGGAATACTGGTGAAACGCCTCgcgtaaaaaattttgaatctctaaacaaattatttgaaaattcggAAAAGTCAGATCATGCAAATTAA
Protein Sequence: MHCRACMQVDCEKVVDMNYATSGDDGKTLYDYFNECTQLQATSNDELPQILCSTCIEDLYDAYNFINRARTSDGELKKLLTLQKADTDIYTTTQTTQYVVECINDPLASPERQIAVTETFITAEGAEMAIPASEIKIELELPEDFDNTVEDHVVKSYSDSSLQGNSDVVMPGVTHSCELCDCTYLTQKELKDHIFDMHKSDIICMKCPKVYELPTELRLHESLVHSTETSFQCVWCKESFQREELPKHIRKKHRHYYLKYFPRIRIHSNNDKTNSFRCDDCYIAFPSILELASHVKDHKFDCPLCLMSFTKYGSYRAHVKRTHNHSISSLKAAVETLLVEPLMEFPNGTISVEKSCKSPNPSFEEAQMEIVKEVAPVTITEPQDTSLQTKDKQTNVVTTNDSVNNCTGSLFRSLVVDEGEDKPIECKPCNKSSTRLGSNNYHKITESTDINDMEETTDNEIVDILDIEAYKASIAKTESEQSPSLADLAWEAESKKVESDENILGSEENNVFDQVPKESVKKQQQKQKTIPQSKGKKGYFCSFCPRVLTSNRSLQTHEKTQHLGRKKDIMKECPICRKKMYTDYIKKHIRMVHIGERNNVCDICGGRYKTFNTLQRHKLLHIADRQWQCSACDMKFAEKSALNIHMRLHTGEMPLNDMEETTDNEIVDILDIEAYKASIAKKESEEIPSLADVTWEAESKKVESDENILESEQNVVDQVPKESVKKEQQTKKTIPQSKGKKGYFCSFCSRVLTSNRSLQTHEKTQHLGRKKDIMKECPICQKKMYMDYIKKHIRNVHVGERNNVCDICGGRYKTFNTLQRHKLLHMADRKWQCSACDKKFAEKSALNIHMRLHTGEKPFACHLCDRRFRIGSHLTYHLERHANIKKKCNVCGKEFTSATSLRKHSFLHTGDMPYKCTDCDYETAKREYFISHTLRKHDRNMTEDELFLMFKRNTGETPRVKNFESLNKLFENSEKSDHAN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01563116;
90% Identity: iTF_01563116;
80% Identity: -