Basic Information

Gene Symbol
hang_1
Assembly
GCA_031772095.1
Location
CM062650.1:57742171-57758485[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 0.067 6.6 8.1 1.3 3 23 439 460 438 460 0.93
2 20 0.035 3.5 8.9 3.4 3 22 566 585 564 585 0.90
3 20 0.053 5.2 8.4 1.2 1 22 660 681 660 683 0.90
4 20 1.7 1.7e+02 3.6 0.6 2 21 695 714 694 715 0.93
5 20 0.96 95 4.4 0.6 2 23 723 745 722 745 0.88
6 20 0.0028 0.27 12.4 0.2 3 23 810 831 809 831 0.96
7 20 6.7e-05 0.0066 17.5 0.1 1 23 839 862 839 862 0.96
8 20 1.8e-05 0.0018 19.3 0.1 2 23 951 972 950 972 0.97
9 20 0.18 18 6.7 3.2 2 23 1036 1058 1035 1058 0.94
10 20 0.0046 0.46 11.7 0.2 2 23 1067 1089 1066 1089 0.95
11 20 0.00091 0.09 13.9 0.2 1 23 1102 1125 1102 1125 0.98
12 20 0.00014 0.014 16.5 1.1 1 23 1188 1210 1188 1210 0.99
13 20 0.0022 0.22 12.7 0.9 1 23 1218 1241 1218 1241 0.96
14 20 0.018 1.8 9.8 0.2 2 20 1249 1267 1248 1267 0.95
15 20 3.6e-05 0.0036 18.3 0.3 3 23 1339 1359 1338 1359 0.98
16 20 5.9e-05 0.0058 17.7 0.7 1 23 1394 1416 1394 1416 0.97
17 20 0.00015 0.015 16.4 0.5 2 23 1477 1499 1476 1499 0.92
18 20 0.83 82 4.6 0.2 2 19 1519 1536 1518 1538 0.93
19 20 0.066 6.6 8.1 0.7 3 23 1554 1574 1554 1574 0.98
20 20 0.00093 0.092 13.9 1.0 1 23 1833 1855 1833 1855 0.98

Sequence Information

Coding Sequence
ATGTCGGACGGCAGCCCAGTGCGTGCGCGACAAAATTGCTGTCGCCTCTGCTTGGCTCCGGGCAGTGAATGCATATCCATATTAAACAGCTATGCGGCGGACAAGGAACCGTTGGCTACTAAGATACAGAACTGCGTCAGCATCAAGATAAACCCCGAAGATCATCTATCATTGCGCATTTGCCATGCGTGCATCAGTTACCTGAATTCCTGGCAGAGTTTCAAAAATCGCTGTCTCGCCTCACAAAGTAAGCAACGCAGCTGGTTGGACACAAATAAGCGTCAGCAGTTGCTCGACAACAATGTCAGCATATCTACAATTGGTGCCGATGGTATTACACAACAAGCGGACGAGAGCGGACAACACACGGCGCCGAGCCTGTCCTCATCGATTTTGGATGGAATTTCGTCGTTGAAGAAACGCAAATCTTTAACTGTTTATGTGAGTCCTAAAGAAAACCCCAcagctactactactactactaccatCACTACTAGTACTACAACTACTTGTACTAGTACAACTAGCATCACGAGTGGCAGCACTGTTGCTGCCACCACTACTACCAATACAACAATTACTCCTACTAGTAAACAGCAGTTGTTGGCAACCACAGCAGCAGCGAAACAAACGCCAGCACAGCAATTGCTTCTGGAGCCACATTTACCTTATAGAAAATACAGTCGTCAATTTGCGCCCACAGCTGGCTTGATAGCAGCTGCCGCGGTGGGTCGCGCGCCAACGGCGACTTTGACGGTGGCACCAGTGCAAGCGGCACCGCGTCGCGCTCGACATTATCATCGTAGtcagcagcagcggcaacagcaacagcaacatcatcagcaacaacaaaaagaattgCAACAACATGTACAAGCCGAAGTGGAAAAGTATCAgaggcaacagcaacagcagcagcaattgtTGCTAGAGCAGCAAAAGTTgttggaacaacaacaactccaacaatcgCATACACAATCGTTGCCACAACAAGCACAACCAATTGCCGTTGCTGCTGCCGCTTCCGTCACAACATGTCAGAGTGCCGCACAGCAATTGCGTTTATTTAGACGTTACACGTACAATAACCCATTGCCAGCTGTAGATATAAAAGATGAGCCGATAGATCCCGATGATGAATACAACACCAAACAGCATGATGAGTCCGATGATATGGTTGATCCGACACTCTTCTTGGAACGCACCGAAGTGGAGTGTGACGAAGGGCTCATGGAGCACACGCCCTATCACTACGAACAACCGCGTCCGCACATTGAGCTAGCCGCACTGGTGGACACCAAAGAGGCATCGTGTCGCGCTTGCAATCTGAAATTCTCCACACGCGCCAATGCACGTCGCCACGAACGTAATTTGCATCCAAATCTCTTCGAGCTTTCAACATCGACACCAAAAAATATGCCCGTAACCACACCCAGACCCGAATTGGTAGCAGCACTCGAATTGCAACGCGCCTCAGCGGCCGCCGTAGCCGCTGCGGAGGCGTCCAAAGCTGCATCTGGTTTGATATCACCACTCAAGTATCGGCAGCACATCATGGACGCGGTCAATAAGTGTGAAATCGCTGGTTTCGACTATGAACATCCGGAGAAGTATCAACACCATTTAACCGATGAGAAGATCGTTTTTCTACAACAGAACGATGACTTTTTGCGCCAATATCAAAATATGACTTGTCGTTGCTGCAACAAAAGCTACTCGACCTATAAGAATTTCATGGCACACATGCGCAAGAAATATCTCACCTTGCCGCGCAATCTCTGCTTCAATTGCCTGAAATTGAACGACTCGAAGGCGTTGTTCATCTCGCATTTGAAGCGACGCAATTGCATCAACTTGTATCGCGTGTTGCATGCGCTCATGGCGAAGGACAGCAATTTCGCCGCCGCAGTGACGGCCACAGCGGCCGCCGTGCCGGACAAGTTGCGCGCCAAGGAGCTGCTCGTCAACAAGATGTACGAGTGCAAATTGTGCCCGAAGAAGTATCGCCTGAAGTTGGAGTTCCGTTCGCATGTCTATGACGAGCACGCCGACGTGCAACGCAAGGatataatgcaaaaacaatgtTGCTACTGTGGCTTGGAGTTGGAAGATCCGGCCGAACGCAAACGTCACTACAACAACATGGATTGTATTGTGTCGCTGCGCTGCGTGACATGCGATGCCAAATTTGATAATAATCAGAAATTCCTCGATCATGTGTACGAGAAGCATTTGGCCGGTTTCGGCGACCAAACATCGACATCGTTGCAAAATATTAGCGCTATGAGCACAGAGAATTCGCCGGGCAAAAAGTCAAACATCGGCTTGGGTGgcGCCTCCTCCACCGATGAGTCACGCAGCAGTCATCATGCCAACTCCGCCAATCAACCGAAATCACAATATTTCTCACGTATGCCACAAGCTTGCCCCATATGCGATCAGcagtacaacaactacaacaatgtgTTGCGTCACATGGAATCGAAACATCCCGATCAATTGCCACAGACATACAAGTGCGTCAAATGCGGCATTGGCTATCCGCGTCTATCCAATTTGCGCGAGCACATGGTCAGCGTGCATTCGGCGGATAAGACGCGTCACTCGGGCTTTGAGTATATTGTGAATGCGGATGCGGTTAAAATTGCCTACGGCACACCGCAGAACATCTACACGGGACGCTATGATTATGTGATGAAGGACTTGATGTCGATAACGAATGGCGGCTCAATTGCTGATGACGATGAGAACTCCAGCGAAAATCCAACGAAGAAAATGCGCACAGACACCGGTGCCGCTGTGACAACCAGCACTGCATCCACTGGCAGCGGATACAACAATCTGAAGGAATGTCCCATTTGCAATGCCGTCTTCAGCAATAATATTGGACTCTCGAATCACATGCGTTCGCATAGTGCCGCAGCACAAAATAATTCGTTAACACCGGGAGCGCTCACCGCCAACAAATCCGCACCGAGCGGACTCACCATCACACCAGCGAAACCCACCACACCACCGGCCATGCAACACCAGACCGCCGTGCAGAAGGCGATCTTCAAGCGCAGCTTGGAACAGGCAGCCGATCGTCGCTTCCGACGCATGCGCTGTCGTCTGTGTCAGCGTCGTTTCTCATCGAAGAAATCGTACCGCTTCCACATGCTCAACGACCATCAAATACGCAATGTACAGTTTATTAAGTGCAAATTATGCGATGCGGAATTCGCTTACGAGAAGGGCTTGAAGGTGCACATGTTCAAGATACACAATACACTGATGAAGGACGAGATGATCGAGAAGCAATTCGAGTGTGATATCTGTTCGATTGTGTATCGCAGTGAACCACAGCTGCAGCTGCACAAGAAGACTGTGCacggcggtggcggcggcgccGAACAGGCCGATACTACATTTGATGACAGCTTGGCTGGTGGTGCTCGTGGCGCTGATATCAGTTCGGCGGCAAATCCGGCCGATCGCTCGGGCCTGTCGACGCCGGTAAGTAATGTGGGCGCCGAACGTGGCGCGATGGACAGCTCAACGAGCGGGCCGCTCTACTGGTACCAATGCAAGTACTGTCCGTCGAACTTCAATACGAACAAGAAGTTGGCCATACACATCAACTCGCATGACGAGTTCGATTCGAATGACTATTCGTGCAAGGATTGCGGTAATGTGTATAGCGGACGCAAGAGTTTATGGGTGCATCGCTACAAGAAGCATCCACAATTCCCCGAACCGTCGGAGTGTGTGCTCTGCAAGAAGGTCTTCTTCGATAGTCAGATGTTGAAGAATCACATACCGACCTGTAATCGCAAGCCGATCAACGCATCGGGCGCTGTAGCCGAAAGCGCTGGACCGCCACCCATCTACAAGCATAAAACAGgcgatgacgatgacgatgcaTCACACGATGCTGGCGGTGTTATAACGACAAGTGCTTTGGGTGGTGGTGAACTGGAGATCACACCGATACCGGCCAGTGGCATGAAGATTAAATTACCCGAAGTGGCTTGCACCATGTGTGGCCAACGTTTCACCGATCAGGAATTATTcgccaaacacatacaaatgcatgaAATGGAATTGTATACGGACAATCCGTTGGCGGCCATGTTTGATACTGGTCCAGCGGATCCGAATCAATTCTATTTGGATCGGGTGAATGATAATGGCGAATACGCCTGCGATTTGTGTAATAAAACATTTACACAAATGACTGCACTTAAAGTGCATCGTAAATGGCATTTCAGAGGTGATAGCAAACAGAACCTAGCCGACGTGGATCCATCGGCCAGTGCAGCAGCGAACAACCCATCATCCCAGATCCAGATCAACCATCAACATCCACTGGGATTACAAGCGGTGGGCCTTATGCCCAACCCCTATCATCAATCTTTAAAATCCCAGAAACGCAAACGCGAACTTAAATGCGAATACTGCCCGTCCACcttcatcagcaacaacaatctgCGTCGTCACATTTACGAATTGCATAAGGAGGAGATTGGCAATTTGCCGGTGCCACCGAAAATCGATATCGACCCCTATTTGCAATGCCGTCGCTGCCAGTTGAAATTCGAAACGAAGAACGATTGGATTGCGCATAAGGTGAACGATGCGCGCGTTACAAAGCCATTTGGACCCTTCCAGTGGGGCTGTGACTTGTGCGGTGCTTATGTGTCGCGCAAAGAGAAGCTGatcaatcacatacataatcATCTGAAGGAGAAGGAGATTGTGCCGGTGGaggaacagcagcagcagcagcagacacATGATCAAAATCAGAATCGTGCAGTAAAGTCGAAGGTGCCGACACCGAGTGTTGTGAAGCCGTTATCAATTAAAGTCAAATCTGATGGTGAGTTGAAGGTGAAGCAAGAAGAAGATGACGAAGAAGACGAGAAGGAGGACTTACATGAGGGTGTTAAGGAAGAGGATGAGGAGTCCGATGAGGATGATGGTGATGGCGGTGAGGTGGATGGTGAAGTGGACGAGGGTGAGCAGCATGAAAATGTGGACGGACGACTTCATATGGACACCGATGATGAAGCTGATGAGGATGCTTCCGAAGAGGAGGTGGAAGAAGATGAGGAATACGAAGTTATGGGCGAAATTACACAAATGGATATGACGGAGCACGCTGACGGTGAGGTGGCCGAAGCGGACGAAGATGACGCCGATGACGCTGATGATGCCGAAGACGGTGTGGAAGATGCCGATGACGTTGATATGGATAACGAAGAAGACTCCAATGATCGTACTATTGCCGCACCAAATGGTAGTGCGTATCAGCGCGTGCCAACTGCCGCAACACAAGTCACCATCGAAACGAATCGCATATCGACAGACACAACCGAAGATTCGTCGCCGTCGTATGATGAGGATGACGATGATGAGAACGACAATGATTCGGATGATGAGAGTGATGCGGAGAGCGGCGATAGTTCGTCGCAGGCATCGAAGACGCCAGCGCCGGCGCCGAAAGCACGCTTTTCGTGCGATCTCTGTCGCGTCTTCTTCGATTCGCAACAAGAGCTGCAGAAGCATGTGAAAATGCATTTCCTTAACGGGCCCGGTTCGGTGTCGTTAACCGAAATCAAGCCACGCACGGGCAACAAGTcgagccgcagcagcagcagtgacgTGGTGGCGGTGTAG
Protein Sequence
MSDGSPVRARQNCCRLCLAPGSECISILNSYAADKEPLATKIQNCVSIKINPEDHLSLRICHACISYLNSWQSFKNRCLASQSKQRSWLDTNKRQQLLDNNVSISTIGADGITQQADESGQHTAPSLSSSILDGISSLKKRKSLTVYVSPKENPTATTTTTTITTSTTTTCTSTTSITSGSTVAATTTTNTTITPTSKQQLLATTAAAKQTPAQQLLLEPHLPYRKYSRQFAPTAGLIAAAAVGRAPTATLTVAPVQAAPRRARHYHRSQQQRQQQQQHHQQQQKELQQHVQAEVEKYQRQQQQQQQLLLEQQKLLEQQQLQQSHTQSLPQQAQPIAVAAAASVTTCQSAAQQLRLFRRYTYNNPLPAVDIKDEPIDPDDEYNTKQHDESDDMVDPTLFLERTEVECDEGLMEHTPYHYEQPRPHIELAALVDTKEASCRACNLKFSTRANARRHERNLHPNLFELSTSTPKNMPVTTPRPELVAALELQRASAAAVAAAEASKAASGLISPLKYRQHIMDAVNKCEIAGFDYEHPEKYQHHLTDEKIVFLQQNDDFLRQYQNMTCRCCNKSYSTYKNFMAHMRKKYLTLPRNLCFNCLKLNDSKALFISHLKRRNCINLYRVLHALMAKDSNFAAAVTATAAAVPDKLRAKELLVNKMYECKLCPKKYRLKLEFRSHVYDEHADVQRKDIMQKQCCYCGLELEDPAERKRHYNNMDCIVSLRCVTCDAKFDNNQKFLDHVYEKHLAGFGDQTSTSLQNISAMSTENSPGKKSNIGLGGASSTDESRSSHHANSANQPKSQYFSRMPQACPICDQQYNNYNNVLRHMESKHPDQLPQTYKCVKCGIGYPRLSNLREHMVSVHSADKTRHSGFEYIVNADAVKIAYGTPQNIYTGRYDYVMKDLMSITNGGSIADDDENSSENPTKKMRTDTGAAVTTSTASTGSGYNNLKECPICNAVFSNNIGLSNHMRSHSAAAQNNSLTPGALTANKSAPSGLTITPAKPTTPPAMQHQTAVQKAIFKRSLEQAADRRFRRMRCRLCQRRFSSKKSYRFHMLNDHQIRNVQFIKCKLCDAEFAYEKGLKVHMFKIHNTLMKDEMIEKQFECDICSIVYRSEPQLQLHKKTVHGGGGGAEQADTTFDDSLAGGARGADISSAANPADRSGLSTPVSNVGAERGAMDSSTSGPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQFPEPSECVLCKKVFFDSQMLKNHIPTCNRKPINASGAVAESAGPPPIYKHKTGDDDDDASHDAGGVITTSALGGGELEITPIPASGMKIKLPEVACTMCGQRFTDQELFAKHIQMHEMELYTDNPLAAMFDTGPADPNQFYLDRVNDNGEYACDLCNKTFTQMTALKVHRKWHFRGDSKQNLADVDPSASAAANNPSSQIQINHQHPLGLQAVGLMPNPYHQSLKSQKRKRELKCEYCPSTFISNNNLRRHIYELHKEEIGNLPVPPKIDIDPYLQCRRCQLKFETKNDWIAHKVNDARVTKPFGPFQWGCDLCGAYVSRKEKLINHIHNHLKEKEIVPVEEQQQQQQTHDQNQNRAVKSKVPTPSVVKPLSIKVKSDGELKVKQEEDDEEDEKEDLHEGVKEEDEESDEDDGDGGEVDGEVDEGEQHENVDGRLHMDTDDEADEDASEEEVEEDEEYEVMGEITQMDMTEHADGEVAEADEDDADDADDAEDGVEDADDVDMDNEEDSNDRTIAAPNGSAYQRVPTAATQVTIETNRISTDTTEDSSPSYDEDDDDENDNDSDDESDAESGDSSSQASKTPAPAPKARFSCDLCRVFFDSQQELQKHVKMHFLNGPGSVSLTEIKPRTGNKSSRSSSSDVVAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_01563084;
80% Identity
-