Bole008764.1
Basic Information
- Insect
- Bactrocera oleae
- Gene Symbol
- hang
- Assembly
- GCA_001188975.4
- Location
- LGAM02036686.1:594984-613811[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.049 4.2 8.2 1.3 3 23 228 249 227 249 0.93 2 20 0.032 2.8 8.8 3.6 3 22 355 374 353 374 0.90 3 20 0.18 15 6.5 0.9 1 22 449 470 449 472 0.90 4 20 1.3 1.1e+02 3.8 0.6 2 21 484 503 483 504 0.93 5 20 2.7 2.4e+02 2.7 1.6 2 23 512 534 511 534 0.88 6 20 0.002 0.17 12.6 0.2 3 23 599 620 598 620 0.96 7 20 4.8e-05 0.0041 17.7 0.1 1 23 628 651 628 651 0.96 8 20 1.3e-05 0.0012 19.4 0.1 2 23 743 764 742 764 0.97 9 20 0.13 11 6.9 3.2 2 23 831 853 830 853 0.94 10 20 0.0034 0.29 11.9 0.2 2 23 862 884 861 884 0.95 11 20 0.00059 0.051 14.3 0.7 1 23 897 920 897 920 0.98 12 20 0.0001 0.0089 16.6 1.1 1 23 984 1006 984 1006 0.99 13 20 0.0016 0.14 12.9 0.9 1 23 1014 1037 1014 1037 0.96 14 20 0.022 1.9 9.3 0.1 2 20 1045 1063 1044 1063 0.95 15 20 1.3e-05 0.0011 19.5 0.2 3 23 1135 1155 1134 1155 0.98 16 20 4.3e-05 0.0037 17.8 0.7 1 23 1190 1212 1190 1212 0.97 17 20 0.00011 0.0094 16.6 0.5 2 23 1272 1294 1271 1294 0.92 18 20 0.32 28 5.6 0.2 2 19 1314 1331 1313 1333 0.93 19 20 0.048 4.2 8.2 0.7 3 23 1349 1369 1349 1369 0.98 20 20 0.00068 0.058 14.1 1.0 1 23 1628 1650 1628 1650 0.98
Sequence Information
- Coding Sequence
- ATGTCGGACGGCAGTCCAGTGCGTGCGCGACAAAATTGCTGTCGCCTCTGCTTGGCTCCGGGCAGTGAATGCATATCCATATTAAACAGCTATGCGGCGGACAAGGAACCGTTGGCTACTAAGATACAGAACTGCGTCAGCATCAAGATAAATCCCGAAGATCACCTATCGCTGCGCATTTGTCATGCGTGCATCAGTTACCTGAATTCCTGGCAGAGTTTCAAGAATCGCTGCCTTGCCTCACAAAACAAGCAACGCAGTTGGTTGGACACGACTAAACGTCAACAATTGCTCGACAACAATGTCAGCATATCAACGATTGGTGCAGATGGCACCGGCCAACAtcagcaacagcagcaccaAGCGGACGAGAATGAACAGCACACAACGCCGAGCTTGGCATCATCGATTTTGGATGGAATTTCGTCGTTGAAGAAACGAAAATCTTTAACTGTTTATCCATTGCCAGCTGTAGAAATAAAAGATGAGCCGATGGATCCCGATGATGAATACAACACCAAACAGCATGACGAATCCGATGACATGGTTGACCCAACACTCTTCTTAGAACGCACCGAAGAGGAGGGTGACGAGTCGCTCATGGAACAAATTCCCTACCACTATGAGCAACCGCGACCGCCCATCGAGCTGGCCACATTGGTGGATACCAAAGAGGCGTCCTGTCGCGCCTGCAATCTGAAATTCTCCACACGCGCCAACGCACGCCGCCACGAACGCAATCTGCATCCAAATCTCTTCGAGCTCTCAACATCGACACCAAACAACATGCCGGTGACCAAACCCACACCCGCATTGGCAGCCGCACTAGAGTTGCAACGCGCCACAGCGGCCGCTGTAGCCGCGGCTGAAGCGTCGAACGCCGCTTCTGGCATGATAACACCGCTCAAGTACCGACAGCAAATCGTGAACGCATTCAATAAGTGTGAAATCGGCGGTTACGACTATGAGCATCCGGAGAAGTATCAACACCATTTGACCGACGAGAAGATCGTTTTCCTACAGCAGAACGATGAATTTTTGCGCCAATATCAGAATATGACTTGTCGTTGTTGTAATAAAACCTATACGACCTATAAGAATTTCATGGCACACATGCGCAAGAAATATCTAGCATTGCCGCGCAATCTCTGCTTCAATTGCCTGAAGCTGAACGACTCGAAGGCTTTGTTTATCTCGCATTTGAAGCGCCGCAATTGCATCAACTTGTACAAAGTGTTGCATGCGCTCATGGCGAAGGACAACAATTTCGCCGCTGCTGTGACTGCCACAGCGGCCGCAGTGCCGGACAAGTTGCGCGCCAAGGAATTGCTCGTCAATAAGATGTACGAATGCAAATTGTGTCCGCAGAAGTATCGGCTGAAGTTGGAGTTCCGTTCGCACGTGTATGACGAACACGCCGACATGCAACGCAAGGACACAATGCAAAAACAATGCTGCTACTGTGGCTTGGAGTTGGACGATCCGGCCGAACGTAAACGTCACTACAACAACATGGATTGCATCGTGTCGTTGCGTTGTGTCACATGCGATGCCAAATTCGATAATCATCAGAAATTCCTCGATCACGTGTATGAGAAGCATTTGGCCGGTTTCGGCGAGCAAACGTCCACATCGCCGCGAAATATTAGCGCCATAAGCACAGAGCACTCGCCGGTCAAGAAGTCAACTGTTGGCTTGGGTGGCGCCTCCTCCACCGATGAGTCACGCAGCAGTCACCAAGCTGCCTCATCAAATCAACCGAAATCACAATATTTCTCACGTATGCCACAAGCTTGCCCCATATGCGATCAACagtacaacaattacaacaatgtGTTGCGTCACATGGAATCGAAACATCCCGACCAATTgccacaaacatacaaatgcgtTAAATGCGGCATTGGCTATCCGCGTCTCTCCAATTTGCGCGAACACATGGTTAGCGCTCATTCGGCGGATAAGGCGCGTCATACGGGCTTTGAGTATATTGTGAATGCGGATGCGGTTAAAATTGCCTACGGCACACAACAGAATGTCTACACGGGACGCTATGATTATGTGATGAAGGATTTGATGTCGATAACGAATGGCGGCTCCATCGCGGACGACGATGAGAACTCCAGCGAGAATCCAGCAAAGAAAATGCGCACAGACAACGGTGCCGCTGTGACAACCAGCACTGGATCCGGTGGCAGCGGCGGCAACATGTACAGCAGTCTGAAGGAGTGCCCCATCTGCAATGCCGTCTTCAGCAACAATATCGGACTCTCCAATCATATGCGTTCACATAGTGCGGCGGCACAGAACAATTCACTGACATCGGGTGCGTTAAACGCCAGCAAATCGGCACCGAGTGGTCTAACCATCACAACAGCGCCACCGGCGAAATCCACAACGCCACCGGCTATGCAACACCAGACCGCCGTGCAGAAGGCGATATTCAAGCGTAGCTTGGAACAGGCAGCCGATCGACGTTTCCGGCGCATGCGCTGTCGCCTTTGTCAGCGTCGTTTCTCATCGAAGAAATCGTATCGTTTCCACATGCTCAACGACCATCAAATACGCAATGTACAGTTTATTAAATGCAAACTATGCGATGCGGAATTCGCTTACGAGAAGGGCTTAAAGGTGCATATGTTCAAGATACACAATACACTGCTAAAGGACGAGATGATCGAGAAGCAATTTGAATGTGATATTTGTTCGATCGTGTATCGCAGTGAGCCGCAGCTCATGCACCACAAGAAAACCGTGCACGGCAGCGCTGTCGGCGGCGCCGATCAAGCCGATAATACATTCGACGATAGCTTGgccggcggtggtggtggtgctgATGTCAGTTCGGCTGCGAATCCAGCTGATCGCTCGGGCCTGTCGACGCCGGTAAGTAGTGTGGGCGCCGAACGCAGCACGTTAGACAGCTCAACGAGCGGTCCGCTCTACTGGTACCAGTGCAAGTACTGTCCGTCGAACTTCAATACGAACAAGAAGTTGGCTATACACATAAATTCGCATGACGAATTCGATTCGAATGACTATTCGTGCAAGGATTGCGGCAATGTCTATAGCGGACGCAAGAGTCTATGGGTGCATCGCTATAAGAAGCATCCACAATTCCCCGAACCTTCGGAATGTGTGCTCTGCAAGAAGGTCTTCTTCGATAGTCAGATGTTGGAGAATCACATACCGACCTGTAATCGCAAACCGATCAACGCATCGGGCGCTGTTGCCGAAAGCGCTGGACCGCCACCCATTTACAAGCATAAAACCGGCGATGACGATGACGATGCATCACACGATGCAAGCGGTGTAATTACGACAAGTGCTTTGGGTGGTGGTGAACTGGAGATTACACCGATACCGGCCAGTGGCATGAAGATTAAACTACCCGAAGTGGCTTGTACCATATGTGGACAACGTTTCACCGATCAGGAATTGTTCgccaaacacatacaaatgcatgaaATGGAATTGTATACGGATAATCCGTTGGCAGCCATGTTTGATACTGGCCCAGCGGATCCGAATCAATTCTATTTGGATCGGGTGAATGATAATGGCGAATACGCCTGCGATTTGtgtaataaaacatttacaCAAATGACTGCACTTAAAGTGCATCGTAAATGGCATTTCAGAGGTGATAGCAAACAGAACCAAGCCGACGGGGATCTTTCAGCCAATGCAGCAGCGAACCCCTTATCACAGATCCAGAtcaaccatcaacatccaccGGGATTACAAGCAGTGGGCCTTATGCCCAATCCCCATCATCACTCTTCAAAATCCCAGAAACGCAAACGCGAACTTAAATGCGAATACTGCCCGTCCACCttcatcagcaacaacaatctgCGTCGTCACATCTACGAATTGCATAAAGAGGAAATCGGCAATTTGCCAGTGCCGCCAAAAATCAACATCGATCCATATTTGCAATGTCGTCGCTGTCAAGAGAAATTCGACACGAAGAACGAATGGATCGCACACAAAGTGAACGATGCGCGCGTCACAAAACCATTCGGACCCTTCCAGTGGGGTTGTGATTTGTGCGGTGCCTATGTTTCGCGCAAAGAGAAGCTAATCAATCACATACACAATCACCTGAAGGAGAAAGAGATTGTGCCGGTGGAGGATCAGCAGCAGACACATGATCAGAACCAGAATCGTGCTGTGAAGACAAAGTCAGCGACGACGGCGGGTGTGGTGGCGCCGATTTCGATAAAAGTTGTAGCTGATGGTGAGGTGAAGGTAAAGCAAGAACAGGACAGTGATGAGGAGAAGGAAGACTTACAGGATGGTGTGCTTAAGGGAGAGGCTGAGGAGTCCGATGAAGAGGAGGTCGGCGGTGAGGTGGATGGTGAAGTAGAGGAGGATGAATCGACACGCCAGGAAGTTAGTGCGGCGCGTCGACCTGGCATGGACACAGATGATGAAGTCGATGAGGAGGATGCTTCCGAAGAGGAGGCGGACGAAGATGAGGAATATGAAGTTATGCAGGTGGATATGAATGAGCAGGCCGACGGTGAAGTGGCGGAAGCGGATGAAGATGACGCCGACGATGCCGAAGAGGGTGGGGAAGATGCAGACGATGGCGATGGCGATGACGTTGATATGGATAATGAGGAAGACTCCAATGATCGTACTATTACCGCACCAAATGAACGTAGTTACGCGCGCGTGCCAACGGCCGCAACACAAGTCACCATCGAAACAAATCGCATATCGACAGATACAACCGAAGACTCATCGCCGTCATATGATGAGgacgacgacgacgatgatAACGACAATGATTCGGATGATGACAGTGATGCGGAGAGCGGCGATAGCTCATCACAGGCATCGAAGACACCGGCACCGGCGCCGAAAGCACGCTTCTCCTGCGATCTCTGTCGCGTCTTTTTTGATTCGCAACAAGAGCTGCAAAAACATGTGAAAATGCATTTCCTTAACGGACCCGGCTCGGTGTCGCTAACCGAAATCAAGCCAAAGACGGGCAACAAGTCgagccgcagcagcagcagcgacgTGGTGGCGGTGTAG
- Protein Sequence
- MSDGSPVRARQNCCRLCLAPGSECISILNSYAADKEPLATKIQNCVSIKINPEDHLSLRICHACISYLNSWQSFKNRCLASQNKQRSWLDTTKRQQLLDNNVSISTIGADGTGQHQQQQHQADENEQHTTPSLASSILDGISSLKKRKSLTVYPLPAVEIKDEPMDPDDEYNTKQHDESDDMVDPTLFLERTEEEGDESLMEQIPYHYEQPRPPIELATLVDTKEASCRACNLKFSTRANARRHERNLHPNLFELSTSTPNNMPVTKPTPALAAALELQRATAAAVAAAEASNAASGMITPLKYRQQIVNAFNKCEIGGYDYEHPEKYQHHLTDEKIVFLQQNDEFLRQYQNMTCRCCNKTYTTYKNFMAHMRKKYLALPRNLCFNCLKLNDSKALFISHLKRRNCINLYKVLHALMAKDNNFAAAVTATAAAVPDKLRAKELLVNKMYECKLCPQKYRLKLEFRSHVYDEHADMQRKDTMQKQCCYCGLELDDPAERKRHYNNMDCIVSLRCVTCDAKFDNHQKFLDHVYEKHLAGFGEQTSTSPRNISAISTEHSPVKKSTVGLGGASSTDESRSSHQAASSNQPKSQYFSRMPQACPICDQQYNNYNNVLRHMESKHPDQLPQTYKCVKCGIGYPRLSNLREHMVSAHSADKARHTGFEYIVNADAVKIAYGTQQNVYTGRYDYVMKDLMSITNGGSIADDDENSSENPAKKMRTDNGAAVTTSTGSGGSGGNMYSSLKECPICNAVFSNNIGLSNHMRSHSAAAQNNSLTSGALNASKSAPSGLTITTAPPAKSTTPPAMQHQTAVQKAIFKRSLEQAADRRFRRMRCRLCQRRFSSKKSYRFHMLNDHQIRNVQFIKCKLCDAEFAYEKGLKVHMFKIHNTLLKDEMIEKQFECDICSIVYRSEPQLMHHKKTVHGSAVGGADQADNTFDDSLAGGGGGADVSSAANPADRSGLSTPVSSVGAERSTLDSSTSGPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQFPEPSECVLCKKVFFDSQMLENHIPTCNRKPINASGAVAESAGPPPIYKHKTGDDDDDASHDASGVITTSALGGGELEITPIPASGMKIKLPEVACTICGQRFTDQELFAKHIQMHEMELYTDNPLAAMFDTGPADPNQFYLDRVNDNGEYACDLCNKTFTQMTALKVHRKWHFRGDSKQNQADGDLSANAAANPLSQIQINHQHPPGLQAVGLMPNPHHHSSKSQKRKRELKCEYCPSTFISNNNLRRHIYELHKEEIGNLPVPPKINIDPYLQCRRCQEKFDTKNEWIAHKVNDARVTKPFGPFQWGCDLCGAYVSRKEKLINHIHNHLKEKEIVPVEDQQQTHDQNQNRAVKTKSATTAGVVAPISIKVVADGEVKVKQEQDSDEEKEDLQDGVLKGEAEESDEEEVGGEVDGEVEEDESTRQEVSAARRPGMDTDDEVDEEDASEEEADEDEEYEVMQVDMNEQADGEVAEADEDDADDAEEGGEDADDGDGDDVDMDNEEDSNDRTITAPNERSYARVPTAATQVTIETNRISTDTTEDSSPSYDEDDDDDDNDNDSDDDSDAESGDSSSQASKTPAPAPKARFSCDLCRVFFDSQQELQKHVKMHFLNGPGSVSLTEIKPKTGNKSSRSSSSDVVAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01563945;
- 90% Identity
- iTF_00191500;
- 80% Identity
- -