Basic Information

Gene Symbol
ttk
Assembly
GCA_031772095.1
Location
CM062653.1:52804721-52813404[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.9e-18 3.8e-15 56.0 0.0 2 45 594 638 593 638 0.97

Sequence Information

Coding Sequence
ATGTCGGTGCAACAATTTTGTTTGCGCTGGAATAACCATCAACCGAATTTCATTTCGGTATGTTCTTCGTTACTCCATAATGGCACATTAGTGGACGTCACCTTAGCAGCAGAAGGTCGACAACTACAAGCCCACAAAATTGTACTCTCTGCTTGCAGCTCATATTTTCAAACACTATTTACATCGAATCCCTGTCAACACCCAATTGTAATACTTAAAGATGTCCAATATGATGACCTTAAGACTATGGTTGATTTTATGTACTATGGAGAAGTGAATGTATCACAAGAGCAGTTACCACACATTCTAAAAACGGCTGAGATGCTTAAAATCAAAGGACTTGCTGAAATGCCCACCGATCCTGCCAATTTAACTAAATCTGAAAGTAAATCATCGAATGAACCCACCGATTTAGTGGGTAGCGGTAGTACTGGCAGCAATGGCCAAAGTAGCAGTGGTGTTAATAGCGGCGGCATGGGTAGTAGTGCTGGTGGTAGCATAAATGAGACGCTCTGGGAGCCGCAGCATCACCATGGTCAGCACAGTGAAACCCAGTTTCAAACTCATccccatcaacaacaacaaaatagccaAACGCAAACatcacaacagcagcaacagcaacatcatcAATTAAGACGTACTCCCTCACCATTAGGTGCGGGAGCTTCACCGGCAACTAGACGAAAACGACTTCGGAAATCTTCAAATAATGGATCTGGCGATCGCACCAATTCGGACGAGCAACATACTTCTTTGGACAGTGGAAATAATACTGGCGGCATAAGTCTTACACAGATGGGACAAATGTCTTTTGGCACCACAGGTGGTACCATCAGTGGCATGCCAACTCACACACTACACGCTACAAAATTGTTGAAAGAATCATCTAGCACTGAGGTTGAACCACATCCACAGGATGATAGCTTGGACGATGGTCATGGACATGTACACAtgcaaattAAACCTGAAGTTGACATGAGCAGCGTACAGCAATCGATGCCATTGGACATATCTGCTGCTACAACTCCTTCAGAGCATGATGCACCAAATTCTCAATCATCTCATTCTGGTCTGCAATGGACGGTCGTTGACTCGAACTATTCACGCTTTTCGCTATCGACTTGTCAGCCAAATTTGATTGGCAACGGCGGCGGGAACGCTGGTGGCAGCTCTGGCGCACAACAAGCGAACGCATCAAATAGTGATCCACAGCAACATCAACGACAGCAACACGCGCAGGAGTCAGCCCAACAAGCGGCTGCtggacaacagcagcagcagcaacagcaacaacagcattttCAACAGTTACactatcaacagcaacaacagcagcagcagcaacaacaacagcagcagcaacaacagcaacagcagcaacaacaacagcaacagcaacaaaatgccGCAACCACATATTCGCCACAGATCATCACTGTGAATAGCCTAGTCAGCAATTATGGCGGTGCCGGTGCGGCAGCACAAAACCTATCACCAACTTCACCCAATGAATCGAGCATGGTACAATCGGTGTACAGTCAAGGTCCTACGCCCATACAATCACCCGTACATCCCAACGATGTTACAGGAAATGCATCAGGCAGTGGTGGTAGTAACGTTTCCGCCGCCAATGCCGCAGCAAGTGGTGGtagtagtggtggtggtggtaatgCGGCCGGTGctagcggcagcagcagctcaAGTGGAGGAAATACAAATAGCGGCAGCGGTGGCAATCAAGGTGCAAAACGTAAACGTTCGGTCAATCCGCAAGGCGATGAGAATTTCATACGCGCTTTGGAGGCAGTACGTTCCGGTGGTATAGGTTTCTGTAAGGCTGCACGTCTTTTCGGCGTAAATAATCGTACATTGTGGTTAGAGTACAAGAAACGCGGTTACCCTGTATCGAGGCCGAGCATCAAAGCACGTGTCGTTAAGCAAGAACCAAATATGTCACCATCACCAACACCACCGAACACCGCTACCGATGATACGACCAATGAAAATTACGAACACCTAACCGCCGCTGTAGCTGCGGCTGCTCAATCAGCTGCATTGAATATGCAAATACCGCCTCCAGCTGATACGCCTACACCGTCGGTGATGTGTACACCACATCATACTGGCTCAGCTAGCGGTGCTGGCGGCGCACACCCGGCTATGGGTGTAATGAACTTTTTAGATCCGCGACATATGGACTTCTCGGCGGCTGGTCTGCATACCGTGTCCAGACAGCGATATATTGATGCGACCGGTGTCGGTGCTGGCACCGGTACGGGCACTATCAACAATTCAGTTTCGGGTGCAAACACTGCGACGACGATTTCGATGCACATTGCACAACAgcatcaacagcaacaccaacaaacgGTAGCAGTAGCAGCCACCACACATACACATCCAATAACAACAGCCATAATACAAACAGCAACACATCCCACACATCATAGCATTGCTAGTGTGACTGGTGCGGCTGGTGTAGTGGGTGGcggtagtggtggtggtggtggcaatcATACGGTATTGGCACACTCACATCCATTGGCGCTCGCTCATAGCGATATATCACAGCCGTCAAATGCTAACGTCTCCACAATTGTCGCACAGCCAGAATGTTCACCACGCGCTGTTAATATGGCAATGTCACCGTCACCGACCAGCCTGCtctctcaacaacaacaacagcattcgCCAGTACAATTGCAACATCAACATtcgcaacaacagcagcaaatggGTACGAAACGCAATCGTGTACTAACACGACAGCCGCGTGTAAAACGCGATAGTGATAGTCTATCAAATGCACAGGTTTCACCGGAACCCCACCAAGGAAGTGGTGTCGATTTCGATCCCTTTAGCAATTCGCCCGGTGGTAGTTCACATTCAAACTACATCCCGGCACATGCGCTACAATTGCATCCCAGTCATCATCACCTACTGACAGTGCCGACGCGTATTGAGCGTCATTCATCCGAACCGGCGCCCAGTTTGACACCATCGTCACCCCATTTGCTCTCTGTACCGCAGAGTACACCATTTCTGATGAAACAACATTCGGATCCATTATTGCCCACGCAACATTCAATTAGTGGCGCTGGCGCATTAATCGTTGGTGGTGGCACAAATCCGTTTGCACCGCTACATCGTCAGTATTCACATCCACTATCTTGTACAACCAGTAGCGCTAACAGCAGTGCCGGTACTAGTCATATCACCAGCGTTCCATTACATCATTCACACCACATATCACTACCCGAATCAATGTACACGTCCGGCGGTTCACCACCACCAGTTGGCTCGTCGCAATACGTGGTGCCACAACAAATTGTGTCGAGCGGTAGTAGTGGCACATCGAATGAGATAGTCGGCGCGGCGAGTGCTTCATCGACTAGTCCGTCAAAAGTGCTCAGCATACCACATTTCACCACTACTTATATTGATGACAGCGATGCACGTGGTCGTAACAATTCACCAAGTACCCATTCATCTATGGGCGGCGTACATACTAATACGTCGACTATTAGTTCGGCACCCTTGGAGCGTGTTCGTTCAGCGGAATCGAATACAccaccgccaacaacaacaagcaagatTCGTAGTTCGAAATCAACATCTAGTGTTATGCTATCGGAACGTATGAGTAGTTTACATCCTGGTGCTGCAGCTATGGGCAGCAGTTCATTTGAACACTTGCCTTCGTTGCGGGTTAAGAGCGAGGAATTGCAAAGATCAGTGTCTTCTCCACAAACCTCTCGGGAGATCATCACATTGGAGAATCCTCGCTCCAGTCATTGTCCTGTTATACGGCCCGGGCCGGCCCTGGGCTGTAATTTTTGTTGGAACACTATAGATGGACATGGTAGAATTTTGCGGCGCAAAACCAAATACCACTGTCCCGAATGTCAAACGAATTTATGCATTGTACCATGTTTTCAGGAGTATCATGAGCGGCAAAACAATGAAGCGGCCAATACTTCAACCGGCAATGATGGCAATAGTAGTAAATCTTACTCAGGTACCACCGGCAGGAGTGGCAATAGTGGCAGTGGCGGTAATAGCACACGGCTATATTCCAAAACTGAATCCATTTGA
Protein Sequence
MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQTLFTSNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPANLTKSESKSSNEPTDLVGSGSTGSNGQSSSGVNSGGMGSSAGGSINETLWEPQHHHGQHSETQFQTHPHQQQQNSQTQTSQQQQQQHHQLRRTPSPLGAGASPATRRKRLRKSSNNGSGDRTNSDEQHTSLDSGNNTGGISLTQMGQMSFGTTGGTISGMPTHTLHATKLLKESSSTEVEPHPQDDSLDDGHGHVHMQIKPEVDMSSVQQSMPLDISAATTPSEHDAPNSQSSHSGLQWTVVDSNYSRFSLSTCQPNLIGNGGGNAGGSSGAQQANASNSDPQQHQRQQHAQESAQQAAAGQQQQQQQQQQHFQQLHYQQQQQQQQQQQQQQQQQQQQQQQQQQQQNAATTYSPQIITVNSLVSNYGGAGAAAQNLSPTSPNESSMVQSVYSQGPTPIQSPVHPNDVTGNASGSGGSNVSAANAAASGGSSGGGGNAAGASGSSSSSGGNTNSGSGGNQGAKRKRSVNPQGDENFIRALEAVRSGGIGFCKAARLFGVNNRTLWLEYKKRGYPVSRPSIKARVVKQEPNMSPSPTPPNTATDDTTNENYEHLTAAVAAAAQSAALNMQIPPPADTPTPSVMCTPHHTGSASGAGGAHPAMGVMNFLDPRHMDFSAAGLHTVSRQRYIDATGVGAGTGTGTINNSVSGANTATTISMHIAQQHQQQHQQTVAVAATTHTHPITTAIIQTATHPTHHSIASVTGAAGVVGGGSGGGGGNHTVLAHSHPLALAHSDISQPSNANVSTIVAQPECSPRAVNMAMSPSPTSLLSQQQQQHSPVQLQHQHSQQQQQMGTKRNRVLTRQPRVKRDSDSLSNAQVSPEPHQGSGVDFDPFSNSPGGSSHSNYIPAHALQLHPSHHHLLTVPTRIERHSSEPAPSLTPSSPHLLSVPQSTPFLMKQHSDPLLPTQHSISGAGALIVGGGTNPFAPLHRQYSHPLSCTTSSANSSAGTSHITSVPLHHSHHISLPESMYTSGGSPPPVGSSQYVVPQQIVSSGSSGTSNEIVGAASASSTSPSKVLSIPHFTTTYIDDSDARGRNNSPSTHSSMGGVHTNTSTISSAPLERVRSAESNTPPPTTTSKIRSSKSTSSVMLSERMSSLHPGAAAMGSSSFEHLPSLRVKSEELQRSVSSPQTSREIITLENPRSSHCPVIRPGPALGCNFCWNTIDGHGRILRRKTKYHCPECQTNLCIVPCFQEYHERQNNEAANTSTGNDGNSSKSYSGTTGRSGNSGSGGNSTRLYSKTESI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01563861;
80% Identity
iTF_01563861;