Zcuc014129.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Zeugodacus cucurbitae
Gene Symbol
ttk
Assembly
GCA_028554725.2
Location
CM053021.1:53118112-53126737[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.9e-18 5.1e-15 56.0 0.0 2 45 589 633 588 633 0.97

Sequence Information

Coding Sequence
ATGTCGGTGCAACAGTTTTGTTTGCGCTGGAATAACCATCAACCGAATTTCATTTCGGTATGTTCTTCGTTACTCCATAATGGCACTTTAGTGGACGTCACCTTAGCAGCAGAAGGTCGACAACTACAAGCCCACAAAATTGTACTCTCTGCTTGCAGCTCATATTTTCAAACACTATTTACATCGAATCCCTGTCAACACCCAATTGTAATACTTAAAGATGTCCAATATGATGACCTTAAGACTATGGTTGATTTTATGTACTATGGAGAAGTGAATGTATCACAAGAGCAGTTACCACACATTCTAAAAACGGCTGAGATGCTTAAAATCAAAGGACTTGCTGAAATGCCCACCGATCCTGCCAATTTAACTAAATCTGAAAGTAAATCATCGAATGAACCCACCGATTTAGTGGGTAGCGGTAGTACTGGCAGCAATGGCCAAAGTAGCAGTGGTGTTAATAGCGGCGGCATGGGTAGTAGTGCTGGTGGTAGCATAAATGAGACGCTCTGGGAGCCGCAGCATCACCATGGTCAGCACAGTGAAACCCAGTTTCAAACCCATccccatcaacaacaacaaaatagccaAACGCAAACatcacaacagcagcaacagcaacatcatcAATTAAGACGTACTCCCTCACCATTAGGTGCGGGAGCTTCACCGGCAACTAGACGAAAACGACTTCGGAAATCTTCAAATAATGGATCTGGCGATCGCACCAATTCGGACGAGCAACATACTTCTTTGGACAGTGGAAATAATACTGGCGGCATAAGTCTTACACAGATGGGACAGATGTCTTTTGGCACCACAGGTGGTACCATCAGTGGCATGCCAACTCACACACTACACGCTACAAAATTGTTGAAAGAATCATCTAGCACTGAGGTTGAACCACATCCACAGGATGATAGCTTGGACGGTGGTCATGGACATGTACACatgcaaattaaACCTGAAGTCGACATGAGCAGCGTACAACAATCGATGCCATTGGACATATCTGCTGCTACAACTCCTTCAGAGCATGATGCACCAAATTCTCAATCATCTCATTCTGGTCTGCAATGGACGGTCGTTGACTCGAACTATTCACGCTTTTCGCTATCGACTTGTCAGCCAAATTTGATTGGCAACGGCGGCGGGAACGCTGGTGGCAGCTCTGGCGCACAACAAGCGAACGCATCAAATAGTGATCCACAGCAACATCAACGACAGCAACACGCGCAGGAGTCAGCCCAACAAGCGGCTGCtggacaacagcagcagcagcaacagcaacaacagcattttCAACAGTTACactatcaacagcaacaacagcagcagcagcaacaacaacagcagcagcaacaacagcaacagcaacagcaacaaaatgccGCAACCACATATTCGCCACAGATCATCACTGTGAATAGCCTAGTCAGCAATTATGGCGGAGCCGGTGCGGCAGCACAAAACCTATCACCAACTTCACCCAATGAATCCAGCATGGTACAATCGGTGTACAGTCAAGGTCCTACGCCCATACAATCACCCGTACATCCCAACGATGTTACAGGAAATGCATCAGGCAGTGGCGGTAGTAACGTTTCCGCCGCCAATGCCGCTGCAAGTGGAGGtagtagtggtggtggtggtaatgCGGCCGGTgctggcggcagcagcagctcaAGTGGAGGAAATACAAATAGCGGCAGCGGTGGCAATCAAGGTGCAAAACGTAAACGTTCTGTCAATCCGCAAGGCGATGAGAACTTCATACGCGCTTTGGAGGCAGTACGTTCCGGTGGTATTGGTTTCTGTAAGGCTGCACGTCTTTTCGGCGTAAATAATCGTACATTGTGGTTAGAGTACAAGAAACGCGGTTACCCCGTATCGAGGCCCAGCATCAAAGCACGTGTCGTTAAGCAAGAACCAAATATGTCACCATCACCAACACCACCGAACACCGCTACCGATGATACGACCAATGAAAATTACGAACACCTAACCGCCGCTGTAGCTGCGGCTGCTCAATCAGCTGCATTGAATATGCAAATACCGCCTCCAGCTGATACGCCTACACCGTCGGTGATGTGTACACCACATCATACTGGCTCAGCTAGCGGTGCTGGCGGCGCACACCCGGCTATGGGTGTAATGAACTTTTTAGATCCGCGACATATGGACTTCTCGGCGGCTGGTCTGCATACCGTGTCCAGACAGCGATATATTGATGCGACCGGTGTCGGTGCTGGCACCGGTACGGGCACTATCAACAATTCAGTTTCGGGTGCAAACACTGCGACGACGATTTCGATGCACATTGCACAacagcatcaacagcaacaccaacaaacgGTAGCAGTAGCAGCCACCACACATACACATCCAATAACAACAGCCATAATACAAACAGCAACACATCCCACACATCATAGCATTGCTAGTGTGACTGGTGCGGCTGGTGTAGTGGGTGGcggtagtggtggtggtggcaatcATACGGTATTGGCACACTCACATCCATTGGCGCTCGCTCATAGCGATATATCACAGCCGTCAAATGCTAACGTCTCCACAATTGTCGCACAGCCAGAATGTTCACCACGCGCTGTTAATATGGCAATGTCACCGTCACCGACCAGCCTGCtctctcaacaacaacaacagcattcgCCAGTACAATTGCAACATCAAcattcgcaacaacaacagcaaatgggTACGAAACGGAATCGTGTACTAACACGACAACCGCGTGTTAAACGCGATAGTGATAGTCTATCAAATGCACAGGTTTCACCGGAACCCCACCAAGGAAGTGGTGTCGATTTCGATCCCTTTAGCAATTCGCCCGGTGGTAGTTCACATTCAAACTACATCCCGGCACATGCGCTACAATTGCATCCCAGTCATCATCACCTACTGACAGTGCCGACGCGTATTGAACGTCATTCATCCGAACCGGCGCCCAGTTTGACACCATCGTCACCCCATTTGCTCTCTGTACCGCAGAGTACACCATTTCTGATGAAACAACATTCGGATCCATTACTGCCCACGCAACATTCACTTAGTGGCGCTGGCGCATTAATCGTTGGTGGTGGCACAAATCCGTTTGCACCGCTACATCGTCAGTATTCACATCCACTATCTTGTACAACCAGTGGCGCTAACAGCAGTGCCGGTACTAGTCATATCACCAGCGTTCCATTACATCATTCACACCACATATCACTACCCGAATCGATGTACACGTCCGGCGGTTCGCCACCACCAGTTGGCTCGTCGCAATACGTGGTGCCACAACAAATTGTGTCTAGCGGTAGTAGTGGCACGTCGAATGAGATAGTCGGCGCGGGGAGTGCTTCATCGGCTAGTCCGTCAAAAGTGCTCAGCATACCACATTTCACCACTACTTATATTGATGACGGCGATGCACGTGGCCGTAACAATTCACCAAGTACCCATTCATCTATGGGCGGCGTACATACTAATACGTCGACTATTAGTTCGGCACCCTTGGAGCGTGTTCGTTCAGCGGAATCGAATACAccaccgccaacaacaacaagcaagatTCGTAGTTCGAAATCAACATCTAGTGTTATGCTATCGGAACGTATGAGTAGTTTACATCCTGGCGCTGCAGCTATGGGCAGCAGTTCATTTGAACACTTGCCTTCGTTGCGCGTAAAGAGCGAGGAATTGCAAAGATCAGTGTCTTCTCCACAAACCTCTCAGGAGATCATCACATTGGAGAATCCTCGCTCCAGTCATTGTCCTGTTATACGGCCCGGGCCGGCACTGGGCTGTAATTTTTGTTGGAACACTATAGATGGACATGGTAGAATTTTGCGGCGCAAAACCAAATACCACTGTCCCGAATGTCAAACGAATTTATGCATTGTACCATGTTTTCAGGAGTATCATGAGCGGCAAAACAATGAAGCGGCCAATACTTCAACCGGCAATGATGGCAATAGTAGTAAATCTTACTCAGGTACCACCGGCAGGAGTGGCAATAGTGGCAGTGGCGGTAATAGCACACGGCTATATTCCAAAACTGAATCCATTTGA
Protein Sequence
MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQTLFTSNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPANLTKSESKSSNEPTDLVGSGSTGSNGQSSSGVNSGGMGSSAGGSINETLWEPQHHHGQHSETQFQTHPHQQQQNSQTQTSQQQQQQHHQLRRTPSPLGAGASPATRRKRLRKSSNNGSGDRTNSDEQHTSLDSGNNTGGISLTQMGQMSFGTTGGTISGMPTHTLHATKLLKESSSTEVEPHPQDDSLDGGHGHVHMQIKPEVDMSSVQQSMPLDISAATTPSEHDAPNSQSSHSGLQWTVVDSNYSRFSLSTCQPNLIGNGGGNAGGSSGAQQANASNSDPQQHQRQQHAQESAQQAAAGQQQQQQQQQQHFQQLHYQQQQQQQQQQQQQQQQQQQQQQQNAATTYSPQIITVNSLVSNYGGAGAAAQNLSPTSPNESSMVQSVYSQGPTPIQSPVHPNDVTGNASGSGGSNVSAANAAASGGSSGGGGNAAGAGGSSSSSGGNTNSGSGGNQGAKRKRSVNPQGDENFIRALEAVRSGGIGFCKAARLFGVNNRTLWLEYKKRGYPVSRPSIKARVVKQEPNMSPSPTPPNTATDDTTNENYEHLTAAVAAAAQSAALNMQIPPPADTPTPSVMCTPHHTGSASGAGGAHPAMGVMNFLDPRHMDFSAAGLHTVSRQRYIDATGVGAGTGTGTINNSVSGANTATTISMHIAQQHQQQHQQTVAVAATTHTHPITTAIIQTATHPTHHSIASVTGAAGVVGGGSGGGGNHTVLAHSHPLALAHSDISQPSNANVSTIVAQPECSPRAVNMAMSPSPTSLLSQQQQQHSPVQLQHQHSQQQQQMGTKRNRVLTRQPRVKRDSDSLSNAQVSPEPHQGSGVDFDPFSNSPGGSSHSNYIPAHALQLHPSHHHLLTVPTRIERHSSEPAPSLTPSSPHLLSVPQSTPFLMKQHSDPLLPTQHSLSGAGALIVGGGTNPFAPLHRQYSHPLSCTTSGANSSAGTSHITSVPLHHSHHISLPESMYTSGGSPPPVGSSQYVVPQQIVSSGSSGTSNEIVGAGSASSASPSKVLSIPHFTTTYIDDGDARGRNNSPSTHSSMGGVHTNTSTISSAPLERVRSAESNTPPPTTTSKIRSSKSTSSVMLSERMSSLHPGAAAMGSSSFEHLPSLRVKSEELQRSVSSPQTSQEIITLENPRSSHCPVIRPGPALGCNFCWNTIDGHGRILRRKTKYHCPECQTNLCIVPCFQEYHERQNNEAANTSTGNDGNSSKSYSGTTGRSGNSGSGGNSTRLYSKTESI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01563861;
90% Identity
iTF_01563679;
80% Identity
iTF_01562988;