Zcuc003404.1
Basic Information
- Insect
- Zeugodacus cucurbitae
- Gene Symbol
- grn
- Assembly
- GCA_028554725.2
- Location
- CM053019.1:52443960-52494430[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-19 1.3e-15 57.8 4.7 1 35 436 469 436 470 0.98 2 2 1e-18 4.4e-15 56.0 6.3 1 35 496 529 496 530 0.97
Sequence Information
- Coding Sequence
- ATGGGAATTATCAAGCGCAACGATCGACAAGATGCAGCAGCGGCAGTCCGAACAGCGCTCACTACAGCAGCTAACAACAACGTcagcacagcagcagcaaccacTGTGTTGACTGTCGCTCCAGCAGCAACATATAATGCCACATCCCGTATGCCATCGTCCCATACATCACCGCAAGTGTGTCGGCCGCACTTTCATCCGCCCCTCGGTTCGTGGCTTACCAGCGAGCATAAATCATTCGCACCCGCCAGCCCATGGGGCAGTCCGTTTGCATGCCCCCAGGATCCGCAAGTGGACCATAAGGTCGGCCAAATTGGCCAAAGCCATCAGACGACGGCGGGCCAACATTCATTTCCATTCCCACCGACACCGCCAAAGGATTCCACACCCGATTCAGTACAAACCGGTCCATCAGAGTATCAGGCCGTTGTGAACGCGTTCATGCATCAGGCGCAATCGACCGGCACTACCTCAATAGCGGACACGAGTTGTGCGCTGGACATCAAACCCGCCATACAAAATGGACTCGGCAGTCTGACGCATAACGGCAGTCAGCAATCGTCGGCGGCGCCAAAGCAGCGTGAAgcgAACAACGGTAgttcgcacaacaacaacagcggcagcaataacaacagtagcgcgaacaataataacaacaacaataatagcggCTCcgccaccaacaacagcagtcaCAATGTACACGCACACACCTCCAGCGCCAATACCATCTCCGCCCTGAACGGCTCGAGCCTCTTCGATGGCACCGCGCAAGCGCACTACGCCAACACGAATACGTCACTTGGCAGCGCTGGCAGCAGCGCGAGCGCAATGGGCGGTTATGATGGCACATATGCCTCGTATGCGGCACATCATCATTTGGCCAACACCTCAGCGGCGGTGGCACATCATCAGGCGGCCGCTGCAGCAGCGGCGGGTATGTTTCAAAGTTCCTCAatggcagcggcggcggcggcgcgcCACAGCATGTCGGGCGGTCATCATACGCATCATCATATGATGGGTGGTGGCGCGTCGACGGGTGTGTCGTCTGGGCTGGGGCAGAGTCATGGTGGTATTGGTGGTGGTAATGGTATTagtggcggtggcggcggcagcagcggcGGTGGTAGCCTTGGCTTGGGTGGCCTGAACGGTGGCAGTTTGGGTGGCAATATGTCGGCTAGTCATGGGCATGGACATGGTCACGGGCATAGCCATCATACGCACAGTCATGCGCACAGCCATAGTCAGGATGTGAAGCCGGCGCGTACGAAACCGAGAACCAGTGCGGaGGGTCGTGAATGCGTCAACTGCGGTGCCACATCAACGCCATTATGGCGACGCGACGGCACTGGCCATTATTTGTGCAATGCCTGTGGTCTCTACTATAAAATGAATGGACAAAATCGACCACTAATTAAACCAAAGCGAAGACTGACACTACAGTCATTACAAAGCGCCGCGAAGCGAGCGGGGACCTCATGTGCGAATTGCAAAACCACAACGACAACACTTTGGCGGCGGAACGCCAGCGGCGAGCCAGTGTGTAATGCCTGCGGACTCTACTACAAGTTGCATAATGTAAATCGCCCGCTTACCATGAAAAAAGAAGGCATCCAAACGCGTAATCGCAAGCTATCCTCGAAATCGAAAAAGAAGAAGGGTTTGGGTGGTCCATGTCTACCTATTGGCAGTCATTTGGGTATGGGTGATTTCAAGCCACTCGATCCATCGAAAGGTTTCGGCGGCGGCTTTCCAGCTTCGATGGCACAACATGGCCATCTTTCCAGTGGTTTACATCCCGCACATGCGCATATGCACGGCGGCTGGTATACCGGCGGTATGGGCGCTTTGGGTGCTTCTGGTGGCTTGCAGAGCGGTTTCTCGACGGCCGGTTCGCTGGGTGGCGGTGTGGTGCCACATTCGCAGCCATATCATCTTGGCTTGGGTTCGATGGGCACCTGGCGTACAGATTATACGTGA
- Protein Sequence
- MGIIKRNDRQDAAAAVRTALTTAANNNVSTAAATTVLTVAPAATYNATSRMPSSHTSPQVCRPHFHPPLGSWLTSEHKSFAPASPWGSPFACPQDPQVDHKVGQIGQSHQTTAGQHSFPFPPTPPKDSTPDSVQTGPSEYQAVVNAFMHQAQSTGTTSIADTSCALDIKPAIQNGLGSLTHNGSQQSSAAPKQREANNGSSHNNNSGSNNNSSANNNNNNNNSGSATNNSSHNVHAHTSSANTISALNGSSLFDGTAQAHYANTNTSLGSAGSSASAMGGYDGTYASYAAHHHLANTSAAVAHHQAAAAAAAGMFQSSSMAAAAAARHSMSGGHHTHHHMMGGGASTGVSSGLGQSHGGIGGGNGISGGGGGSSGGGSLGLGGLNGGSLGGNMSASHGHGHGHGHSHHTHSHAHSHSQDVKPARTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGPCLPIGSHLGMGDFKPLDPSKGFGGGFPASMAQHGHLSSGLHPAHAHMHGGWYTGGMGALGASGGLQSGFSTAGSLGGGVVPHSQPYHLGLGSMGTWRTDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00304195;
- 90% Identity
- iTF_00193969;
- 80% Identity
- -