Ccap007288.1
Basic Information
- Insect
- Ceratitis capitata
- Gene Symbol
- grn
- Assembly
- GCA_000347755.4
- Location
- NW:2247364-2389049[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-19 4.7e-16 57.5 4.7 1 35 539 572 539 573 0.98 2 2 8.1e-19 1.7e-15 55.8 6.3 1 35 599 632 599 633 0.97
Sequence Information
- Coding Sequence
- ATGGATATGACTTCAACAGCGGAAGCTGCCGCCCGCAGCTGGTATGATAATCCGCGTTTAGGCAGCTCTCCGCAAACTAACGGCCTCGGTGGCGCCGGTGCCGGTTTGGGACATCACGCCCTCAGTGCAGCTGGCAGCGCTGGGATGGGCGGTGGCGCTGGCCTCGGCGGCattggtggcggtggtggcggcggcgctGGTGGCGGTGTTGGTTTGGGCGGCTTGGACAGCAACGATATGAGCGCATTCTATGCGCTCGAGAGTAATGGCCATCACAGACGCTACTATCCCAGTTATCATCAGCACACATCCCGTATGCCATCGTCCCATACATCACCGCAAGTGTGTCGGCCGCACTTTCATCCGCCCCTCGGTTCATGGCTTACCAGCGAACATAAATCATTTGCACCCGCCAGCCCATGGGGCAGTCCGTTTGCATGCCCCCAAGATCCGCAAGTGGACCATAAGGTCAGCCAAATTGGTCAGAGTCATCAGACGACGGCCGGTCAGCATTCATTTCCATTCCCACCGACACCGCCAAAGGATTCCACACCCGATTCAGTACAAACCGGTCCATCGGAGTATCAGGCCGTTGTGAACGCATTCATGCATCAAGCGCAATCGACCGGCTCTACCTCAATAGCGGACACGAGTTGTGCGCTGGACATAAAACCCGCCATACAGAACGGTCTCGGCAGTCTGTCGCACAACGGCGGCAATCAACAGTCGTCCGCGGCGCCAAAACAGCGTGAAGgtaccaataataataacaacaacaacaataataatacaaataacagtaacaataacGCGACGAACAGCAGTAATTcgcataacagcaacaacaacaacagcagcaatagtaGCAACACAgcgaacaataacaacaactcctCCACATCGAACAGTAACAACCACAACGTACACGCACACACCTCCAGCGCCAATACCATCTCCGCCCTTAACGGCAGCAGCCTATTCGATGGCACAGCGCAAGCGCATTACGCCAATAGTCTCGGCAATAGCAGTAGCAGTCCACACGGCCTCGGCGGCAATGGACTCACAGCGAATAGCTCACTGAACGGTGCCGGTAGTAGCGCCAGTGCGATGGGTGGCTATGACGGTACATACGCTTCATATGCGGCCCATCATCATTTGGCGAACACCTCGGCGGCGGTGGCACATCATCAGGCTgcggcagcagcggcagcgggtATGTTTCAAAGTTCCTCAATGGCAGCGGCGGCTGCGGCGCGACACAGCATGTCGGGTGGCCATCATACGCATCATCATATGATGGGTGGTGCGTCGGCGGGCATGTCCACCGGTCTGGGGCAGAGTcatggtggtagtggtggtatTGGCGGCGTTGGTATTGGCGTTGGTAGTGGCGGTGGCaatggtggtggcggcggcagtAGCGGCAGTTTGGGCTTGGGTGGCCTAGGCGGCGGCAGTTTGAGTGGCAATATGTCGAGTGGCCATCATGGTGGCCATCACAGCGGTCATGGTGGACATGGCAGTCATGGTCATGTACATAGCCATGCGCATAGCCATAGTCAGGATGTGAAGCCGGCGCGTACGAAACCGAGGACCAGTGCTGaGGGTCGCGAGTGCGTTAACTGCGGTGCCACATCAACGCCATTATGGCGACGCGATGGCACCGGTCATTATCTGTGCAATGCCTGTGGTCTGTATTACAAAATGAATGGACAAAATCGGCCACTTATAAAACCAAAGCGAAGACtgACACTACAGTCACTACAGAGTGCTGCGAAACGTGCGGGGACATCCTGTGCGAATTGCAAAACCACAACGACAACCCTTTGGCGGCGGAACGCAAGCGGTGAACCAGTGTGTAATGCCTGTGGGCTATACTACAAGTTGCATAATGTCAATCGCCCGCTTACCATGAAAAAAGAAGGCATTCAAACGAGAAATCGCAAATTATCCTCCAAATCGAAAAAGAAGAAAGGTCTTGGTGGCGGTTGTCTACCCATTGGTAGTCATTTGGGCATGGGCGATTTTAAGCCGCTTGACCCGTCGAAGGGTTTCGGTGGCGGTTTTCCAGCATCAATGGCACAACATGGCCATCTTTCCAGTGGTTTACATCCCGCACATGCGCATATGCACGGCGGTTGGTATACCGGCGGTATGGGCGCTTTGGGTGCATCTAGTGGCCTGCAAAGCGGCTTCTCTACGGCAGGTTCACTGGGTGGCGGTGTGGTGCCACATTCGCAGCCATATCATCTTGGTTTGGGTTCGATGGGCACCTGGCGTACAGATTATACGTGA
- Protein Sequence
- MDMTSTAEAAARSWYDNPRLGSSPQTNGLGGAGAGLGHHALSAAGSAGMGGGAGLGGIGGGGGGGAGGGVGLGGLDSNDMSAFYALESNGHHRRYYPSYHQHTSRMPSSHTSPQVCRPHFHPPLGSWLTSEHKSFAPASPWGSPFACPQDPQVDHKVSQIGQSHQTTAGQHSFPFPPTPPKDSTPDSVQTGPSEYQAVVNAFMHQAQSTGSTSIADTSCALDIKPAIQNGLGSLSHNGGNQQSSAAPKQREGTNNNNNNNNNNTNNSNNNATNSSNSHNSNNNNSSNSSNTANNNNNSSTSNSNNHNVHAHTSSANTISALNGSSLFDGTAQAHYANSLGNSSSSPHGLGGNGLTANSSLNGAGSSASAMGGYDGTYASYAAHHHLANTSAAVAHHQAAAAAAAGMFQSSSMAAAAAARHSMSGGHHTHHHMMGGASAGMSTGLGQSHGGSGGIGGVGIGVGSGGGNGGGGGSSGSLGLGGLGGGSLSGNMSSGHHGGHHSGHGGHGSHGHVHSHAHSHSQDVKPARTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPIGSHLGMGDFKPLDPSKGFGGGFPASMAQHGHLSSGLHPAHAHMHGGWYTGGMGALGASSGLQSGFSTAGSLGGGVVPHSQPYHLGLGSMGTWRTDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01563344; iTF_00193969;
- 90% Identity
- -
- 80% Identity
- -