Basic Information

Insect: Zeugodacus cucurbitae
Gene Symbol: -
Assembly: GCA_028554725.2
Location: CM053020.1:28537417-28547243[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 4.8e-05 0.0063 17.9 1.7 1 23 555 577 555 577 0.97

2 18 1.5e-05 0.0019 19.6 0.4 1 23 583 605 583 605 0.97

3 18 0.0012 0.16 13.5 0.5 1 23 611 633 611 633 0.95

4 18 2.4e-05 0.0032 18.9 3.1 1 23 639 661 639 661 0.97

5 18 5.5e-05 0.0072 17.8 4.7 1 23 667 689 667 689 0.99

6 18 0.0001 0.013 16.9 5.7 1 23 695 717 695 717 0.97

7 18 4.9e-07 6.5e-05 24.2 4.3 1 23 723 745 723 745 0.98

8 18 1.8e-07 2.3e-05 25.6 2.4 1 23 751 773 751 773 0.97

9 18 0.0001 0.014 16.9 6.7 1 23 779 801 779 801 0.97

10 18 3e-05 0.0039 18.6 6.5 1 23 807 829 807 829 0.98

11 18 5e-06 0.00066 21.0 4.5 1 23 835 857 835 857 0.98

12 18 1.9e-05 0.0024 19.2 7.1 1 23 863 885 863 885 0.98

13 18 9.4e-06 0.0012 20.2 7.6 1 23 891 913 891 913 0.97

14 18 1.1e-06 0.00014 23.2 7.7 1 23 919 941 919 941 0.98

15 18 0.00033 0.043 15.3 9.5 1 23 947 970 947 970 0.95

16 18 0.00028 0.037 15.6 0.5 1 23 976 998 976 998 0.97

17 18 0.0004 0.053 15.0 4.5 1 23 1008 1030 1008 1030 0.98

18 18 1.5e-05 0.0019 19.6 1.6 1 23 1036 1059 1036 1059 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	4.8e-05	0.0063	17.9	1.7	1	23	555	577	555	577	0.97
2	18	1.5e-05	0.0019	19.6	0.4	1	23	583	605	583	605	0.97
3	18	0.0012	0.16	13.5	0.5	1	23	611	633	611	633	0.95
4	18	2.4e-05	0.0032	18.9	3.1	1	23	639	661	639	661	0.97
5	18	5.5e-05	0.0072	17.8	4.7	1	23	667	689	667	689	0.99
6	18	0.0001	0.013	16.9	5.7	1	23	695	717	695	717	0.97
7	18	4.9e-07	6.5e-05	24.2	4.3	1	23	723	745	723	745	0.98
8	18	1.8e-07	2.3e-05	25.6	2.4	1	23	751	773	751	773	0.97
9	18	0.0001	0.014	16.9	6.7	1	23	779	801	779	801	0.97
10	18	3e-05	0.0039	18.6	6.5	1	23	807	829	807	829	0.98
11	18	5e-06	0.00066	21.0	4.5	1	23	835	857	835	857	0.98
12	18	1.9e-05	0.0024	19.2	7.1	1	23	863	885	863	885	0.98
13	18	9.4e-06	0.0012	20.2	7.6	1	23	891	913	891	913	0.97
14	18	1.1e-06	0.00014	23.2	7.7	1	23	919	941	919	941	0.98
15	18	0.00033	0.043	15.3	9.5	1	23	947	970	947	970	0.95
16	18	0.00028	0.037	15.6	0.5	1	23	976	998	976	998	0.97
17	18	0.0004	0.053	15.0	4.5	1	23	1008	1030	1008	1030	0.98
18	18	1.5e-05	0.0019	19.6	1.6	1	23	1036	1059	1036	1059	0.96

Sequence Information

Coding Sequence: ATGAATAGTGAACATGCAACAGTAAAAGCAACTCCTGGTGAGTCAGCGAAAGCCACAATTACTGTTGCCACAGCTAATGAATTGAATCGACaatatcaacaacagcaacgacatTCACCACAGCAACATATTAACAATTCTCACCATTTGCAGCAgctacaattgcaacaacaacaacaacaaacacaaaatcaTCAACTGAACGAGCCACAACAAAATCGAAGACTACAAACAGCtcaacaacaattgcagttGCAGCAGTCGCAGCAGCAGAGTAATTCAATGTCGTTAAACAGTGGTAGTGGTGGGGTTGGTGGTGCTGCCAATGCCATAGCAACAACCCCTTCCTCTATAGCCACTGTCACCGTCGGTGCTGGAGGCGGCATGATTGGTAATGCTGTAATACCAATGGCAGCACCAGTCCAGCATCAGCCAGTTTCAATGGACACTGTTACGGCAGAGACAATTGCGGCCGCTGCAGCTGGAGGTGGCACTCCGACCACCCTAACCACGACTCCTGTAACAATCGGTGGTCTGAGCATAAGTGTCACGAATCCTGCAGCTGTCGTTACTGGCAATATTGCTGACACAAAGATAGGGCAACCGGCATTGCAACAGCACCAACAGCAAacacatcagcagcagcaaacaaTAAGCTCAACTGGAGTCACAGTAGCAACGGCATCAACTACATCAACTGCACTATTGACAAATGCACCAAACttgagCAAATATTGGGTAGTTTCAAATGGCCAAGCGCTTCCCTATAATATTTTGCCAAATGGAACTATAATCACACAACATCAGCGGCAGCAAGCAACGGACCAGGATACACATTCACAACAACAAgttcaactgcaacaacaacaacagcagcagcaaacaaatacattacaaattcacgCTGCGGTAAATGCAAGTGATGAcaatcgacaacaacaacaacatgtaccGCAACAACATCTAACTGCCGCTTTGCAGCAGGCACAgcaaactcaacaacaacaacagcagcagccacaacaacaacaactcctgCAACGAGAAAATATTAAGGAGGAGAAACCATTTTTAGATAACGGAAAGCTAAATCAATCCATAGTTATGCAACACGTAGGCGCAACAGCTTCGTCCGCGCCGACGACGTCCGGTGCCACAACCATAACTCTGGGTGCACCGAAAACCGAAGTAAAAGATGATGTTGGATTGGGTAAACCGCCCATTGAAATGTATAAAGTTAACATTGAAGACTTCTCGCAGCTTTTTACCTATCATGAAGTGTTTGGTAAAATCCACGGTGATGTAATGAATCAAGCCGCACATGCAGTGCCCAATGCTGCACCACCACCGCACACTAACGCGAGCAACAATGCAGCGGTTGCGGCTGTAGTGGCTAGCGCTAATGCGGCcgctgctgcagctgctgccGCTGCGACAGCCGCAAATACAACAAGCGGTGTGGTAGCGCCCACAACTACAACCAATTTAACGACGGCAATCAGCACAAGTGGCACCACGACTGCCCCCGCTACTGCTGTAACAGCAACGCCAACTGTGACCGGGGAGCTATTGATGCCCAAAATGGAAGGTGGCCTGCCGGTTGTGGATCAGACGACAACCATCGCGCTCGCACCTGATGGCACACCAATTGCTACTGGTACACATGTGTGCGATATTTGCGGCAAAATATTCCAATTTCGCTATCAATTGATCGTGCATCGCCGTTATCATAGTGAACGGAAACCATTCAATTGTCAGGTGTGTGGACAAGGTTTCACCACCTCACAAGATTTAACGCGGCATGGGAAGATACACATCGGCGGACCAATGTTTACGTGCATCGTTTGTTTCAATGTATTCGCCAACAATGCAAGTCTGGAGCGGCATATGAAACGACATTCGACCGATAAGCCATTCGCATGTACGATCTGTCAGAAGACATTTGCACGCAAGGAGCATTTGGATAACCATTTTCGTTCGCATACGGGCGAGACGCCGTTCCGGTGCCAATATTGCGCCAAGACATTCACACGGAAGGAGCACATGGTGAATCATGTGCGCAAACACACGGGTGAGACGCCACATCGTTGCGATATTTGTAAGAAGTCCTTCACCCGCAAGGAACACTATGTTAACCACTACATGTGGCACACTGGTCAAACACCCCACCAGTGTGATGTATGTGGCAAGAAGTATACGCGCAAAGAGCATCTAGCTAATCATATGCGTTCACACACTAATGACACACCCTTTAGATGTGAGATATGCGGCAAGAGTTTTAGTCGCAAGGAGCATTTCACCAATCACATTCTCTGGCATACAGGCGAAACACCTCATCGTTGCGATTTCTGCTCGAAAACGTTTACGCGCAAGGAACACTTGCTAAATCATGTACGTCAACATACGGGCGAATCGCCTCATCGTTGCACATATTGTTTGAAAACGTTCACACGCAAGGAACACCTAGTGAATCATATACGTCAACATACGGGCGAAACACCGTTCAAATGCACTTATTGCACGAAGGCATTTACGCGTAAAGATCATATGGTGAATCATATTAGGCAGCATACCGGAGAATCTCCGCACAAGTGCACATACTGCACAAAAACGTTTACACGTAAGGAACATCTGGTAAATCATGTGCGTCAGCATACTGGCGAGTCGCCACATCGTTGCAGTTACTGCAAGAAGACCTTTACACGCAAGGAGCATTTGACGAATCATGTGCGTTTGCATACTGGCGATTCACCGCACAAATGTGAATATTGCCAAAAGACATTTACGCGTAAAGAGCATTTGAACAATCATATGCGTCAGCACTCTAGCGACAATCCACATTGTTGCAATGTGTGCAACAAGCCATTCACACGTAAAGAGCATCTTATTAATCACATGTCACGTTGCCACACTGGTGATCGTCCGTTCGCTTGTGAGACTTGTGGTAAATCGTTCCCACTCAAGGGAAATCTGTTATTCCATCAACGTAGTCACACTAAAGGACAGGAATGTGAACGTCCGTTTTCATGCGAGAAATGTCCCAAAACCTTTATATGCAAGgGTCATCTTGTCTCACATATGCGTTCGCATTCAGGTGAGAAGCCGCACGCCTGCACATTGTGCAGCAAGGCTTTTGTTGAGCGTGGCAATTTGAAGCGCCACATGAAGATGAACCATCCCGATGCGGTAATGCCCCCACCACCGCAACCGCATCCGCAAATTCCAGCTGGTATATTGGCGTCGGTCAAAGAGGAAATAAAACCAATATTTCTTCCCCATCAAACGCCGACCATGCACACTATCCAACAGATAACATCGGGCGCAGCAGCGGCAAACGCCGTGCAGTTGGCCCCTAGTCTTGTGCCGTTGGTTACCTCAACTATAACTTCGCACAATAACCAGAaaccacagcagcaacaacaacaacaacaacaacagcagcagcagcagcaacaacaacaacagcaagcacatcaacaacaccaacaacaggtgcagcagcaacaacagcaacaacatcaacagcagcagcagcaacaacaacagcagcaactacTACAACTATCCATACATCAACAACAGCAGGAACAACATCGtcaacatcagcaacaacaacaacaggcgcaTCACCAACAAACACAGGTGCAGGCACAACAACAAGCTCATGCACCTCAACCGCAACAACCGCCAACTGTGCCTATCGCACTCATACAAACCGATCCGAGCGTGTTGGCTCGTGCAGCCATGCAGTTGCAACACTTGCCAGCGAATGTCGAGCAACATCCGGTGGTTTACTAA
Protein Sequence: MNSEHATVKATPGESAKATITVATANELNRQYQQQQRHSPQQHINNSHHLQQLQLQQQQQQTQNHQLNEPQQNRRLQTAQQQLQLQQSQQQSNSMSLNSGSGGVGGAANAIATTPSSIATVTVGAGGGMIGNAVIPMAAPVQHQPVSMDTVTAETIAAAAAGGGTPTTLTTTPVTIGGLSISVTNPAAVVTGNIADTKIGQPALQQHQQQTHQQQQTISSTGVTVATASTTSTALLTNAPNLSKYWVVSNGQALPYNILPNGTIITQHQRQQATDQDTHSQQQVQLQQQQQQQQTNTLQIHAAVNASDDNRQQQQHVPQQHLTAALQQAQQTQQQQQQQPQQQQLLQRENIKEEKPFLDNGKLNQSIVMQHVGATASSAPTTSGATTITLGAPKTEVKDDVGLGKPPIEMYKVNIEDFSQLFTYHEVFGKIHGDVMNQAAHAVPNAAPPPHTNASNNAAVAAVVASANAAAAAAAAAATAANTTSGVVAPTTTTNLTTAISTSGTTTAPATAVTATPTVTGELLMPKMEGGLPVVDQTTTIALAPDGTPIATGTHVCDICGKIFQFRYQLIVHRRYHSERKPFNCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNASLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCTYCLKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHIRQHTGESPHKCTYCTKTFTRKEHLVNHVRQHTGESPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLLFHQRSHTKGQECERPFSCEKCPKTFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAVMPPPPQPHPQIPAGILASVKEEIKPIFLPHQTPTMHTIQQITSGAAAANAVQLAPSLVPLVTSTITSHNNQKPQQQQQQQQQQQQQQQQQQQQAHQQHQQQVQQQQQQQHQQQQQQQQQQQLLQLSIHQQQQEQHRQHQQQQQQAHHQQTQVQAQQQAHAPQPQQPPTVPIALIQTDPSVLARAAMQLQHLPANVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01358224;
90% Identity: iTF_00193723;
80% Identity: -